FRD tissue archive
Southwest Fisheries Science Center
Data Set
(DS)
| ID: 20690
| Published / External
Created: 2013-09-26
|
Last Modified: 2023-10-17
Parent: Genetics
Project (PRJ) | ID: 20684
Project (PRJ) | ID: 20684
ID: 20690
Data Set (DS)
* Discovery• First Pass
» Metadata Rubric
Item Identification
| * » Title | FRD tissue archive |
|---|---|
| Short Name | FRD tissue archive |
| * Status | On Going |
| Creation Date | 1997 |
| Revision Date | |
| • Publication Date | |
| * » Abstract |
The fishery genetics tissue collection has over 80,000 tissues stored in 95% ethanol representing fishes and invertebrates collected globally but with a focus on the North Pacific. These samples are focused on sharks (primarily blue, mako and common thresher), groundfish (primarily Sebastes spp.), and highly migratory species (tunas, billfish, yellowtail, opah) but also contain assorted other samples including parasites from some animals, eggs and larvae, and abalone (primarily pink abalone). |
| * Purpose |
The fishery genetics tissue collection has over 80,000 tissues stored in 95% ethanol representing fishes and invertebrates collected globally but with a focus on the North Pacific. These samples are focused on sharks (primarily blue, mako and common thresher), groundfish (primarily Sebastes spp.), and highly migratory species (tunas, billfish, yellowtail, opah) but also contain assorted other samples including parasites from some animals, eggs and larvae, and abalone (primarily pink abalone). |
| Notes | |
| Other Citation Details | |
| • Supplemental Information | |
| DOI (Digital Object Identifier) | |
| DOI Registration Authority | |
| DOI Issue Date |
Keywords
Theme Keywords
| Thesaurus | Keyword |
|---|---|
| None | abalone |
| None | anchovy |
| None | genetics |
| None | opah |
| None | rockfish |
| None | sardine |
| None | shark |
| None | tissue archive |
| None | tuna |
Temporal Keywords
| Thesaurus | Keyword |
|---|---|
* Spatial Keywords
| Thesaurus | Keyword |
|---|---|
Stratum Keywords
| Thesaurus | Keyword |
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Instrument Keywords
| Thesaurus | Keyword |
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Platform Keywords
| Thesaurus | Keyword |
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Physical Location
| • » Organization | Southwest Fisheries Science Center |
|---|---|
| • » City | La Jolla |
| • » State/Province | CA |
| • Country | USA |
| • » Location Description |
Data Set Information
| * Data Set Scope Code | Data Set |
|---|---|
| • Data Set Type | Access Database, spreadsheets |
| • Maintenance Frequency | As Needed |
| Maintenance Note | |
| » Data Presentation Form | Table (digital) |
| • Entity Attribute Overview | |
| Entity Attribute Detail Citation | |
| Entity Attribute Detail URL | |
| Distribution Liability | |
| Data Set Credit |
Support Roles
» At least one Distributor Org, one Metadata Contact, one Point of Contact, and one Data Steward should be listed.
| * » Support Role | Data Steward |
|---|---|
| * » Date Effective From | 2015 |
| Date Effective To | |
| Person | Hyde, John R |
| Address |
8901 La Jolla Shores Dr La Jolla, CA 92037 USA |
| Email Address | John.Hyde@noaa.gov |
| Phone | (858) 546-7086 |
| Fax | (858) 546-7003 |
| Mobile | |
| URL | |
| Business Hours | 8:00 AM - 4:30 PM |
| Contact Instructions |
| * » Support Role | Distributor |
|---|---|
| * » Date Effective From | 1997 |
| Date Effective To | |
| Organization | Southwest Fisheries Science Center (SWFSC) |
| Address |
8901 La Jolla Shores Dr. La Jolla, CA 92037 USA |
| Email Address | |
| Phone | (858)546-7000 |
| Fax | |
| Mobile | |
| URL | http://swfsc.noaa.gov/ |
| Business Hours | 8:00-16:30 |
| Contact Instructions |
| * » Support Role | Metadata Contact |
|---|---|
| * » Date Effective From | 2015 |
| Date Effective To | |
| Person | Hyde, John R |
| Address |
8901 La Jolla Shores Dr La Jolla, CA 92037 USA |
| Email Address | John.Hyde@noaa.gov |
| Phone | (858) 546-7086 |
| Fax | (858) 546-7003 |
| Mobile | |
| URL | |
| Business Hours | 8:00 AM - 4:30 PM |
| Contact Instructions |
| * » Support Role | Point of Contact |
|---|---|
| * » Date Effective From | 2015 |
| Date Effective To | |
| Person | Hyde, John R |
| Address |
8901 La Jolla Shores Dr La Jolla, CA 92037 USA |
| Email Address | John.Hyde@noaa.gov |
| Phone | (858) 546-7086 |
| Fax | (858) 546-7003 |
| Mobile | |
| URL | |
| Business Hours | 8:00 AM - 4:30 PM |
| Contact Instructions |
| * » Support Role | |
|---|---|
| * » Date Effective From | |
| Date Effective To | |
| * » Contact | |
| * Contact Instructions |
| * » Support Role | |
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| * » Date Effective From | |
| Date Effective To | |
| * » Contact | |
| * Contact Instructions |
| * » Support Role | |
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| * » Date Effective From | |
| Date Effective To | |
| * » Contact | |
| * Contact Instructions |
Extents
| Currentness Reference |
|---|
Extent Group 1
| Extent Description |
|---|
Extent Group 1 / Geographic Area 1
| * » W° Bound | -180 |
|---|---|
| * » E° Bound | 180 |
| * » N° Bound | 90 |
| * » S° Bound | -90 |
| * » Description |
Extent Group 1 / Vertical Extent
| EPSG Code | |
|---|---|
| Vertical Minimum | |
| Vertical Maximum |
Extent Group 1 / Time Frame 1
| * » Time Frame Type | Continuing |
|---|---|
| * » Start | 1991 |
| End | |
| Alternate Start As Of Info | |
| Alternate End As Of Info | |
| Description |
Spatial Information
Spatial Resolution
| Angular Distance | |
|---|---|
| Angular Distance Units | |
| Horizontal Distance | |
| Horizontal Distance Units | |
| Vertical Distance | |
| Vertical Distance Units | |
| Equivalent Scale Denominator | |
| Level of Detail Description |
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Spatial Representation
| Grid Representation Used? | |
|---|---|
| Vector Representation Used? | |
| Text / Table Representation Used? | |
| TIN Representation Used? | |
| Stereo Model Representation Used? | |
| Video Representation Used? |
Grid Representation
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| Transformation Parameter Available? | |||||||||||||
Axis Dimension |
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Axis Dimension |
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Vector Representation
| Topology Level | |
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| Complex Object Present? | |
| Complex Object Count | |
| Composite Object Present? | |
| Composite Object Count | |
| Curve Object Present? | |
| Curve Object Count | |
| Point Object Present? | |
| Point Object Count | |
| Solid Object Present? | |
| Solid Object Count | |
| Surface Object Present? | |
| Surface Object Count |
Reference Systems
Reference System
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Horizontal Resolution |
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Vertical Resolution |
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Access Information
| Data License | |
|---|---|
| Data License URL | |
| Data License Statement | |
| * » Security Class | Unclassified |
| * Security Classification System | |
| Security Handling Description | |
| • Data Access Policy |
There are no restrictions on access to these data. |
| » Data Access Procedure |
Contact John Hyde at John.Hyde@noaa.gov |
| • » Data Access Constraints |
There are no restrictions or prerequisites for accessing these data. |
| • Data Use Constraints | |
| Metadata Access Constraints | |
| Metadata Use Constraints |
Distribution Information
| Start Date | 1997 |
|---|---|
| End Date | Present |
| » Download URL | https://swfsc.noaa.gov/ |
| Distributor | Southwest Fisheries Science Center (SWFSC) (1997 - Present) |
| File Name | FRD Tissue Database |
| Description |
Excel file containing list of all tissues in the SWFSC FRD tissue collection |
| File Date/Time | |
| File Type (Deprecated) | SPREADSHEET (MICROSOFT EXCEL) |
| Distribution Format | XLS - Microsoft Excel |
| File Size | |
| Application Version | |
| Compression | |
| Review Status |
| Start Date | |
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| End Date | |
| » Download URL | |
| Distributor | |
| File Name | |
| Description | |
| File Date/Time | |
| File Type | |
| FGDC Content Type | |
| File Size | |
| Application Version | |
| Compression | |
| Review Status |
| Start Date | |
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| End Date | |
| » Download URL | |
| Distributor | |
| File Name | |
| Description | |
| File Date/Time | |
| File Type | |
| FGDC Content Type | |
| File Size | |
| Application Version | |
| Compression | |
| Review Status |
| Start Date | |
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| End Date | |
| » Download URL | |
| Distributor | |
| File Name | |
| Description | |
| File Date/Time | |
| File Type | |
| FGDC Content Type | |
| File Size | |
| Application Version | |
| Compression | |
| Review Status |
Archive Information
| Location | |
|---|---|
| File Identifier | |
| File Name | |
| URL | |
| Description | |
| DOI | |
| Archive Date | |
| Archive Update Frequency |
| Location | |
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| File Identifier | |
| File Name | |
| URL | |
| Description | |
| DOI | |
| Archive Date | |
| Archive Update Frequency |
| Location | |
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| File Identifier | |
| File Name | |
| URL | |
| Description | |
| DOI | |
| Archive Date | |
| Archive Update Frequency |
URLs
| URL | |
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| Name | |
| URL Type | |
| File Resource Format | |
| Description |
| URL | |
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| Name | |
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| Description |
| URL | |
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| Name | |
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| Description |
Activity Log
| Activity Time | |
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| Responsible Party | |
| Description |
| Activity Time | |
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| Activity Type | |
| Responsible Party | |
| Description |
| Activity Time | |
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| Activity Type | |
| Responsible Party | |
| Description |
Issues
| Issue Date | |
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| Author | |
| Issue |
| Issue Date | |
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| Author | |
| Issue |
| Issue Date | |
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| Author | |
| Issue |
Technical Environment
| Description |
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|---|
Data Quality
| Representativeness | |
|---|---|
| Accuracy | |
| Analytical Accuracy | |
| Horizontal Positional Accuracy | |
| Vertical Positional Accuracy | |
| Quantitation Limits | |
| Bias | |
| Comparability | |
| Completeness Measure |
Contains records for 100% of tissues in the archive. |
| Precision | |
| Analytical Precision | |
| Field Precision | |
| Sensitivity | |
| Detection Limit | |
| Completeness Report | |
| Conceptual Consistency | |
| » Quality Control Procedures Employed |
Data Management
| » Have Resources for Management of these Data Been Identified? | No |
|---|---|
| » Approximate Percentage of Budget for these Data Devoted to Data Management | Unknown |
| » Do these Data Comply with the Data Access Directive? | No |
| » Is Access to the Data Limited Based on an Approved Waiver? | No |
| » If Distributor (Data Hosting Service) is Needed, Please Indicate | |
| » Approximate Delay Between Data Collection and Dissemination | 1 year |
| » If Delay is Longer than Latency of Automated Processing, Indicate Under What Authority Data Access is Delayed | |
| » Actual or Planned Long-Term Data Archive Location | NCEI-MD |
| » Approximate Delay Between Data Collection and Archiving | 1 year |
| » How Will the Data Be Protected from Accidental or Malicious Modification or Deletion Prior to Receipt by the Archive? |
Data are stored on a server at the Southwest Fisheries Science Center which has all appropriate access controls. |
Lineage
| » Lineage Statement |
Tissue samples are stored in ethanol and archived for later use. |
|---|
Sources
| Citation Title | FRD Tissue ARchive |
|---|---|
| Contact Role Type | Originator |
| Contact Type | Person |
| Contact Name | John R. Hyde |
| Publish Date | |
| Extent Type | |
| Extent Start Date/Time | |
| Extent End Date/Time | |
| Scale Denominator | |
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| Citation URL Description | |
| Source Contribution |
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| Citation URL Description | |
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| Extent Type | |
| Extent Start Date/Time | |
| Extent End Date/Time | |
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| Citation URL Description | |
| Scale Denominator |
| Citation Title | |
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| Contact Name | |
| Publish Date | |
| Extent Type | |
| Extent Start Date/Time | |
| Extent End Date/Time | |
| Citation URL | |
| Citation URL Name | |
| Citation URL Description | |
| Scale Denominator |
Process Steps
| Process Step Number | 1 |
|---|---|
| » Description |
Organism collected. |
| Process Date/Time | |
| Process Contact | Hyde, John R |
| Phone (Voice) | (858) 546-7086 |
| Email Address | John.Hyde@noaa.gov |
| Source |
| Process Step Number | 2 |
|---|---|
| » Description |
Tissue sampled. |
| Process Date/Time | |
| Process Contact | Hyde, John R |
| Phone (Voice) | (858) 546-7086 |
| Email Address | John.Hyde@noaa.gov |
| Source |
| Process Step Number | 3 |
|---|---|
| » Description |
Tissue preserved in ethanol and archived. |
| Process Date/Time | |
| Process Contact | Hyde, John R |
| Phone (Voice) | (858) 546-7086 |
| Email Address | John.Hyde@noaa.gov |
| Source |
| Process Step Number | |
|---|---|
| » Description | |
| Process Date/Time | |
| Process Contact | |
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| Email Address | |
| Source |
| Process Step Number | |
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| » Description | |
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| Process Contact | |
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| Email Address | |
| Source |
| Process Step Number | |
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| » Description | |
| Process Date/Time | |
| Process Contact | |
| Phone (Voice) | |
| Email Address | |
| Source |
Acquisition Information
Instruments
| Instrument Unavailable Reason |
|---|
| Identifier | |
|---|---|
| Docucomp UUID | |
| Instrument / Gear | |
| Instrument Type | |
| Description |
| Identifier | |
|---|---|
| Docucomp UUID | |
| Instrument / Gear | |
| Instrument Type | |
| Description |
| Identifier | |
|---|---|
| Docucomp UUID | |
| Instrument / Gear | |
| Instrument Type | |
| Description |
Platforms
| Platform Unavailable Reason |
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| Identifier | |||||||
|---|---|---|---|---|---|---|---|
| Docucomp UUID | |||||||
| Description | |||||||
Mounted Instruments |
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| Description | |||||||
Mounted Instruments |
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Mounted Instruments |
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FAQs
| Date | |
|---|---|
| Author | |
| Question | |
| Answer |
Related Items
| Item Type | Relationship Type | Title |
|---|---|---|
Catalog Details
| Catalog Item ID | 20690 |
|---|---|
| Metadata Record Created By | Edward D Weber |
| Metadata Record Created | 2013-09-26 17:10+0000 |
| Metadata Record Last Modified By | SysAdmin InPortAdmin |
| » Metadata Record Last Modified | 2023-10-17 16:12+0000 |
| Metadata Record Published | 2019-06-19 |
| Owner Org | SWFSC |
| Metadata Publication Status | Published Externally |
| Do Not Publish? | N |
| Metadata Workflow State | Published / External |
| Metadata Last Review Date | 2019-06-19 |
| Metadata Review Frequency | 1 Year |
| Metadata Next Review Date | 2020-06-19 |
| Tags |
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