<?xml version="1.0" encoding="UTF-8"?>
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                 source="https://www.fisheries.noaa.gov">
   <item-identification>
      <catalog-item-id>20575</catalog-item-id>
      <title>CBOS damage assessment on Pacific herring - Toxicity of petroleum hydrocarbons (PAHs) to fish early life stages</title>
      <short-name>CBOS damage assessment on Pacific herring (Toxicity of petroleum hydrocarbons (PAHs) to fish early life stages)</short-name>
      <catalog-item-type>Data Set</catalog-item-type>
      <metadata-workflow-state ccs-id="9">Published / External</metadata-workflow-state>
      <parent-catalog-item-id>20543</parent-catalog-item-id>
      <parent-title>Migrated from Environmental Conservation Division Legacy Data Sets</parent-title>
      <parent-catalog-item-type>Project</parent-catalog-item-type>
      <status>In Work</status>
      <creation-date>2008-12-01</creation-date>
      <abstract>The Ecotox Program is at the forefront, nationally and internationally, of targeted research to characterize the impacts of petroleum hydrocarbons on NOAA trust resources, particularly fish early life stages. This work is extending lessons learned from the Exxon Valdez oil spill in Alaska, through the Cosco Busan spill in San Francisco Bay, to an array of current and intensive activities associated with the Deepwater Horizon natural resource damage assessment in the Gulf of Mexico. This research has been particularly influential in recent years (PNAS papers in 2011 and 2012), with major Deepwater papers forthcoming in 2012 and 2013. Funding has come from NOS/ORR, the Oiled Wildlife Care Network, the Prince William Sound Regional Citizen's Advisory Council, the San Francisco Estuary Institute, and other sources. Ecotox is currently developing new tools to assess PAH exposure and toxicity in fish and other animals, with national applicability - e.g., in advance of anticipated oil drilling in the Arctic, beginning in the summer of 2012.
3 year study of effects of the Cosco Busan oil spill. Morphology, heart rate, hatching rate data of Pacific herring planted at oil and reference sites and correlating herring spawns at these sites. This work supports NOAA’s Damage Assessment, Remediation, and Restoration Program (DARRP).</abstract>
      <purpose>Addresses Legal Mandate
Laboratory data</purpose>
      <notes>Loaded by FGDC Metadata Uploader, batch 4701, 09-05-2013 18:07

</notes>
      <supplemental-information>Subject to Public Access to Research Results (PARR): No: Data Not Yet Collected
			Peer Reviewed Publication: Incardona, J.P., Vines, C.A.,  and Scholz, N.L. (2012) Unexpectedly high rates of early life stage mortality among herring spawned in the 2007 Cosco Busan oil spill impact zone in San Francisco Bay. Proceedings of the National Academy of Sciences, 109(2):E51-58.. 
			Peer Reviewed Publication: Incardona, J.P., Vines, C.A., Linbo, T.L., Myers, M.S., Labenia, J.S., French, B.L., Olson, O.P., Sol, S.Y., Willis, M.L., Jarvis, M., Newman, J., Meeks, D. Menard, K., Sloan, C.A., Baldwin, D.H., Ylitalo, G.M., Collier, T.K., Cherr, G.N. and Scholz, N.L. (2012) Potent photoxicity of marine bunker oil to translucent herring embryos after prolonged weathering. Public Library of Science ONE, 7(2): e30116. doi:10.1371/journal.pone.0030116.. 
			Peer Reviewed Publication: Incardona, J.P., Carls, M.G., Day, H.L., Sloan, C.A., Bolton, J.L., Collier, T.K., and Scholz N.L. (2009). Cardiac arrhythmia is the primary response of embryonic Pacific herring (Clupea pallasi) exposed to crude oil during weathering. Environmental Science and Technology, 43:201-207.. 
			Peer Reviewed Publication: Hicken, C.L., Linbo, T.L., Baldwin, D.W., Willis, M.L., Myers, M.S., Holland, L., Larsen, M., Stekoll, M.S., Rice, S.D., Collier, T.K., Scholz, N.L., and Incardona, J.P. (2011). Sublethal exposure to crude oil during embryonic development alters cardiac morphology and reduces aerobic capacity in adult fish. Proceedings of the National Academy of Sciences, 108:7086-7090.. 
			Peer Reviewed Publication: Incardona, J.P., Linbo, T.L., and Scholz, N.L. (2011). Cardiac toxicity of 5-ring polycyclic aromatic hydrocarbons is differentially dependent on the aryl hydrocarbon receptor 2 isoform during zebrafish development. Toxicology and Applied Pharmacology, 257:242-249.. 
			Peer Reviewed Publication: Incardona, J.P., Carls, M.G., Teraoka, H., Sloan, C.A., Collier, T.K., and Scholz, N.L. (2005). Aryl hydrocarbon receptor-independent toxicity of weathered crude oil during fish development. Environmental Health Perspectives, 113:1755-1762.. 
			Peer Reviewed Publication: Carls, M.G., Holland, L., Larsen, M., Collier, T.K., Scholz, N.L., and Incardona, J.P. (2008). Fish embryos are damaged by dissolved PAHs, not oil particles. Aquatic Toxicology, 88:121-127.. 
			Peer Reviewed Publication: Hatlen, K., Sloan, C.A., Burrows, D.G., Collier, T.K., Scholz, N.L., and Incardona, J.P. (2010). Natural sunlight and residual fuel oils are a lethal combination for fish embryos. Aquatic Toxicology, 99:56-64.. 
			Peer Reviewed Publication: Incardona, J.P., Collier, T.K., and Scholz, N.L. (2011). Oil spills and fish health: exposing the heart of the matter. Journal of Exposure Science and Environmental Epidemiology, 21:3-4.. 
			Peer Reviewed Publication: Incardona, J.P., Collier, T.K., and Scholz, N.L. (2004). Defects in cardiac function precede morphological abnormalities in fish embryos exposed to polycyclic aromatic hydrocarbons. Toxicology and Applied Pharmacology, 196:191-205.. 
			Peer Reviewed Publication: Incardona, J.P., Day, H.L., Collier, T.K., and Scholz, N.L. (2006). Developmental toxicity of 4-ring polycyclic aromatic hydrocarbons in zebrafish is differentially dependent on AH receptor isoforms and hepatic cytochrome P4501A metabolism. Toxicology and Applied Pharmacology, 217:308-321..</supplemental-information>
   </item-identification>
   <keywords>
      <keyword controlled="No">
         <keyword-type>Theme</keyword-type>
         <thesaurus>PARR Exclusion</thesaurus>
         <keyword>Obsolete</keyword>
      </keyword>
      <keyword controlled="No">
         <keyword-type>Theme</keyword-type>
         <keyword>early development of fish</keyword>
      </keyword>
      <keyword controlled="No">
         <keyword-type>Theme</keyword-type>
         <keyword>marine fishes</keyword>
      </keyword>
      <keyword controlled="No">
         <keyword-type>Theme</keyword-type>
         <keyword>oil spill-related contaminants</keyword>
      </keyword>
      <keyword controlled="No">
         <keyword-type>Spatial</keyword-type>
         <keyword>Gulf of Mexico</keyword>
      </keyword>
      <keyword controlled="No">
         <keyword-type>Spatial</keyword-type>
         <keyword>NWFSC Montlake, Seattle, WA</keyword>
      </keyword>
      <keyword controlled="No">
         <keyword-type>Spatial</keyword-type>
         <keyword>San Francisco Bay, Sausalito, CA</keyword>
      </keyword>
      <keyword controlled="No">
         <keyword-type>Instrument</keyword-type>
         <keyword>92372</keyword>
      </keyword>
   </keywords>
   <physical-location>
      <organization>Northwest Fisheries Science Center</organization>
      <city>Seattle</city>
      <state-province>WA</state-province>
      <country>USA</country>
   </physical-location>
   <data-set-information>
      <data-set-scope-code>Data Set</data-set-scope-code>
      <data-set-type>Spreadsheet</data-set-type>
      <data-presentation-form>Table (digital)</data-presentation-form>
      <instrument>92372</instrument>
      <platform>92492</platform>
      <physical-collection-fishing-gear>Not Applicable</physical-collection-fishing-gear>
   </data-set-information>
   <entity-attribute-information partial-listing="No" total-count="0"/>
   <support-roles>
      <support-role cc-id="854591" in-effect="Yes">
         <support-role-type>Data Steward</support-role-type>
         <from-date>2025</from-date>
         <contact-type>Person</contact-type>
         <contact-name>Linbo, Tiffany</contact-name>
         <contact-email>tiffany.linbo@noaa.gov</contact-email>
         <contact-address>2725 Montlake Blvd East, Bldg. EAST,</contact-address>
         <contact-address-city>Seattle</contact-address-city>
         <contact-address-state>WA</contact-address-state>
         <contact-address-zip>98112</contact-address-zip>
      </support-role>
      <support-role cc-id="854592" in-effect="Yes">
         <support-role-type>Distributor</support-role-type>
         <from-date>2015-01-01</from-date>
         <contact-type>Organization</contact-type>
         <contact-name>Northwest Fisheries Science Center</contact-name>
         <contact-noaa-acronym>NWFSC</contact-noaa-acronym>
         <contact-email>nmfs.nwfsc.metadata@noaa.gov</contact-email>
         <contact-ror>https://ror.org/05r7z1k40</contact-ror>
         <contact-address>2725 Montlake Boulevard East</contact-address>
         <contact-address-city>Seattle</contact-address-city>
         <contact-address-state>WA</contact-address-state>
         <contact-address-zip>98112</contact-address-zip>
         <contact-address-country>USA</contact-address-country>
         <contact-phone-number>206-860-3200</contact-phone-number>
         <contact-url>https://www.nwfsc.noaa.gov</contact-url>
         <contact-url-name>NWFSC Home</contact-url-name>
         <contact-url-function>Online Resource</contact-url-function>
      </support-role>
      <support-role cc-id="854590" in-effect="Yes">
         <support-role-type>Metadata Contact</support-role-type>
         <from-date>2025</from-date>
         <contact-type>Person</contact-type>
         <contact-name>Bolton, Jennie L</contact-name>
         <contact-email>Jennie.Bolton@noaa.gov</contact-email>
         <contact-address>2725 Montlake Boulevard East</contact-address>
         <contact-address-city>Seattle</contact-address-city>
         <contact-address-state>WA</contact-address-state>
         <contact-address-zip>98112</contact-address-zip>
         <contact-phone-number>206-860-3359</contact-phone-number>
         <contact-fax-number>206-860-3335</contact-fax-number>
      </support-role>
      <support-role cc-id="854594" in-effect="Yes">
         <support-role-type>Originator</support-role-type>
         <from-date>2015-01-01</from-date>
         <contact-type>Person</contact-type>
         <contact-name>Incardona, John</contact-name>
         <contact-email>John.Incardona@noaa.gov</contact-email>
         <contact-address>2725 Montlake Boulevard East</contact-address>
         <contact-address-city>Seattle</contact-address-city>
         <contact-address-state>WA</contact-address-state>
         <contact-address-zip>98112</contact-address-zip>
         <contact-phone-number>206-860-3347</contact-phone-number>
      </support-role>
      <support-role cc-id="854593" in-effect="Yes">
         <support-role-type>Point of Contact</support-role-type>
         <from-date>2025</from-date>
         <contact-type>Person</contact-type>
         <contact-name>Linbo, Tiffany</contact-name>
         <contact-email>tiffany.linbo@noaa.gov</contact-email>
         <contact-address>2725 Montlake Blvd East, Bldg. EAST,</contact-address>
         <contact-address-city>Seattle</contact-address-city>
         <contact-address-state>WA</contact-address-state>
         <contact-address-zip>98112</contact-address-zip>
      </support-role>
   </support-roles>
   <extents>
      <extent cc-id="854596">
         <geographic-areas>
            <geographic-area cc-id="854598">
               <west-bound>-122.3062</west-bound>
               <east-bound>-122.3062</east-bound>
               <north-bound>47.6449</north-bound>
               <south-bound>47.6449</south-bound>
               <description>NWFSC Montlake, Seattle, WA</description>
            </geographic-area>
         </geographic-areas>
         <time-frames>
            <time-frame cc-id="854597">
               <time-frame-type>Range</time-frame-type>
               <start-date-time>2008-01-01</start-date-time>
               <end-date-time>2016-01-01</end-date-time>
            </time-frame>
         </time-frames>
      </extent>
      <extent cc-id="854599">
         <geographic-areas>
            <geographic-area cc-id="854601">
               <west-bound>-122.4805</west-bound>
               <east-bound>-122.4805</east-bound>
               <north-bound>37.8551</north-bound>
               <south-bound>37.8551</south-bound>
               <description>San Francisco Bay, Sausalito, CA</description>
            </geographic-area>
         </geographic-areas>
         <time-frames>
            <time-frame cc-id="854600">
               <time-frame-type>Range</time-frame-type>
               <start-date-time>2008-01-01</start-date-time>
               <end-date-time>2010-01-01</end-date-time>
            </time-frame>
         </time-frames>
      </extent>
      <extent cc-id="854602">
         <geographic-areas>
            <geographic-area cc-id="854604">
               <west-bound>-91.8565</west-bound>
               <east-bound>-84.21</east-bound>
               <north-bound>28.7566</north-bound>
               <south-bound>23.9546</south-bound>
               <description>Gulf of Mexico</description>
            </geographic-area>
         </geographic-areas>
         <time-frames>
            <time-frame cc-id="854603">
               <time-frame-type>Range</time-frame-type>
               <start-date-time>2010-01-01</start-date-time>
               <end-date-time>2016-01-01</end-date-time>
            </time-frame>
         </time-frames>
      </extent>
   </extents>
   <access-information>
      <security-class>Unclassified</security-class>
      <data-access-procedure>Download from National Ocean Service Office of Response and Restoration</data-access-procedure>
      <data-access-constraints>NA</data-access-constraints>
   </access-information>
   <urls>
      <url cc-id="854595">
         <url>https://www.webapps.nwfsc.noaa.gov/apex/parrdata/inventory/datasets/dataset/12764</url>
         <name>CBOS damage assessment on Pacific herring</name>
         <url-type>Online Resource</url-type>
         <file-resource-format>Web site</file-resource-format>
         <description>NWFSC Dataset Information page. 3 year study of effects of the Cosco Busan oil spill. Morphology, heart rate, hatching rate data of Pacific herring planted at oil and reference sites and correlating herring spawns at these sites. This work supports NOAA’s Damage Assessment, Remediation, and Restoration Program (DARRP).</description>
      </url>
   </urls>
   <technical-environment>
      <description>Other - Hard drives</description>
   </technical-environment>
   <data-quality>
      <accuracy>Medium</accuracy>
      <quality-control-procedures>According to standard operating procedures available at (http://darrp.noaa.gov/southwest/cosco/index.html).</quality-control-procedures>
   </data-quality>
   <data-management>
      <resources-identified>Yes</resources-identified>
      <resources-budget-percentage>10</resources-budget-percentage>
      <data-access-directive-compliant>Yes</data-access-directive-compliant>
      <data-access-directive-waiver>Yes</data-access-directive-waiver>
      <hosting-service-needed>Yes</hosting-service-needed>
      <delay-collection-dissemination>0 days</delay-collection-dissemination>
      <delay-collection-dissemination-explanation>No Delay</delay-collection-dissemination-explanation>
      <archive-location>NCEI-MD</archive-location>
      <delay-collection-archive>Unknown</delay-collection-archive>
      <data-protection-plan>The Northwest Fisheries Science Center facilitates backup and recovery of all data and IT components which are managed by IT Operations through the capture of static (point-in-time) backup data to physical media. Once data is captured to physical media (every 1-3 days), a duplicate is made and routinely (weekly) transported to an offsite archive facility where it is maintained throughout the data's applicable life-cycle.</data-protection-plan>
   </data-management>
   <lineage>
      <lineage-statement>ImageJ (from NIH) was used to process images.</lineage-statement>
   </lineage>
   <catalog-details>
      <guid>gov.noaa.nmfs.inport:20575</guid>
      <metadata-record-created-by pers-id="7339">Robert Marsicek</metadata-record-created-by>
      <metadata-record-created>2013-09-05T18:07:47</metadata-record-created>
      <metadata-record-last-modified-by pers-id="0">SysAdmin InPortAdmin</metadata-record-last-modified-by>
      <metadata-record-last-modified>2026-03-04T19:17:17</metadata-record-last-modified>
      <record-published>2019-06-07</record-published>
      <owner-organization>Northwest Fisheries Science Center</owner-organization>
      <owner-organization-acronym>NWFSC</owner-organization-acronym>
      <owner-organization-address>2725 Montlake Boulevard East</owner-organization-address>
      <owner-organization-address-city>Seattle</owner-organization-address-city>
      <owner-organization-address-state>WA</owner-organization-address-state>
      <owner-organization-address-zip>98112</owner-organization-address-zip>
      <owner-organization-address-country>USA</owner-organization-address-country>
      <owner-organization-phone>206-860-3200</owner-organization-phone>
      <owner-organization-url>https://www.nwfsc.noaa.gov</owner-organization-url>
      <owner-organization-business-hours/>
      <owner-organization-group-id>1001</owner-organization-group-id>
      <publication-status>Public</publication-status>
      <limited-metadata-available>No</limited-metadata-available>
      <is-do-not-publish>No</is-do-not-publish>
      <metadata-last-review-date>2019-06-07</metadata-last-review-date>
      <metadata-review-frequency>1 Year</metadata-review-frequency>
      <metadata-next-review-date>2020-06-07</metadata-next-review-date>
   </catalog-details>
</inport-metadata>
