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Short Citation:
Northwest Fisheries Science Center, 2022: Chum and pink salmon genetics - Genetic and life history variation of southern chum and pink salmon, https://www.fisheries.noaa.gov/inport/item/20586.

Item Identification

Title: Chum and pink salmon genetics - Genetic and life history variation of southern chum and pink salmon
Short Name: Chum and pink salmon genetics (Genetic and life history variation of southern chum and pink salmon)
Status: In Work
Creation Date: 2013-08-04
Publication Date: 2017-02-07
Abstract:

The distribution of genetic and life history variation in chum (Oncorhynchus keta) and pink (O. gorbuscha) salmon in their southern range in North America is key to understanding the factors that limit their distribution and abundance there. These species have the widest natural spawning distributions for salmon across the Pacific rim, and both species are abundant north of the contiguous 48 United States. However, they become less plentiful and persistent south of Puget Sound. Chum salmon are documented to spawn as far south in North America as San Lorenzo River in California and 322 km upstream in the Sacramento River. At the turn of the 20th century chum salmon was the most abundant salmonid in streams between the Sacramento and Columbia rivers, and over a million chum salmon returned to the Columbia River as late as the 1950s, supporting a thriving commercial fishery in Tillamook Bay, Oregon. Pink salmon are less plentiful in the region but considerable numbers have run into the lower Columbia River in past decades, and they are occasionally observed in small numbers in the Trinity River, California. Currently, chum and pink salmon populations south of the Columbia River have all but vanished, and Columbia River chum salmon are now listed under the ESA as a threatened species. The demographics, genetics, and life history of these southern populations has not been well documented; this project is an attempt to collect available information on them.

Tissues collected from Washington and Oregon adult spawners and carcasses between 2009 and present for DNA extraction.

Purpose:

Raw/field data, Monitoring or sensor data, Laboratory data

Notes:

Loaded by FGDC Metadata Uploader, batch 4710, 09-09-2013 13:48

Supplemental Information:

Subject to Public Access to Research Results (PARR): Yes

Keywords

Theme Keywords

Thesaurus Keyword
UNCONTROLLED
None genetics
None life history

Spatial Keywords

Thesaurus Keyword
UNCONTROLLED
None NWFSC Montlake

Instrument Keywords

Thesaurus Keyword
UNCONTROLLED
None DNA Sequencer

Physical Location

Organization: Northwest Fisheries Science Center
City: Seattle
State/Province: WA
Country: USA

Data Set Information

Data Set Scope Code: Data Set
Data Set Type: Spreadsheet
Data Presentation Form: Table (digital)

Support Roles

Data Steward

CC ID: 848178
Date Effective From: 2015-10-01
Date Effective To:
Contact (Person): Hard, Jeff
Address: 2725 Montlake Boulevard East
Seattle, WA 98112
Email Address: Jeff.Hard@noaa.gov
Phone: 206-860-3275

Distributor

CC ID: 848179
Date Effective From: 2015-10-01
Date Effective To:
Contact (Organization): Northwest Fisheries Science Center (NWFSC)
Address: 2725 Montlake Boulevard East
Seattle, WA 98112
USA
Email Address: nmfs.nwfsc.metadata@noaa.gov
Phone: 206-860-3200
URL: NWFSC Home

Metadata Contact

CC ID: 848177
Date Effective From: 2015-10-01
Date Effective To:
Contact (Organization): Northwest Fisheries Science Center (NWFSC)
Address: 2725 Montlake Boulevard East
Seattle, WA 98112
USA
Email Address: nmfs.nwfsc.metadata@noaa.gov
Phone: 206-860-3200
URL: NWFSC Home

Originator

CC ID: 848181
Date Effective From: 2015-10-01
Date Effective To:
Contact (Person): Hard, Jeff
Address: 2725 Montlake Boulevard East
Seattle, WA 98112
Email Address: Jeff.Hard@noaa.gov
Phone: 206-860-3275

Point of Contact

CC ID: 848180
Date Effective From: 2015-10-01
Date Effective To:
Contact (Person): Hard, Jeff
Address: 2725 Montlake Boulevard East
Seattle, WA 98112
Email Address: Jeff.Hard@noaa.gov
Phone: 206-860-3275

Extents

Extent Group 1

Extent Group 1 / Geographic Area 1

CC ID: 848187
W° Bound: -122.3062
E° Bound: -122.3062
N° Bound: 47.6449
S° Bound: 47.6449
Description

NWFSC Montlake: Northwest Fisheries Science Center, Seattle, WA USA

Extent Group 1 / Time Frame 1

CC ID: 848186
Time Frame Type: Continuing
Start: 2011-10-01

Access Information

Security Class: Unclassified
Data Access Procedure:

At this time, contact the Data Manager for information on obtaining access to this data set. In the near future, the NWFSC will strive to provide all non-sensitive data resources as a web service in order to meet the NOAA Data Access Policy Directive (https://nosc.noaa.gov/EDMC/PD.DA.php).

Data Access Constraints:

NA

Distribution Information

Distribution 1

CC ID: 848183
Start Date: 2017-02-07
End Date: Present
Download URL: https://www.webapps.nwfsc.noaa.gov/apex/parr/oregon_chum_salmon_size_at_age_and_environmental_indicators/data/page/
Distributor: Northwest Fisheries Science Center (NWFSC) (2015-10-01 - Present)
File Name: Oregon Chum Salmon Size at Age and Environmental I
Description:

Time series of adult chum salmon mean size at age.

Distribution 2

CC ID: 848182
Start Date: 2017-02-07
End Date: Present
Download URL: https://www.webapps.nwfsc.noaa.gov/apex/parrdata/inventory/tables/table/oregon_chum_salmon_size_at_age_and_environmental_indicators
Distributor: Northwest Fisheries Science Center (NWFSC) (2015-10-01 - Present)
File Name: Oregon Chum Salmon Size at Age and Environmental I
Description:

Time series of adult chum salmon mean size at age.

URLs

URL 1

CC ID: 848184
URL: https://www.webapps.nwfsc.noaa.gov/apex/parrdata/inventory/datasets/dataset/10970
Name: Chum and pink salmon genetics
URL Type:
Online Resource
File Resource Format: Web site
Description:

NWFSC Dataset Information page. Tissues collected from Washington and Oregon adult spawners and carcasses between 2009 and present for DNA extraction

Technical Environment

Description:

Spreadsheet

Data Quality

Accuracy:

High

Quality Control Procedures Employed:

These data were collected and processed in accordance with established protocols and best practices under the direction of the project’s Principal Investigator. Contact the dataset Data Manager in section 3 for full QA/QC methodology.

Data Management

Have Resources for Management of these Data Been Identified?: No
Approximate Percentage of Budget for these Data Devoted to Data Management: 1
Do these Data Comply with the Data Access Directive?: No
Is Access to the Data Limited Based on an Approved Waiver?: No
If Distributor (Data Hosting Service) is Needed, Please Indicate: No
Approximate Delay Between Data Collection and Dissemination: 0 days
If Delay is Longer than Latency of Automated Processing, Indicate Under What Authority Data Access is Delayed:

No Delay

Actual or Planned Long-Term Data Archive Location: NCEI-MD
Approximate Delay Between Data Collection and Archiving: 90
How Will the Data Be Protected from Accidental or Malicious Modification or Deletion Prior to Receipt by the Archive?:

The Northwest Fisheries Science Center facilitates backup and recovery of all data and IT components which are managed by IT Operations through the capture of static (point-in-time) backup data to physical media. Once data is captured to physical media (every 1-3 days), a duplicate is made and routinely (weekly) transported to an offsite archive facility where it is maintained throughout the data's applicable life-cycle.

Lineage

Lineage Statement:

Allele frequency data generated from DNA sequence

Child Items

Rubric scores updated every 15m

Rubric Score Type Title
Entity Oregon Chum Salmon Size at Age and Environmental Indicators

Catalog Details

Catalog Item ID: 20586
GUID: gov.noaa.nmfs.inport:20586
Metadata Record Created By: Robert Marsicek
Metadata Record Created: 2013-09-09 13:48+0000
Metadata Record Last Modified By: SysAdmin InPortAdmin
Metadata Record Last Modified: 2019-06-04 13:14+0000
Metadata Record Published: 2019-06-04
Owner Org: NWFSC
Metadata Publication Status: Published Externally
Do Not Publish?: N
Metadata Next Review Date: 2020-06-04