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                 source="https://www.fisheries.noaa.gov">
   <item-identification>
      <catalog-item-id>30888</catalog-item-id>
      <title>SDMG - Sablefish Muscle Physiology</title>
      <catalog-item-type>Data Set</catalog-item-type>
      <metadata-workflow-state ccs-id="9">Published / External</metadata-workflow-state>
      <parent-catalog-item-id>30657</parent-catalog-item-id>
      <parent-title>EFS (Environmental and Fisheries Sciences) Division</parent-title>
      <parent-catalog-item-type>Project</parent-catalog-item-type>
      <status>Completed</status>
      <publication-date>2019-05-31</publication-date>
      <abstract>Meat producing animals in agriculture are the result of ongoing genetic selection for desirable characteristics related to growth rates, feed efficiencies, product yield, and quality. Skeletal muscle is the valuable end product and is a major contributor to an animal’s mass, energy metabolism, and overall health. Considering aquaculture is relatively new to the agriculture sector, our knowledge of growth processes in other meat producing species will serve as a platform for advancing our understanding of finfish muscle growth physiology.

Patterns of fish muscle growth originate at the cellular level and are influenced by genetic and environmental factors. Variation in muscle growth exists between fish species, as well as between individual fish of the same species. Cellular growth mechanisms in muscle are significantly influenced by factors like developmental stage, exercise, nutrition, temperature, light duration, and salinity. Understanding how these factors interact with genetic determinants to modify muscle growth patterns in fish will be important to optimizing muscle growth and sustainable practices in aquaculture.

We will evaluate expression levels of genes known to control muscle growth in vertebrates. Our goal is to identify a physiological marker of enhanced growth in sablefish that can be applied to broodstock selection strategies and future nutrition and rearing condition experiments. Sablefish is a model marine coldwater species from the north Pacific Ocean with commercial aquaculture potential. The immediate application of a growth marker would contribute to achieving faster growing sablefish strains for more efficient aquaculture production.
Sablefish Dimorphic Muscle Growth.</abstract>
      <supplemental-information>Subject to Public Access to Research Results (PARR): Yes</supplemental-information>
   </item-identification>
   <keywords>
      <keyword controlled="No">
         <keyword-type>Theme</keyword-type>
         <keyword>physiological parameters</keyword>
      </keyword>
      <keyword controlled="No">
         <keyword-type>Theme</keyword-type>
         <keyword>sablefish</keyword>
      </keyword>
      <keyword controlled="No">
         <keyword-type>Instrument</keyword-type>
         <keyword>Unknown Instrument</keyword>
      </keyword>
   </keywords>
   <physical-location>
      <organization>Northwest Fisheries Science Center</organization>
      <city>Seattle</city>
      <state-province>WA</state-province>
      <country>USA</country>
   </physical-location>
   <data-set-information>
      <data-set-scope-code>Data Set</data-set-scope-code>
      <data-set-type>Spreadsheet</data-set-type>
      <data-presentation-form>Table (digital)</data-presentation-form>
      <instrument>Unknown Instrument</instrument>
      <platform>Platform Not Applicable</platform>
      <physical-collection-fishing-gear>Not Applicable</physical-collection-fishing-gear>
   </data-set-information>
   <entity-attribute-information partial-listing="No" total-count="1">
      <entity>
         <item-identification>
            <catalog-item-id>56804</catalog-item-id>
            <title>Sablefish dimorphic muscle growth (SDMG) fish data</title>
            <short-name>Sablefish dimorphic muscle growth (SDMG) fish data</short-name>
            <metadata-workflow-state ccs-id="9">Published / External</metadata-workflow-state>
            <status>Planned</status>
            <abstract>fish sex, parentage, lengths, weights, and comments.</abstract>
         </item-identification>
         <entity-information>
            <entity-type>Spreadsheet</entity-type>
            <active-version>Yes</active-version>
            <schema>PARR</schema>
            <description>fish sex, parentage, lengths, weights, and comments.</description>
         </entity-information>
         <data-attributes partial-listing="No" total-count="9">
            <data-attribute cc-id="859192">
               <seq-order>1</seq-order>
               <name>sample_date</name>
               <data-storage-type>date</data-storage-type>
               <required>Yes</required>
               <primary-key>No</primary-key>
               <status>Active</status>
               <description>Date sablefish was sacraficed and sampled. Units for values are MM/DD/YYYY.</description>
               <general-data-type>date</general-data-type>
               <units>MM/DD/YYYY</units>
            </data-attribute>
            <data-attribute cc-id="859193">
               <seq-order>2</seq-order>
               <name>time_point</name>
               <data-storage-type>text</data-storage-type>
               <required>Yes</required>
               <primary-key>No</primary-key>
               <status>Active</status>
               <description>Month of sampling in experimental timeline.</description>
               <general-data-type>text</general-data-type>
            </data-attribute>
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               <seq-order>3</seq-order>
               <name>fish_ID</name>
               <data-storage-type>number</data-storage-type>
               <max-length>4</max-length>
               <required>Yes</required>
               <primary-key>No</primary-key>
               <status>Active</status>
               <description>Number assigned to fish in larger sablefish dimorphic growth study.</description>
               <general-data-type>number</general-data-type>
            </data-attribute>
            <data-attribute cc-id="859195">
               <seq-order>4</seq-order>
               <name>sex</name>
               <data-storage-type>text</data-storage-type>
               <required>Yes</required>
               <primary-key>No</primary-key>
               <status>Active</status>
               <description>Sex of fish determined by chromosomal analysis.</description>
               <general-data-type>text</general-data-type>
            </data-attribute>
            <data-attribute cc-id="859196">
               <seq-order>5</seq-order>
               <name>family</name>
               <data-storage-type>number</data-storage-type>
               <max-length>1</max-length>
               <required>Yes</required>
               <primary-key>No</primary-key>
               <status>Active</status>
               <description>Number assigned to family of origin, 1 or 2.</description>
               <general-data-type>number</general-data-type>
            </data-attribute>
            <data-attribute cc-id="859197">
               <seq-order>6</seq-order>
               <name>fork_length</name>
               <data-storage-type>number</data-storage-type>
               <max-length>3</max-length>
               <required>No</required>
               <primary-key>No</primary-key>
               <status>Active</status>
               <description>Fork length of fish. Units for values are cm.</description>
               <general-data-type>number</general-data-type>
               <units>cm</units>
               <allowed-values>0-100</allowed-values>
            </data-attribute>
            <data-attribute cc-id="859198">
               <seq-order>7</seq-order>
               <name>weight</name>
               <data-storage-type>number</data-storage-type>
               <max-length>4</max-length>
               <required>Yes</required>
               <primary-key>No</primary-key>
               <status>Active</status>
               <description>Fish weight. Units for values are g.</description>
               <general-data-type>number</general-data-type>
               <units>g</units>
               <allowed-values>0-5000</allowed-values>
            </data-attribute>
            <data-attribute cc-id="859199">
               <seq-order>8</seq-order>
               <name>CF</name>
               <data-storage-type>number</data-storage-type>
               <max-length>3</max-length>
               <required>Yes</required>
               <primary-key>No</primary-key>
               <status>Active</status>
               <description>Fulton's calculated fish condition factor.</description>
               <general-data-type>number</general-data-type>
               <allowed-values>0-2</allowed-values>
            </data-attribute>
            <data-attribute cc-id="859200">
               <seq-order>9</seq-order>
               <name>comments</name>
               <data-storage-type>text</data-storage-type>
               <max-length>3</max-length>
               <required>No</required>
               <primary-key>No</primary-key>
               <status>Active</status>
               <description>Comments on fish appearance.</description>
               <general-data-type>text</general-data-type>
            </data-attribute>
         </data-attributes>
      </entity>
   </entity-attribute-information>
   <support-roles>
      <support-role cc-id="849801" in-effect="Yes">
         <support-role-type>Data Steward</support-role-type>
         <from-date>2025</from-date>
         <contact-type>Person</contact-type>
         <contact-name>Johnson, Ronald B</contact-name>
         <contact-email>Ronald.B.Johnson@noaa.gov</contact-email>
         <contact-address>2725 Montlake Blvd East</contact-address>
         <contact-address-city>Seattle</contact-address-city>
         <contact-address-state>WA</contact-address-state>
         <contact-address-zip>98112</contact-address-zip>
         <contact-phone-number>206-860-3458</contact-phone-number>
         <contact-fax-number>206-860-3335</contact-fax-number>
      </support-role>
      <support-role cc-id="849802" in-effect="Yes">
         <support-role-type>Distributor</support-role-type>
         <from-date>2015-10-01</from-date>
         <contact-type>Organization</contact-type>
         <contact-name>Northwest Fisheries Science Center</contact-name>
         <contact-noaa-acronym>NWFSC</contact-noaa-acronym>
         <contact-email>nmfs.nwfsc.metadata@noaa.gov</contact-email>
         <contact-ror>https://ror.org/05r7z1k40</contact-ror>
         <contact-address>2725 Montlake Boulevard East</contact-address>
         <contact-address-city>Seattle</contact-address-city>
         <contact-address-state>WA</contact-address-state>
         <contact-address-zip>98112</contact-address-zip>
         <contact-address-country>USA</contact-address-country>
         <contact-phone-number>206-860-3200</contact-phone-number>
         <contact-url>https://www.nwfsc.noaa.gov</contact-url>
         <contact-url-name>NWFSC Home</contact-url-name>
         <contact-url-function>Online Resource</contact-url-function>
      </support-role>
      <support-role cc-id="849800" in-effect="Yes">
         <support-role-type>Metadata Contact</support-role-type>
         <from-date>2015-10-01</from-date>
         <contact-type>Organization</contact-type>
         <contact-name>Northwest Fisheries Science Center</contact-name>
         <contact-noaa-acronym>NWFSC</contact-noaa-acronym>
         <contact-email>nmfs.nwfsc.metadata@noaa.gov</contact-email>
         <contact-ror>https://ror.org/05r7z1k40</contact-ror>
         <contact-address>2725 Montlake Boulevard East</contact-address>
         <contact-address-city>Seattle</contact-address-city>
         <contact-address-state>WA</contact-address-state>
         <contact-address-zip>98112</contact-address-zip>
         <contact-address-country>USA</contact-address-country>
         <contact-phone-number>206-860-3200</contact-phone-number>
         <contact-url>https://www.nwfsc.noaa.gov</contact-url>
         <contact-url-name>NWFSC Home</contact-url-name>
         <contact-url-function>Online Resource</contact-url-function>
      </support-role>
      <support-role cc-id="849804" in-effect="Yes">
         <support-role-type>Originator</support-role-type>
         <from-date>2015-10-01</from-date>
         <contact-type>Person</contact-type>
         <contact-name>Johnson, Ronald B</contact-name>
         <contact-email>Ronald.B.Johnson@noaa.gov</contact-email>
         <contact-address>2725 Montlake Blvd East</contact-address>
         <contact-address-city>Seattle</contact-address-city>
         <contact-address-state>WA</contact-address-state>
         <contact-address-zip>98112</contact-address-zip>
         <contact-phone-number>206-860-3458</contact-phone-number>
         <contact-fax-number>206-860-3335</contact-fax-number>
      </support-role>
      <support-role cc-id="849803" in-effect="Yes">
         <support-role-type>Point of Contact</support-role-type>
         <from-date>2025</from-date>
         <contact-type>Person</contact-type>
         <contact-name>Johnson, Ronald B</contact-name>
         <contact-email>Ronald.B.Johnson@noaa.gov</contact-email>
         <contact-address>2725 Montlake Blvd East</contact-address>
         <contact-address-city>Seattle</contact-address-city>
         <contact-address-state>WA</contact-address-state>
         <contact-address-zip>98112</contact-address-zip>
         <contact-phone-number>206-860-3458</contact-phone-number>
         <contact-fax-number>206-860-3335</contact-fax-number>
      </support-role>
   </support-roles>
   <extents>
      <extent cc-id="849808">
         <geographic-areas>
            <geographic-area cc-id="849810">
               <west-bound>-122.5547</west-bound>
               <east-bound>-122.3062</east-bound>
               <north-bound>47.6449</north-bound>
               <south-bound>47.569</south-bound>
               <description>Montlake</description>
            </geographic-area>
         </geographic-areas>
         <time-frames>
            <time-frame cc-id="849809">
               <time-frame-type>Continuing</time-frame-type>
               <start-date-time>2014-10-01</start-date-time>
            </time-frame>
         </time-frames>
      </extent>
      <extent cc-id="849811">
         <geographic-areas>
            <geographic-area cc-id="849813">
               <west-bound>-122.5547</west-bound>
               <east-bound>-122.3062</east-bound>
               <north-bound>47.6449</north-bound>
               <south-bound>47.569</south-bound>
               <description>Manchester</description>
            </geographic-area>
         </geographic-areas>
         <time-frames>
            <time-frame cc-id="849812">
               <time-frame-type>Continuing</time-frame-type>
               <start-date-time>2014-10-01</start-date-time>
            </time-frame>
         </time-frames>
      </extent>
   </extents>
   <access-information>
      <security-class>Unclassified</security-class>
      <data-access-procedure>At this time, contact the Data Manager for information on obtaining access to this data set. In the near future, the NWFSC will strive to provide all non-sensitive data resources as a web service in order to meet the NOAA Data Access Policy Directive (https://nosc.noaa.gov/EDMC/PD.DA.php).</data-access-procedure>
      <data-access-constraints>NA</data-access-constraints>
   </access-information>
   <distribution-information>
      <distribution cc-id="849806">
         <download-url>https://www.webapps.nwfsc.noaa.gov/apex/parr/sablefish_dimorphic_muscle_growth_sdmg_fish_data/data/page/</download-url>
         <distributor cc-id="849802">
            <from-date>2015-10-01</from-date>
            <contact-type>Organization</contact-type>
            <contact-name>Northwest Fisheries Science Center</contact-name>
            <contact-ror>https://ror.org/05r7z1k40</contact-ror>
         </distributor>
         <file-name>Sablefish dimorphic muscle growth (SDMG) fish data</file-name>
         <description>fish sex, parentage, lengths, weights, and comments.</description>
      </distribution>
      <distribution cc-id="849805">
         <download-url>https://www.webapps.nwfsc.noaa.gov/apex/parrdata/inventory/tables/table/sablefish_dimorphic_muscle_growth_sdmg_fish_data</download-url>
         <distributor cc-id="849802">
            <from-date>2015-10-01</from-date>
            <contact-type>Organization</contact-type>
            <contact-name>Northwest Fisheries Science Center</contact-name>
            <contact-ror>https://ror.org/05r7z1k40</contact-ror>
         </distributor>
         <file-name>Sablefish dimorphic muscle growth (SDMG) fish data</file-name>
         <description>fish sex, parentage, lengths, weights, and comments.</description>
      </distribution>
   </distribution-information>
   <urls>
      <url cc-id="849807">
         <url>https://www.webapps.nwfsc.noaa.gov/apex/parrdata/inventory/datasets/dataset/106873</url>
         <name>SDMG</name>
         <url-type>Online Resource</url-type>
         <file-resource-format>Web site</file-resource-format>
         <description>NWFSC Dataset Information page. Sablefish Dimorphic Muscle Growth</description>
      </url>
   </urls>
   <data-quality>
      <quality-control-procedures>Traceable standards are routinely incorporated into analyses. These data were collected and processed in accordance with established protocols and best practices under the direction of the project’s Principal Investigator. Contact the dataset Data Manager for full QA/QC methodology.</quality-control-procedures>
   </data-quality>
   <data-management>
      <resources-identified>Yes</resources-identified>
      <resources-budget-percentage>10</resources-budget-percentage>
      <data-access-directive-compliant>Yes</data-access-directive-compliant>
      <data-access-directive-waiver>No</data-access-directive-waiver>
      <hosting-service-needed>No</hosting-service-needed>
      <delay-collection-dissemination>0 days</delay-collection-dissemination>
      <delay-collection-dissemination-explanation>No Delay</delay-collection-dissemination-explanation>
      <archive-location>NCEI-MD</archive-location>
      <delay-collection-archive>365</delay-collection-archive>
      <data-protection-plan>The Northwest Fisheries Science Center facilitates backup and recovery of all data and IT components which are managed by IT Operations through the capture of static (point-in-time) backup data to physical media. Once data is captured to physical media (every 1-3 days), a duplicate is made and routinely (weekly) transported to an offsite archive facility where it is maintained throughout the data's applicable life-cycle.</data-protection-plan>
   </data-management>
   <lineage>
      <lineage-statement>Results calculated from instrumental data is MS Excel. These data were collected and processed in accordance with established protocols and best practices under the direction of the project’s Principal Investigator. Contact the dataset Data Manager for full QA/QC methodology.</lineage-statement>
   </lineage>
   <child-items>
      <child-item>
         <catalog-item-id>56804</catalog-item-id>
         <catalog-item-type>Entity</catalog-item-type>
         <title>Sablefish dimorphic muscle growth (SDMG) fish data</title>
      </child-item>
   </child-items>
   <catalog-details>
      <guid>gov.noaa.nmfs.inport:30888</guid>
      <metadata-record-created-by pers-id="4250">Jeffrey Cowen</metadata-record-created-by>
      <metadata-record-created>2016-02-24T10:06:41</metadata-record-created>
      <metadata-record-last-modified-by pers-id="0">SysAdmin InPortAdmin</metadata-record-last-modified-by>
      <metadata-record-last-modified>2026-03-04T19:17:17</metadata-record-last-modified>
      <record-published>2019-06-04</record-published>
      <owner-organization>Northwest Fisheries Science Center</owner-organization>
      <owner-organization-acronym>NWFSC</owner-organization-acronym>
      <owner-organization-address>2725 Montlake Boulevard East</owner-organization-address>
      <owner-organization-address-city>Seattle</owner-organization-address-city>
      <owner-organization-address-state>WA</owner-organization-address-state>
      <owner-organization-address-zip>98112</owner-organization-address-zip>
      <owner-organization-address-country>USA</owner-organization-address-country>
      <owner-organization-phone>206-860-3200</owner-organization-phone>
      <owner-organization-url>https://www.nwfsc.noaa.gov</owner-organization-url>
      <owner-organization-business-hours/>
      <owner-organization-group-id>1001</owner-organization-group-id>
      <publication-status>Public</publication-status>
      <limited-metadata-available>No</limited-metadata-available>
      <is-do-not-publish>No</is-do-not-publish>
      <metadata-last-review-date>2019-06-04</metadata-last-review-date>
      <metadata-review-frequency>1 Year</metadata-review-frequency>
      <metadata-next-review-date>2020-06-04</metadata-next-review-date>
   </catalog-details>
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