17259
AFSC/ABL: 2006 Sockeye genetics
AFSC/ABL: 2006 Sockeye genetics
Data Set
Published / External
12324
Auke Bay Laboratories
Project
Completed
Unknown
The purpose of this study was to genetically analyze axillary process samples from ~6,000 sockeye salmon harvested in the 2006 and 2007 Districts 101 gillnet and 104 purse seine sockeye fisheries to determine proportions of Canadian and U.S. fish. A SNP genetic baseline of 45 SNPs (41 markers as 3 groups of SNPs are linked) assayed in 84 sockeye populations from southeast Alaska and British Columbia was developed by the ADF&G. The 84 populations were grouped into 14 regions. With the exception of locus One_Serpin, which failed during genotyping, the same markers were evaluated in the baseline and mixtures. Stock proportions were estimated using a Bayesian mixture analysis. In addition to performing mixture analysis for the 2006 and 2007 fisheries, the sockeye baseline was also expanded as part of the 2007 project. Approximately 1700 fish from 21 locations were genotyped, which will be included in a future updated baseline.
This dataset contains the genotype information for approximately 1700 fish from 21 locations to determine proportions of Canadian and U.S. fish.
Loaded by batch 3875, 12-18-2012 18:09
Theme
ISO 19115 Topic Category
biota
Spatial
Geographic Names Information System
Alaska
Auke Bay Laboratories
Juneau
AK
US
Data Set
Excel and SAS Dataset
None Planned
Document (digital)
For scientific, management, and regulation compliance purposes, these data are confidential under the Magnuson-Stevens Fishery Conservation and Management Act; as amended, Public Law 109-479; 16 U.S.C. 1953; implemented at 50 CFR 679.50. Therefore unprocessed (raw) data can be shared only with authorized persons; however aggregated forms of the data are generally available.
unknown
unknown
unknown
Data Steward
2015-10-01
Person
Guthrie, Chuck
chuck.guthrie@noaa.gov
Distributor
2012-12-18
Person
Guthrie, Chuck
chuck.guthrie@noaa.gov
Metadata Contact
2012-12-18
Person
Fergusson, Emily A
emily.fergusson@noaa.gov
17109 Pt Lena Loop Road
Juneau
AL
907-789-6613
Originator
2012-12-18
Person
Guthrie, Chuck
chuck.guthrie@noaa.gov
Point of Contact
2012-12-18
Person
Guthrie, Chuck
chuck.guthrie@noaa.gov
Ground Condition
-137.71
-131.802
58.367
55.115
Southeast Alaska
Discrete
2006
Unclassified
N/A
For scientific, management, and regulation compliance purposes, these data are confidential under the Magnuson-Stevens Fishery Conservation and Management Act; as amended, Public Law 109-479; 16 U.S.C. 1953; implemented at 50 CFR 679.50. Therefore unprocessed (raw) data can be shared only with authorized persons; however aggregated forms of the data are generally available.
User must read and fully comprehend the metadata prior to use. Data should not be used beyond the limits of the source scale. Acknowledgement of NOAA, as the source from which these data were obtained, in any publications and/or other representations of these data is suggested.
https://www.ncei.noaa.gov/
NCEI to be determined
Microsoft Excel spreadsheet
None
Contact the dataset POC for full QA/QC methodology
Yes
Unknown
Yes
Yes
yes
unknown
no delay
To Be Determined
unknown
IT Security and Contingency Plan for the system establishes procedures and applies to the functions, operations, and resources necessary to recover and restore data as hosted in the Western Regional Support Center in Seattle, Washington, following a disruption.
Contact POC for full methodology
gov.noaa.nmfs.inport:17259
Doug Turnbull
2012-12-18T18:09:44
SysAdmin InPortAdmin
2023-05-30T18:10:18
2016-05-03
Alaska Fisheries Science Center
AFSC
7600 Sand Point Way N.E., Building 4
Seattle
WA
98115
USA
http://www.afsc.noaa.gov
0700-1700 Pacific Time
1001
Public
No
2016-05-03
1 Year
2017-05-03
None
collection
multiple species
vertebrates
Empire
Biovitae
Carbon-based lifeforms
Kingdom
Animalia
Phylum
Chordata
Subphylum
Vertebrata
Superclass
Osteichthyes
Class
Actinopterygii
Subclass
Neopterygii
Infraclass
Teleostei
Superorder
Protacanthopterygii
Order
Salmoniformes
Family
Salmonidae
Subfamily
Salmoninae
Genus
Oncorhynchus
Species
nerka
Sockeye salmon