2005-present_Cetacean Biopsy Samples from the Pacific Islands Region
Pacific Islands Fisheries Science Center
Data Set
(DS)
| ID: 25310
| Published / External
Created: 2015-06-09
|
Last Modified: 2023-10-17
Project (PRJ) | ID: 12850
ID: 25310
Data Set (DS)
* Discovery• First Pass
» Metadata Rubric
Item Identification
* » Title | 2005-present_Cetacean Biopsy Samples from the Pacific Islands Region |
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Short Name | |
* Status | In Work |
Creation Date | 2015 |
Revision Date | |
• Publication Date | |
* » Abstract |
This catalog cetacean skin and blubber samples collected during both small boat and shipboard surveys. Samples are collected using projectile darts. The catalog also contains the database with Information associated with the sample collection and storage. |
* Purpose |
More than 25 species of cetaceans occur in U.S. Exclusive Economic Zone {EEZ) waters of the Pacific Ocean. Six of these species- humpback whales, sperm whales, blue whales, fin whales, sei whales, and North Pacific right whales, and one Discrete Population Segment- Main Hawaiian Islands insular false killer whales- are listed as endangered under the Endangered Species Act, and their stocks are considered depleted under the Manne Mammal Protection Act. The National Marine Fisheries Service (NMFS) is responsible for studying the populations of whales and dolphins within the U.S. EEZ waters of the Pacific Islands Region (PIR). A variety of information is needed in order to properly manage human effects on these populations and protect them from current or future depletion. This includes details on stock structure, abundance, habitat use, natural and anthropogenic threats as well as estimates of reproduction and mortality rates. Biological sample collection Is an essential tool for determining populations structure and ecology. Skin samples are used to elucidate genetic stock structure. Analysis of skin and blubber for contaminants and stable isotopes provide additional information on stock structure. In addition, stable isotope and fatty acid composition provides information about trophic relationships. |
Notes |
See specific region projects for more information. |
Other Citation Details |
Biopsy samples were collected under NMFS permits 15240 (PIFSC), 14097 (SWFSC), 727-1915 (SIO), and 774-1714 (SWFSC). When possible biopsy samples are cut in half (longitudinally) and one half of each sample are sent to the SWFSC for archive. |
• Supplemental Information | |
DOI (Digital Object Identifier) | |
DOI Registration Authority | |
DOI Issue Date |
Keywords
Theme Keywords
Thesaurus | Keyword |
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None | biopsy |
None | Cetacean Research Program |
None | cetaceans |
None | contaminants |
None | genetics |
None | Pacific Islands Fisheries Science Center |
None | Protected Species Division |
None | skin and blubber |
Temporal Keywords
Thesaurus | Keyword |
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* Spatial Keywords
Thesaurus | Keyword |
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None | American Samoa EEZ |
None | Commonwealth of the Northern Mariana Islands EEZ |
None | Guam EEZ |
None | Main Hawaiian Islands |
None | Mariana Archipelago |
None | Northwestern Hawaiian Islands |
None | Pacific Islands Region |
None | Palmyra EEZ |
None | Papahanaumokuakea Marine Mational Monument |
None | Wake EEZ |
Stratum Keywords
Thesaurus | Keyword |
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Instrument Keywords
Thesaurus | Keyword |
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None | crossbow |
Platform Keywords
Thesaurus | Keyword |
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None | Oscar Elton Sette |
None | small boat |
Physical Location
• » Organization | Pacific Islands Fisheries Science Center |
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• » City | Honolulu |
• » State/Province | HI |
• Country | USA |
• » Location Description |
IRC 1845 Wasp Blvd., Bldg. 176 Honolulu, HI 96818 |
Data Set Information
* Data Set Scope Code | Data Set |
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• Data Set Type | Other |
• Maintenance Frequency | As Needed |
Maintenance Note | |
» Data Presentation Form | digital table and tissue sample |
• Entity Attribute Overview | |
Entity Attribute Detail Citation | |
Entity Attribute Detail URL | |
Distribution Liability | |
Data Set Credit |
Support Roles
* » Support Role | Data Steward |
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* » Date Effective From | 2008-12-01 |
Date Effective To | |
Person | Oleson, Erin M |
Address |
1845 Wasp Blvd. Honolulu, HI 96818 USA |
Email Address | erin.oleson@noaa.gov |
Phone | (808)725-5712 |
Fax | |
Mobile | |
URL | |
Business Hours | 9:00 a.m. - 5:00 p.m. |
Contact Instructions |
contact by email |
* » Support Role | Data Steward |
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* » Date Effective From | 2006-09-01 |
Date Effective To | |
Person | Hill, Marie C |
Address |
1845 Wasp Blvd. Honolulu, HI 96818 USA |
Email Address | marie.hill@noaa.gov |
Phone | (808)725-5710 |
Fax | |
Mobile | |
URL | |
Business Hours | |
Contact Instructions |
contact by email |
* » Support Role | Data Steward |
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* » Date Effective From | 2005-10-01 |
Date Effective To | 2008-06-01 |
Person | Johnston, David W |
Email Address | dave.johnston@noaa.gov |
Phone | |
Fax | |
Mobile | |
URL | |
Business Hours | |
Contact Instructions |
* » Support Role | Distributor |
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* » Date Effective From | 2006 |
Date Effective To | |
Organization | Pacific Islands Fisheries Science Center (PIFSC) |
Address |
1845 Wasp Blvd. Honolulu, HI 96818 USA |
Email Address | pifsc.info@noaa.gov |
Phone | 808-725-5360 |
Fax | |
Mobile | |
URL | https://www.pifsc.noaa.gov |
Business Hours | 8:00 a.m. - 4:30 p.m. |
Contact Instructions |
* » Support Role | Metadata Contact |
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* » Date Effective From | 2006-09-01 |
Date Effective To | |
Person | Hill, Marie C |
Address |
1845 Wasp Blvd. Honolulu, HI 96818 USA |
Email Address | marie.hill@noaa.gov |
Phone | (808)725-5710 |
Fax | |
Mobile | |
URL | |
Business Hours | |
Contact Instructions |
contact by email |
* » Support Role | Point of Contact |
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* » Date Effective From | 2006 |
Date Effective To | |
Person | Hill, Marie C |
Address |
1845 Wasp Blvd. Honolulu, HI 96818 USA |
Email Address | marie.hill@noaa.gov |
Phone | (808)725-5710 |
Fax | |
Mobile | |
URL | |
Business Hours | |
Contact Instructions |
* » Support Role | |
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* » Date Effective From | |
Date Effective To | |
* » Contact | |
* Contact Instructions |
* » Support Role | |
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* » Date Effective From | |
Date Effective To | |
* » Contact | |
* Contact Instructions |
* » Support Role | |
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* » Date Effective From | |
Date Effective To | |
* » Contact | |
* Contact Instructions |
Extents
Currentness Reference | Ground Condition |
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Extent Group 1
Extent Description |
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Extent Group 1 / Geographic Area 1
* » W° Bound | 142 |
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* » E° Bound | -151 |
* » N° Bound | 32 |
* » S° Bound | -18 |
* » Description |
The U.S. EEZs (Exclusive Economic Zones) of the Pacific Islands Region including Hawaii, American Samoa, Palmyra/Kingman, Wake, Guam/Commonwealth of the Northern Mariana Islands. |
Extent Group 1 / Vertical Extent
EPSG Code | |
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Vertical Minimum | |
Vertical Maximum |
Extent Group 1 / Time Frame 1
* » Time Frame Type | Continuing |
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* » Start | 2005 |
End | |
Alternate Start As Of Info | |
Alternate End As Of Info | |
Description |
Spatial Information
Spatial Resolution
Angular Distance | |
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Equivalent Scale Denominator | |
Level of Detail Description |
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Spatial Representation
Grid Representation Used? | |
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Vector Representation Used? | |
Text / Table Representation Used? | |
TIN Representation Used? | |
Stereo Model Representation Used? | |
Video Representation Used? |
Grid Representation
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Vector Representation
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Curve Object Present? | |
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Point Object Present? | |
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Solid Object Present? | |
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Surface Object Present? | |
Surface Object Count |
Reference Systems
Reference System
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Access Information
Data License | |
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Data License URL | |
Data License Statement | |
* » Security Class | Unclassified |
* Security Classification System | |
Security Handling Description | |
• Data Access Policy |
Requestor will be asked to submit a request by email to Erin Oleson (erin.oleson@noaa.gov) or Marie Hill (marie.hill@noaa.gov) |
» Data Access Procedure |
Requestor will be asked to submit a request by email to Erin Oleson (erin.oleson@noaa.gov) or Marie Hill (marie.hill@noaa.gov) |
• » Data Access Constraints |
Requestor will be asked to submit a request by email to Erin Oleson (erin.oleson@noaa.gov) or Marie Hill (marie.hill@noaa.gov) |
• Data Use Constraints |
Requestor will be asked to submit a request by email to Erin Oleson (erin.oleson@noaa.gov) or Marie Hill (marie.hill@noaa.gov). Requests for samples will be considered within the context of other ongoing or proposed projects given limited individual sample volume and overall limited sample size. |
Metadata Access Constraints |
None |
Metadata Use Constraints |
None |
Distribution Information
Start Date | 2005-10 |
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End Date | 2018-02 |
» Download URL | https://oceanwatch.pifsc.noaa.gov/xfer/PIFSC_PIRO_bulk_data_download_InPort_25310.tgz |
Distributor | Pacific Islands Fisheries Science Center (PIFSC) (2006 - Present) |
File Name | PSD_CRP_Biopsy_Samples_2005_to_FEB_2018 |
Description |
A list of the biopsy samples collected during projects conducted by PIFSC or those conducted with PIFSC funding or permit. |
File Date/Time | |
File Type (Deprecated) | SPREADSHEET (MICROSOFT EXCEL) |
Distribution Format | XLS - Microsoft Excel |
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Compression | |
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End Date | |
» Download URL | |
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Description | |
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Description | |
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Application Version | |
Compression | |
Review Status |
Archive Information
Location | |
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File Identifier | |
File Name | |
URL | |
Description | |
DOI | |
Archive Date | |
Archive Update Frequency |
Location | |
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File Identifier | |
File Name | |
URL | |
Description | |
DOI | |
Archive Date | |
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URL | |
Description | |
DOI | |
Archive Date | |
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URLs
URL | |
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URL | |
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URL | |
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Description |
Activity Log
Activity Time | |
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Responsible Party | |
Description |
Activity Time | |
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Description |
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Description |
Issues
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Issue |
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Author | |
Issue |
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Author | |
Issue |
Technical Environment
Description |
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Data Quality
Representativeness | |
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Accuracy | |
Analytical Accuracy | |
Horizontal Positional Accuracy | |
Vertical Positional Accuracy | |
Quantitation Limits | |
Bias | |
Comparability | |
Completeness Measure | |
Precision | |
Analytical Precision | |
Field Precision | |
Sensitivity | |
Detection Limit | |
Completeness Report |
All samples collected are reported within the table |
Conceptual Consistency | |
» Quality Control Procedures Employed |
Biopsy sampling data collected prior to 2011 were collected on paper forms and then data on the biopsy samples collected were transcribed into the biopsy spreadsheet within the Cetacean Research Program (CRP) Microsoft Access database. Datasheets were checked in the field after sampling and data were checked after entry into the access database. After 2011 data on biopsy sampling were collected on an ipad using a Filemaker database. Data are checked in the field in the Filemaker database. Data on samples collected are imported into the primary CRP Access database. |
Data Management
» Have Resources for Management of these Data Been Identified? | No |
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» Approximate Percentage of Budget for these Data Devoted to Data Management | Unknown |
» Do these Data Comply with the Data Access Directive? | No |
» Is Access to the Data Limited Based on an Approved Waiver? | No |
» If Distributor (Data Hosting Service) is Needed, Please Indicate | Data hosting services are needed |
» Approximate Delay Between Data Collection and Dissemination | 1 year |
» If Delay is Longer than Latency of Automated Processing, Indicate Under What Authority Data Access is Delayed |
We are given 1 yr. from the date of data collection to the required date of dissemination. |
» Actual or Planned Long-Term Data Archive Location | To Be Determined |
» If To Be Determined, Unable to Archive, or No Archiving Intended, Explain |
The data are currently archived at the Pacific Islands Fisheries Science Center on hard drives. |
» Approximate Delay Between Data Collection and Archiving | 1wk-1mo |
» How Will the Data Be Protected from Accidental or Malicious Modification or Deletion Prior to Receipt by the Archive? |
Multiple copies are made and stored on different hard drives that are in secure locations. |
Lineage
» Lineage Statement |
Samples are collected using a crossbow. Samples are split in half when possible. Half of the sample is stored at PIFSC in a -80degC freezer and half is sent to Southwest Fisheries Science Center for immediate genetic analysis or for archival storage. Data on sample collection are stored within a Microsoft Access database. |
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Sources
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Scale Denominator |
Process Steps
Process Step Number | |
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» Description | |
Process Date/Time | |
Process Contact | |
Phone (Voice) | |
Email Address | |
Source |
Process Step Number | |
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» Description | |
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Process Contact | |
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Source |
Process Step Number | |
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» Description | |
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Process Contact | |
Phone (Voice) | |
Email Address | |
Source |
Acquisition Information
Instruments
Identifier | RX-150 |
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Docucomp UUID | |
Instrument / Gear | Gear |
Instrument Type | Crossbow |
Description |
RX-150 crossbow with projectile darts are used to collect biopsy samples remotely. |
Identifier | |
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Docucomp UUID | |
Instrument / Gear | |
Instrument Type | |
Description |
Identifier | |
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Docucomp UUID | |
Instrument / Gear | |
Instrument Type | |
Description |
Identifier | |
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Docucomp UUID | |
Instrument / Gear | |
Instrument Type | |
Description |
Platforms
Identifier | Charter vessels-small boats | ||
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Docucomp UUID | |||
Description |
various vessels ranging in size (20-40 ft length) chartered for cetacean surveys when a NOAA small boat is not available. |
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Mounted Instruments |
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Identifier | Oscar Elton Sette (SE) | ||
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Docucomp UUID | 7150f90a-b04f-49bc-9b63-b232e6bdba1b | ||
Description |
TThe NOAA Ship Oscar Elton Sette is named for Dr. Oscar Elton Sette. Dr. Sette was a pioneer in the development of fisheries oceanography and according to many fisheries scientists, is the father of modern fisheries oceanography in the U.S. He is recognized both nationally and internationally for many significant contributions to marine fisheries research. Oscar Elton Sette replaces Townsend Cromwell. Oscar Elton Sette supports the scientific missions of NOAA's National Marine Fisheries Service Pacific Islands Science Center in Honolulu, Hawaii. The ship normally operates throughout the central and western Pacific, and conducts fisheries assessment surveys, physical and chemical oceanography, marine mammal projects and coral reef research. It collects fish and crustacean specimens using bottom trawls, longlines, and fish traps. Plankton, fish larvae and eggs are also collected with plankton nets and surface and mid-water larval nets. The ship routinely conducts scuba diving missions for the Honolulu Laboratory. Ample deck space enables Oscar Elton Sette to carry a recompression chamber as an added safety margin for dive-intensive missions in remote regions. The ship is actively involved in NMFS Honolulu Coral Reef Restoration cruises, which concentrate scientific efforts on the removal, classification and density of marine debris and discarded commercial fishing gear from fragile coral reefs. |
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Mounted Instruments |
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Identifier | SE-06 - Steel Toe | ||
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Docucomp UUID | |||
Description |
18' Safeboat used for various surveys off Oahu and sometimes launched off the Oscar Elton Sette |
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FAQs
Date | |
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Answer |
Related Items
Item Type | Relationship Type | Title |
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Catalog Details
Catalog Item ID | 25310 |
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Metadata Record Created By | Marie C Hill |
Metadata Record Created | 2015-06-09 20:33+0000 |
Metadata Record Last Modified By | SysAdmin InPortAdmin |
» Metadata Record Last Modified | 2023-10-17 16:12+0000 |
Metadata Record Published | 2018-08-09 |
Owner Org | PIFSC |
Metadata Publication Status | Published Externally |
Do Not Publish? | N |
Metadata Workflow State | Published / External |
Metadata Last Review Date | 2018-08-09 |
Metadata Review Frequency | 1 Year |
Metadata Next Review Date | 2019-08-09 |
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