AFSC/RACE/SAP/Long: Data from: Effects of Ocean Acidification on Juvenile Red King Crab (Paralithodes camtschaticus) and Tanner Crab (Chionoecetes bairdi) Growth, Condition, Calcification, and Survival
Alaska Fisheries Science Center
Data Set
(DS)
| ID: 26895
| Published / External
Created: 2015-09-04
|
Last Modified: 2023-05-30
Project (PRJ) | ID: 22354
ID: 26895
Data Set (DS)
* Discovery• First Pass
» Metadata Rubric
Item Identification
* » Title | AFSC/RACE/SAP/Long: Data from: Effects of Ocean Acidification on Juvenile Red King Crab (Paralithodes camtschaticus) and Tanner Crab (Chionoecetes bairdi) Growth, Condition, Calcification, and Survival |
---|---|
Short Name | Data from: Effects of Ocean Acidification on Juvenile Red King Crab (Paralithodes camtschaticus) and Tanner Crab (Chionoecetes bairdi) |
* Status | Completed |
Creation Date | |
Revision Date | |
• Publication Date | 2015 |
* » Abstract |
This data set is the results of a laboratory experiment. Juvenile red king crab and Tanner crab were reared in individual containers for nearly 200 days in flowing control (pH 8.0), pH 7.8, and pH 7.5 seawater at ambient temperatures (range 4.4-11.9 C). Survival, growth, and morphology were measured throughout the experiment. At the end of the experiment, calcium concentration was measured in each crab and the dry mass and condition index of each crab were determined. |
* Purpose |
Ocean acidification, a decrease in the pH in marine waters associated with rising atmospheric CO2 levels, is a serious threat to marine ecosystems. The purpose if this data set is to determine the effects of long-term exposure to near-future levels of ocean acidification on the growth, condition, calcification, and survival of juvenile red king crabs, Paralithodes camtschaticus and Tanner crabs, Chionoecetes bairdi. |
Notes |
Loaded by FGDC Metadata Uploader, batch 7453, 10-28-2015 11:31 The following FGDC sections are not currently supported in InPort, but were preserved and will be included in the FGDC export: - Taxonomy (FGDC:taxonomy) |
Other Citation Details | |
• Supplemental Information | |
DOI (Digital Object Identifier) | |
DOI Registration Authority | |
DOI Issue Date |
Keywords
Theme Keywords
Thesaurus | Keyword |
---|---|
ISO 19115 Topic Category | oceans |
None | growth |
None | juvenile |
None | mortality |
None | ocean acidification |
None | survival |
Temporal Keywords
Thesaurus | Keyword |
---|---|
* Spatial Keywords
Thesaurus | Keyword |
---|---|
None | Alaska |
None | Bristol Bay |
Stratum Keywords
Thesaurus | Keyword |
---|---|
Instrument Keywords
Thesaurus | Keyword |
---|---|
Platform Keywords
Thesaurus | Keyword |
---|---|
Physical Location
• » Organization | Alaska Fisheries Science Center |
---|---|
• » City | Seattle |
• » State/Province | WA |
• Country | USA |
• » Location Description |
Data Set Information
* Data Set Scope Code | Data Set |
---|---|
• Data Set Type | |
• Maintenance Frequency | None Planned |
Maintenance Note | |
» Data Presentation Form | Table (digital) |
• Entity Attribute Overview | |
Entity Attribute Detail Citation | |
Entity Attribute Detail URL | |
Distribution Liability |
The user is responsible for the results of any application of this data for other than its intended purpose. NOAA denies liability if the data are misused. |
Data Set Credit | We thank Mark Blakeslee for help designing the acidification system, and staff of the Kodiak Laboratory wet lab for help in the laboratory. Funding for this project was provided by the NOAA Ocean Acidfication Program. |
Support Roles
* » Support Role | Data Steward |
---|---|
* » Date Effective From | 2015 |
Date Effective To | |
Person | Long, Chris |
Email Address | chris.long@noaa.gov |
Phone | |
Fax | |
Mobile | |
URL | |
Business Hours | |
Contact Instructions |
|
* » Support Role | Distributor |
---|---|
* » Date Effective From | 2015-10-28 |
Date Effective To | |
Person | Long, Chris |
Email Address | chris.long@noaa.gov |
Phone | |
Fax | |
Mobile | |
URL | |
Business Hours | |
Contact Instructions |
|
* » Support Role | Metadata Contact |
---|---|
* » Date Effective From | 2015-10-28 |
Date Effective To | |
Person | MC, Metadata Coordinators |
Email Address | AFSC.metadata@noaa.gov |
Phone | |
Fax | |
Mobile | |
URL | |
Business Hours | |
Contact Instructions |
* » Support Role | Originator |
---|---|
* » Date Effective From | 2015-10-28 |
Date Effective To | |
Person | Foy, Robert |
Email Address | robert.foy@noaa.gov |
Phone | |
Fax | |
Mobile | |
URL | |
Business Hours | |
Contact Instructions |
* » Support Role | Originator |
---|---|
* » Date Effective From | 2015-10-28 |
Date Effective To | |
Person | Swiney, Katherine |
Email Address | katherine.swiney@noaa.gov |
Phone | |
Fax | |
Mobile | |
URL | |
Business Hours | |
Contact Instructions |
* » Support Role | Point of Contact |
---|---|
* » Date Effective From | 2015-10-28 |
Date Effective To | |
Person | Long, Chris |
Email Address | chris.long@noaa.gov |
Phone | |
Fax | |
Mobile | |
URL | |
Business Hours | |
Contact Instructions |
* » Support Role | |
---|---|
* » Date Effective From | |
Date Effective To | |
* » Contact | |
* Contact Instructions |
* » Support Role | |
---|---|
* » Date Effective From | |
Date Effective To | |
* » Contact | |
* Contact Instructions |
* » Support Role | |
---|---|
* » Date Effective From | |
Date Effective To | |
* » Contact | |
* Contact Instructions |
Extents
Currentness Reference | Ground Condition |
---|
Extent Group 1
Extent Description |
---|
Extent Group 1 / Geographic Area 1
* » W° Bound | -152.395268 |
---|---|
* » E° Bound | -152.395268 |
* » N° Bound | 57.782403 |
* » S° Bound | 57.782403 |
* » Description |
Kodiak Fisheries Research Center |
Extent Group 1 / Vertical Extent
EPSG Code | |
---|---|
Vertical Minimum | |
Vertical Maximum |
Extent Group 1 / Time Frame 1
* » Time Frame Type | Range |
---|---|
* » Start | 2010-06 |
End | 2010-12 |
Alternate Start As Of Info | |
Alternate End As Of Info | |
Description |
Spatial Information
Spatial Resolution
Angular Distance | |
---|---|
Angular Distance Units | |
Horizontal Distance | |
Horizontal Distance Units | |
Vertical Distance | |
Vertical Distance Units | |
Equivalent Scale Denominator | |
Level of Detail Description |
|
Spatial Representation
Grid Representation Used? | |
---|---|
Vector Representation Used? | |
Text / Table Representation Used? | |
TIN Representation Used? | |
Stereo Model Representation Used? | |
Video Representation Used? |
Grid Representation
Dimension Count | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Cell Geometry | |||||||||||||
Transformation Parameter Available? | |||||||||||||
Axis Dimension |
|||||||||||||
|
|||||||||||||
Axis Dimension |
|||||||||||||
|
Vector Representation
Topology Level | |
---|---|
Complex Object Present? | |
Complex Object Count | |
Composite Object Present? | |
Composite Object Count | |
Curve Object Present? | |
Curve Object Count | |
Point Object Present? | |
Point Object Count | |
Solid Object Present? | |
Solid Object Count | |
Surface Object Present? | |
Surface Object Count |
Reference Systems
Reference System
EPSG Code | |||||||||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Horizontal Resolution |
|||||||||||||||||||||||||||||
|
|||||||||||||||||||||||||||||
Vertical Resolution |
|||||||||||||||||||||||||||||
|
Access Information
Data License | |
---|---|
Data License URL | |
Data License Statement | |
* » Security Class | Unclassified |
* Security Classification System | |
Security Handling Description | |
• Data Access Policy | |
» Data Access Procedure |
unknown |
• » Data Access Constraints |
There are no legal restrictions on access to the data. They reside in public domain and can be freely distributed. |
• Data Use Constraints |
User must read and fully comprehend the metadata prior to use. Applications or inferences derived from the data should be carefully considered for accuracy. In any publications and/or other representations of these data this this metadata should be cited as well as the paper describing the results: Long, W. C., Swiney, K. M., Harris, C., Page, H. N., and Foy, R. J. 2013. Effects of ocean acidification on juvenile red king crab (Paralithodes camtschaticus) and Tanner crab (Chionoecetes bairdi) growth, condition, calcification, and survival. PLoS ONE, 8: e60959. DOI:10.1371/journal.pone.0060959 |
Metadata Access Constraints | |
Metadata Use Constraints |
Distribution Information
Start Date | |
---|---|
» Download URL | https://console.cloud.google.com/storage/browser/nmfs_odp_afsc/RACE/SAP/Long%3B%20Data%20from%3B%20Effects%20of%20Ocean%20Acidification%20on%20Juvenile%20Red%20King%20Crab%20%28Paralithodes%20camtschaticus%29%20and%20Tanner%20Crab%20%28Chionoecetes%20bairdi%29%20Growth,%20Condition,%20Calcification,%20and%20Survival |
Distributor | |
File Name | |
Description |
Note: Dataset migrated by Dan Woodrich (AFSC data management coordinator) on 12/16/2021. Contact: Daniel.woodrich@noaa.gov |
File Date/Time | |
File Type (Deprecated) | |
Distribution Format | |
File Size | |
Application Version | |
Compression | |
Review Status |
Start Date | |
---|---|
End Date | |
» Download URL | |
Distributor | |
File Name | |
Description | |
File Date/Time | |
File Type | |
FGDC Content Type | |
File Size | |
Application Version | |
Compression | |
Review Status |
Start Date | |
---|---|
End Date | |
» Download URL | |
Distributor | |
File Name | |
Description | |
File Date/Time | |
File Type | |
FGDC Content Type | |
File Size | |
Application Version | |
Compression | |
Review Status |
Start Date | |
---|---|
End Date | |
» Download URL | |
Distributor | |
File Name | |
Description | |
File Date/Time | |
File Type | |
FGDC Content Type | |
File Size | |
Application Version | |
Compression | |
Review Status |
Archive Information
Location | |
---|---|
File Identifier | |
File Name | |
URL | |
Description | |
DOI | |
Archive Date | |
Archive Update Frequency |
Location | |
---|---|
File Identifier | |
File Name | |
URL | |
Description | |
DOI | |
Archive Date | |
Archive Update Frequency |
Location | |
---|---|
File Identifier | |
File Name | |
URL | |
Description | |
DOI | |
Archive Date | |
Archive Update Frequency |
URLs
URL | http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0060959 |
---|---|
Name | |
URL Type | Online Resource |
File Resource Format | web page |
Description |
journal article |
URL | |
---|---|
Name | |
URL Type | |
File Resource Format | |
Description |
URL | |
---|---|
Name | |
URL Type | |
File Resource Format | |
Description |
URL | |
---|---|
Name | |
URL Type | |
File Resource Format | |
Description |
Activity Log
Activity Time | |
---|---|
Activity Type | |
Responsible Party | |
Description |
Activity Time | |
---|---|
Activity Type | |
Responsible Party | |
Description |
Activity Time | |
---|---|
Activity Type | |
Responsible Party | |
Description |
Issues
Issue Date | |
---|---|
Author | |
Issue |
Issue Date | |
---|---|
Author | |
Issue |
Issue Date | |
---|---|
Author | |
Issue |
Technical Environment
Description |
Access |
---|
Data Quality
Representativeness | |
---|---|
Accuracy |
All data was checked for accuracy, examined for outliers, and data outside of the range. |
Analytical Accuracy | |
Horizontal Positional Accuracy | |
Vertical Positional Accuracy | |
Quantitation Limits | |
Bias | |
Comparability | |
Completeness Measure | |
Precision | |
Analytical Precision | |
Field Precision | |
Sensitivity | |
Detection Limit | |
Completeness Report |
The data is complete, no omissions were made. |
Conceptual Consistency |
Not applicable. |
» Quality Control Procedures Employed |
All data was checked for accuracy, examined for outliers, and data outside of the range. |
Data Management
» Have Resources for Management of these Data Been Identified? | No |
---|---|
» Approximate Percentage of Budget for these Data Devoted to Data Management | Unknown |
» Do these Data Comply with the Data Access Directive? | No |
» Is Access to the Data Limited Based on an Approved Waiver? | No |
» If Distributor (Data Hosting Service) is Needed, Please Indicate | yes |
» Approximate Delay Between Data Collection and Dissemination | unknown |
» If Delay is Longer than Latency of Automated Processing, Indicate Under What Authority Data Access is Delayed |
No delay |
» Actual or Planned Long-Term Data Archive Location | NCEI-MD |
» Approximate Delay Between Data Collection and Archiving | Unknown |
» How Will the Data Be Protected from Accidental or Malicious Modification or Deletion Prior to Receipt by the Archive? |
IT Security and Contingency Plan for the system establishes procedures and applies to the functions, operations, and resources necessary to recover and restore data as hosted in the Western Regional Support Center in Seattle, Washington, following a disruption. |
Lineage
» Lineage Statement |
---|
Sources
Citation Title | |
---|---|
Contact Role Type | |
Contact Type | |
Contact Name | |
Publish Date | |
Extent Type | |
Extent Start Date/Time | |
Extent End Date/Time | |
Citation URL | |
Citation URL Name | |
Citation URL Description | |
Scale Denominator |
Citation Title | |
---|---|
Contact Role Type | |
Contact Type | |
Contact Name | |
Publish Date | |
Extent Type | |
Extent Start Date/Time | |
Extent End Date/Time | |
Citation URL | |
Citation URL Name | |
Citation URL Description | |
Scale Denominator |
Citation Title | |
---|---|
Contact Role Type | |
Contact Type | |
Contact Name | |
Publish Date | |
Extent Type | |
Extent Start Date/Time | |
Extent End Date/Time | |
Citation URL | |
Citation URL Name | |
Citation URL Description | |
Scale Denominator |
Process Steps
Process Step Number | 1 |
---|---|
» Description |
For this experiment, we used filtered seawater pumped into the laboratory from Trident Basin (Kodiak, AK). The experimental setup used flow-through water at ambient temperature and salinity. As we did not control temperature, the conditions the crabs were exposed to mimicked the natural fluctuations to which crabs would naturally be exposed. We used seawater acidified with CO2 to pHs based on projected future levels of atmospheric CO2 and the predicted change in seawater pH associated with it: 1) ambient pH (about 8.0), 2) 7.8 pH c. 2100, and 3) 7.5 pH c. 2200. To obtain the desired treatment levels CO2 was bubbled in ambient local seawater to a pH of 5.5. This water was mixed with seawater to the treatment pHs using a peristaltic pump whose speed was controlled by a pH probe in a head tank similar. Water from the head tank was supplied to the experimental containers. When the measured pH in the experimental containers deviated from the nominal pH levels by more than 0.02 units the settings on the pH probe were adjusted accordingly. |
Process Date/Time | |
Process Contact | |
Phone (Voice) | |
Email Address | |
Source |
Process Step Number | 2 |
---|---|
» Description |
Red king crabs were supplied by the Alutiiq Pride Shellfish Hatchery. Ovigerous red king crabs were captured in Bristol Bay, Alaska, in commercial pots during the winter of 2009. Larvae were reared to the first crab stage before being transported to the Kodiak lab in insulated shipping containers. Juvenile Tanner crabs were caught in a modified benthic sled with a 1 m mouth opening in local Kodiak waters. Throughout the experiment, the crabs were fed to excess on a gel diet of “Gelly Belly ” (Florida Aqua Farms, Inc., Dade City, Florida, USA) with Cyclop-eeze powder and pollock bone powder (United States Department of Agriculture, Agricultural Research Service, Kodiak, Alaska, USA). Crabs were fed three times a week and old food was removed just prior to feeding. The experiment was performed in three tanks (120 (L) x 60 (W) x 60 (H) cm), each of which was randomly assigned a treatment. Ninety crabs per species were randomly assigned to each of three treatments (30 crabs per species per treatment). Each crab was placed in an individual holding cell made of a piece of PVC pipe (diameter 5.1 cm) with mesh glued on the bottom. Flow-through water from the head tanks was provided to each cell. The Tanner crab experiment was started on June 4, 2010, and the red king crab experiment on June 10, 2010. Daily, five randomly selected cells per treatment were monitored for pH and temperature. pH was measured using a Ross Combination glass bulb pH electrode (Thermo Electron Corporation, Beverly, MA) calibrated with Tris buffer on the pHF scale. Weekly water samples were taken from the head tanks, poisoned with mercuric chloride, and sent to an analytical laboratory for salinity, dissolved inorganic carbon (DIC), and alkalinity analysis. DIC was determined using a CM5014 Coulometer with a CM5130 Acidification Module (UIC Inc., Joliet, IL) using Certified Reference Material from the Dickson Laboratory (Scripps Institute, San Diego, CA). Alkalinity was measured via open cell titration. Crabs were checked daily for molting or death. Dead crabs and exuvia were removed from the tanks for morphometric analysis. The carapace from each exuvia and dead crab was carefully removed and photographed under a stereomicroscope. Partway through the experiment, we noted that it had become difficult to remove the carapace off dead crabs, particularly in the low pH treatments, so we started photographing dead crabs before attempting to remove the carapace. If successful, we photographed the carapace as well and used that for image analysis; otherwise, we used the image of the dead crab. Image analysis was performed using Image-Pro Plus v. 6.00.260 imaging software (Media Cybernetics, Inc., Bethesda, Maryland, USA) calibrated with a micrometer. On red king crab we measured carapace width, carapace length, rostrum base width, orbital spine width, and the first spine length. On Tanner crab, we measured carapace width CW), carapace length (CL), carapace length to the rostrum, carapace length to the eye orbit, rostrum base width, rostrum length, orbital spine width, and orbital spine length. The wet mass of each crab, after it was carefully blotted dry, was measured at the beginning of the experiment and 7 days after each molt. The experiments were ended on December 20, 2010, when temperatures had dropped low enough that the crabs were no longer molting frequently. At the end of the experiment, all crabs were sacrificed by freezing. The crabs were imaged for morphometric analysis as above. Each crab was dried to a constant mass at 60 C to obtain the dry mass. Calcium, magnesium, potassium, and sodium content in each crab was determined at an analytical laboratory using a Dionex Ion Chromatography system. The conditions of the crab at the end of the experiment were calculated as the condition index (also known as the body mass index) defined as the dry mass in grams divided by the CL^3 (red king crab) or CW^3 (Tanner crab) in millimeters. |
Process Date/Time | |
Process Contact | |
Phone (Voice) | |
Email Address | |
Source |
Process Step Number | |
---|---|
» Description | |
Process Date/Time | |
Process Contact | |
Phone (Voice) | |
Email Address | |
Source |
Process Step Number | |
---|---|
» Description | |
Process Date/Time | |
Process Contact | |
Phone (Voice) | |
Email Address | |
Source |
Process Step Number | |
---|---|
» Description | |
Process Date/Time | |
Process Contact | |
Phone (Voice) | |
Email Address | |
Source |
Acquisition Information
Instruments
Instrument Unavailable Reason |
---|
Identifier | |
---|---|
Docucomp UUID | |
Instrument / Gear | |
Instrument Type | |
Description |
Identifier | |
---|---|
Docucomp UUID | |
Instrument / Gear | |
Instrument Type | |
Description |
Identifier | |
---|---|
Docucomp UUID | |
Instrument / Gear | |
Instrument Type | |
Description |
Platforms
Platform Unavailable Reason |
---|
Identifier | |||||||
---|---|---|---|---|---|---|---|
Docucomp UUID | |||||||
Description | |||||||
Mounted Instruments |
|||||||
|
Identifier | |||||||
---|---|---|---|---|---|---|---|
Docucomp UUID | |||||||
Description | |||||||
Mounted Instruments |
|||||||
|
Identifier | |||||||
---|---|---|---|---|---|---|---|
Docucomp UUID | |||||||
Description | |||||||
Mounted Instruments |
|||||||
|
FAQs
Date | |
---|---|
Author | |
Question | |
Answer |
Child Items
Rubric scores updated every 15m
Score | Type | Title |
---|---|---|
Entity (ENT) | Carapace measurements | |
Entity (ENT) | Masses | |
Entity (ENT) | Metals and dry mass | |
Entity (ENT) | Molting dates | |
Entity (ENT) | Time to death | |
Entity (ENT) | Water chemistry | |
Entity (ENT) | pH and temp | |
Related Items
Item Type | Relationship Type | Title |
---|---|---|
Catalog Details
Catalog Item ID | 26895 |
---|---|
Metadata Record Created By | Nancy Roberson |
Metadata Record Created | 2015-09-04 10:33+0000 |
Metadata Record Last Modified By | SysAdmin InPortAdmin |
» Metadata Record Last Modified | 2023-05-30 18:09+0000 |
Metadata Record Published | 2016-05-16 |
Owner Org | AFSC |
Metadata Publication Status | Published Externally |
Do Not Publish? | N |
Metadata Workflow State | Published / External |
Metadata Last Review Date | 2016-05-16 |
Metadata Review Frequency | 1 Year |
Metadata Next Review Date | 2017-05-16 |
Tags |
---|