IGP2010 microbial - Bacterial community profiling at sewage treatment plant outfalls
Northwest Fisheries Science Center
Data Set
(DS)
| ID: 18567
| Published / External
Created: 2013-02-26
|
Last Modified: 2022-08-09
Project (PRJ) | ID: 17938
ID: 18567
Data Set (DS)
* Discovery• First Pass
» Metadata Rubric
Item Identification
* » Title | IGP2010 microbial - Bacterial community profiling at sewage treatment plant outfalls |
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Short Name | IGP2010 microbial (Bacterial community profiling at sewage treatment plant outfalls) |
* Status | Completed |
Creation Date | 2010-05-01 |
Revision Date | |
• Publication Date | 2019-06-03 |
* » Abstract |
Penn Cove (in the Whidbey Basin) is designated as a category 5, 303d impaired water body due to low dissolved oxygen. In addition to runoff from adjacent developed and agricultural lands, treated effluent from two sewage treatment plants (STPs) and freshwater from the nearby Skagit River flow into Penn Cove. This project investigates the structure and function of microbial communities in the context of inorganic nutrients and physical parameters to assess any detectable influence of STPs. Work is conducted by NOAA personnel with assistance from undergraduate research interns. Data collected across four different seasons include bacterial/archeal abundance (biomass), heterotrophic production (productivity), bacterial diversity, chlorophyll A, inorganic nutrient concentrations, dissolved oxygen concentration, and seawater temperature. Anticipated products are presentations at scientific meetings related to marine dissolved oxygen and to local management authorities (e.g., county government) as well as publication in the referred literature. The project is a seed project to develop further capacity to assess additional low dissolved oxygen sites. FileMaker Pro of field & lab analyses. |
* Purpose |
Raw/field data, Laboratory data |
Notes |
Loaded by batch 4461, 02-26-2013 13:18 |
Other Citation Details | |
• Supplemental Information |
Subject to Public Access to Research Results (PARR): Yes Peer Reviewed Publication: Microbial assessments of a marine bay with chronic low dissolved oxygen. manuscript describing study Presentation: Profiling microbial features in a Whidbey Basin bay with low dissolved oxygen. Salish Sea Ecosystem Conference, Vancouver BC Presentation: Looking closer to home: microbial ecology studies in Puget Sound. Oceans & Human Health seminar series Presentation: Profiling microbial features in a marine bay with chronic low dissolved oxygen. Keystone Symposia: Microbial Communities as Drivers of Ecosystem Diversity; Breckenridge, CO Report: Final report to Internal Grants Program. Final report on project to funding source |
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Keywords
Theme Keywords
Thesaurus | Keyword |
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None | bacterial communities |
None | chlorophyll A |
None | heterotrophic production |
None | low dissolved oxygen |
None | marine microbes |
None | microbial abundance |
None | nutrients |
None | Puget Sound |
Temporal Keywords
Thesaurus | Keyword |
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* Spatial Keywords
Thesaurus | Keyword |
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None | Penn Cove & Saratoga Passage |
Stratum Keywords
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Instrument Keywords
Thesaurus | Keyword |
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None | DNA Sequencer |
None | GPS |
None | Quantitative PCR Machine |
None | Sonde and Probe |
None | Unknown Instrument |
Platform Keywords
Thesaurus | Keyword |
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None | Water Sampler Bottle - Niskin Bottle |
Physical Location
• » Organization | Northwest Fisheries Science Center |
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• » City | Seattle |
• » State/Province | WA |
• Country | USA |
• » Location Description |
Data Set Information
* Data Set Scope Code | Data Set |
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• Data Set Type | Other |
• Maintenance Frequency | |
Maintenance Note | |
» Data Presentation Form | Other |
• Entity Attribute Overview | |
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Data Set Credit |
Support Roles
* » Support Role | Data Steward |
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* » Date Effective From | 2015-10-01 |
Date Effective To | |
Person | Rhodes, Linda D |
Address |
2725 Montlake Blvd East Seattle, WA 98112 |
Email Address | Linda.Rhodes@noaa.gov |
Phone | 206-860-3279 |
Fax | 206-860-3467 |
Mobile | |
URL | |
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Contact Instructions |
* » Support Role | Distributor |
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* » Date Effective From | 2015-10-01 |
Date Effective To | |
Organization | Northwest Fisheries Science Center (NWFSC) |
Address |
2725 Montlake Boulevard East Seattle, WA 98112 USA |
Email Address | nmfs.nwfsc.metadata@noaa.gov |
Phone | 206-860-3200 |
Fax | |
Mobile | |
URL | http://www.nwfsc.noaa.gov |
Business Hours | |
Contact Instructions |
* » Support Role | Metadata Contact |
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* » Date Effective From | 2015-10-01 |
Date Effective To | |
Organization | Northwest Fisheries Science Center (NWFSC) |
Address |
2725 Montlake Boulevard East Seattle, WA 98112 USA |
Email Address | nmfs.nwfsc.metadata@noaa.gov |
Phone | 206-860-3200 |
Fax | |
Mobile | |
URL | http://www.nwfsc.noaa.gov |
Business Hours | |
Contact Instructions |
* » Support Role | Originator |
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* » Date Effective From | 2015-10-01 |
Date Effective To | |
Person | Rhodes, Linda D |
Address |
2725 Montlake Blvd East Seattle, WA 98112 |
Email Address | Linda.Rhodes@noaa.gov |
Phone | 206-860-3279 |
Fax | 206-860-3467 |
Mobile | |
URL | |
Business Hours | |
Contact Instructions |
* » Support Role | Point of Contact |
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* » Date Effective From | 2015-10-01 |
Date Effective To | |
Person | Rhodes, Linda D |
Address |
2725 Montlake Blvd East Seattle, WA 98112 |
Email Address | Linda.Rhodes@noaa.gov |
Phone | 206-860-3279 |
Fax | 206-860-3467 |
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Extents
Currentness Reference |
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Extent Group 1
Extent Description |
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Extent Group 1 / Geographic Area 1
* » W° Bound | -122.735 |
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* » E° Bound | -122.3647 |
* » N° Bound | 48.4585 |
* » S° Bound | 48.015 |
* » Description |
Penn Cove & Saratoga Passage |
Extent Group 1 / Vertical Extent
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Extent Group 1 / Time Frame 1
* » Time Frame Type | Range |
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* » Start | 2010-04-01 |
End | 2011-08-31 |
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Access Information
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* » Security Class | Unclassified |
* Security Classification System | |
Security Handling Description | |
• Data Access Policy | |
» Data Access Procedure |
At this time, contact the Data Manager for information on obtaining access to this data set. In the near future, the NWFSC will strive to provide all non-sensitive data resources as a web service in order to meet the NOAA Data Access Policy Directive (https://nosc.noaa.gov/EDMC/PD.DA.php). |
• » Data Access Constraints |
NA |
• Data Use Constraints | |
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Distribution Information
Start Date | 2019-06-03 |
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End Date | Present |
» Download URL | https://www.webapps.nwfsc.noaa.gov/PARR/EFS_Rhodes_2016_IGP2010_QAQC.xlsx |
Distributor | Northwest Fisheries Science Center (NWFSC) (2015-10-01 - Present) |
File Name | IGP2010 microbial |
Description |
Bacterial community profiling at sewage treatment plant outfalls in Penn Cove & Saratoga Passage in the Whidbey Basin, WA from April 2010 to August 2011 |
File Date/Time | |
File Type (Deprecated) | |
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Review Status |
Start Date | 2019-06-03 |
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End Date | Present |
» Download URL | https://www.webapps.nwfsc.noaa.gov/apex/parrdata/inventory/tables/table/igp2010_microbial |
Distributor | Northwest Fisheries Science Center (NWFSC) (2015-10-01 - Present) |
File Name | IGP2010 microbial |
Description |
Bacterial community profiling at sewage treatment plant outfalls in Penn Cove & Saratoga Passage in the Whidbey Basin, WA from April 2010 to August 2011 |
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URLs
URL | https://www.webapps.nwfsc.noaa.gov/apex/parrdata/inventory/datasets/dataset/270 |
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Name | IGP2010 microbial |
URL Type | Online Resource |
File Resource Format | Web site |
Description |
NWFSC Dataset Information page. FileMaker Pro of field & lab analyses |
URL | https://www.webapps.nwfsc.noaa.gov/PARR/EFS_Rhodes_2016_IGP2010_QAQC.xlsx |
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Name | https://www.webapps.nwfsc.noaa.gov/PARR/EFS_Rhodes_2016_IGP2010_QAQC.xlsx |
URL Type | Online Resource |
File Resource Format | Web site |
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FileMaker Pro of field & lab analyses |
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» Quality Control Procedures Employed |
These data were collected and processed in accordance with established protocols and best practices under the direction of the project’s Principal Investigator. Contact the dataset Data Manager in section 3 for full QA/QC methodology. |
Data Management
» Have Resources for Management of these Data Been Identified? | No |
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» Approximate Percentage of Budget for these Data Devoted to Data Management | 0 |
» Do these Data Comply with the Data Access Directive? | Yes |
» Is Access to the Data Limited Based on an Approved Waiver? | No |
» If Distributor (Data Hosting Service) is Needed, Please Indicate | No |
» Approximate Delay Between Data Collection and Dissemination | 0 days |
» If Delay is Longer than Latency of Automated Processing, Indicate Under What Authority Data Access is Delayed |
No Delay |
» Actual or Planned Long-Term Data Archive Location | To Be Determined |
» If To Be Determined, Unable to Archive, or No Archiving Intended, Explain |
NA |
» Approximate Delay Between Data Collection and Archiving | 365 |
» How Will the Data Be Protected from Accidental or Malicious Modification or Deletion Prior to Receipt by the Archive? |
The Northwest Fisheries Science Center facilitates backup and recovery of all data and IT components which are managed by IT Operations through the capture of static (point-in-time) backup data to physical media. Once data is captured to physical media (every 1-3 days), a duplicate is made and routinely (weekly) transported to an offsite archive facility where it is maintained throughout the data's applicable life-cycle. |
Lineage
» Lineage Statement |
Volumetric calculations and decay calculations were employed. These data were collected and processed in accordance with established protocols and best practices under the direction of the project’s Principal Investigator. Contact the dataset Data Manager for full QA/QC methodology. |
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Citation Title | NWFSC Annual Project Planning System |
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Citation URL | http://www.webapps.nwfsc.noaa.gov/270 |
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Catalog Details
Catalog Item ID | 18567 |
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Metadata Record Created By | SysAdmin InPortAdmin |
Metadata Record Created | 2013-02-26 13:18+0000 |
Metadata Record Last Modified By | SysAdmin InPortAdmin |
» Metadata Record Last Modified | 2022-08-09 17:11+0000 |
Metadata Record Published | 2019-06-04 |
Owner Org | NWFSC |
Metadata Publication Status | Published Externally |
Do Not Publish? | N |
Metadata Workflow State | Published / External |
Metadata Last Review Date | 2019-06-04 |
Metadata Review Frequency | 1 Year |
Metadata Next Review Date | 2020-06-04 |
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