National Status and Trends, Benthic Surveillance Project Aryl Hydrocarbon Hydrolase (AHH) Data, 1988-1992, National Centers for Coastal Ocean Science
National Centers for Coastal Ocean Science
Data Set
(DS)
| ID: 39257
| Published / External
Created: 2017-04-05
|
Last Modified: 2023-10-17
Project (PRJ) | ID: 37215
ID: 39257
Data Set (DS)
* Discovery• First Pass
» Metadata Rubric
Item Identification
* » Title | National Status and Trends, Benthic Surveillance Project Aryl Hydrocarbon Hydrolase (AHH) Data, 1988-1992, National Centers for Coastal Ocean Science |
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Short Name | bsahh_h |
* Status | Completed |
Creation Date | |
Revision Date | |
• Publication Date | 1992 |
* » Abstract |
In order to determine the current status of and detect any long-term trends in the environmental quality of U.S. nearshore waters, NOAA initiated the National Status and Trends program in 1984 with its National Benthic Surveillance Project. The primary objective of the Benthic Surveillance Project was to quantify concentrations of a suite of organic and inorganic contaminants in the livers of fish and surficial sediments from selected sites in the coastal and estuarine waters of the United States. In addition, the levels of certain indicators of the biological effects of these contaminants were measured. Incidences of visible lesions, including fin erosion, have been noted and histopathological examinations of various tissues have been carried out. Originally histopathological examinations determined the prevalence of any identifiable disease conditions in samples of liver, kidney, and gill tissue.In addition the Benthic Surveillance Project analyzed fish liver tissue sample for cytochrome P4501A (CYP1A) activities in liver via analysis for aryl hydrocarbon hydrolase (ahh). The induction of hepatic CYP1A activity is one of the earliest physiological changes detected after exposure to chemical contaminants. A number of studies have shown that measurement of these biochemical alterations combined with measurement of the above-mentioned injuries, give a more consistent assessment of contaminant exposure in indigenous fish that do single bioeffects measurements. |
* Purpose |
In response to concerns over environmental quality of the Nation's coastal and estuarine ecosystems, NOAA created the National Status and Trends (NSandT) Program in 1984. From 1984 through 1993, the Benthic Surveillance Project monitored chemical concentrations in the livers (and for metabolites of PAH's in the bile) of bottom-dwelling fish and in sediments at the sites of fish capture. The Benthic Surveillance Project also measured the biological effects of contaminant exposure, primarily as prevalence's of toxicopathic liver diseases. |
Notes |
981 |
Other Citation Details | |
• Supplemental Information | |
DOI (Digital Object Identifier) | |
DOI Registration Authority | |
DOI Issue Date |
Keywords
Theme Keywords
Thesaurus | Keyword |
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ISO 19115 Topic Category | environment |
None | ahh |
None | aryl hydrocarbon hydrolase |
None | chemical |
None | coastal monitoring |
None | contaminant |
None | fish liver |
None | NCCOS Research Data Type > Field Observation |
None | NCCOS Research Priority > Long-term Monitoring |
None | NCCOS Research Priority > Stressors, Impacts, Mitigation, and Restoration (SIMR) |
None | NCCOS Research Topic > Bioeffects/Toxicity |
None | NCCOS Research Topic > Chemical Contaminants |
None | NCCOS Research Topic > Monitoring |
None | NSandT |
None | oceans |
None | pollutant |
Temporal Keywords
Thesaurus | Keyword |
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* Spatial Keywords
Thesaurus | Keyword |
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None | Apalachicola Bay, St. George Island |
None | Arroyo Colorado, Arroyo City |
None | Baltimore Harbor, Brewerton Channel |
None | Barataria Bay, Barataria Pass |
None | Biscayne Bay, North Bay |
None | Bodega Bay, North |
None | Boston Harbor, Deer Island |
None | Boston Harbor, Hull Bay |
None | Boston Harbor, Mystic River |
None | Boston Harbor, Quincy Bay |
None | Buzzards Bay, West Island |
None | Calcasieu River, Prien Lake |
None | Calcasieu River, West Cove |
None | Cape Elizabeth, Richmond Island |
None | Cape Fear River, Horseshoe Shaol |
None | Charleston Harbor, South Channel |
None | Charlotte Harbor, Cape Haze |
None | Chesapeake Bay, Chester River |
None | Chesapeake Bay, James River |
None | Chesapeake Bay, Patuxent River |
None | Choctawhatchee Bay, Choctawhatchee Bay |
None | Columbia River, Desdemona Sands |
None | Coos Bay, North Bend |
None | Dana Point Harbor, Outside |
None | Dana Point, Inside Harbor |
None | Delaware Bay, Cherry Island Range |
None | Galveston Bay, Cedar Bayou |
None | Galveston Bay, Eagle Point |
None | Galveston Bay, East Bay |
None | Galveston Bay, Goat Islands |
None | Galveston Bay, Greens Bayou |
None | Galveston Bay, Morgans Point |
None | Great Bay, Intracoastal Waterway |
None | Hudson River, Englewood Cliffs |
None | Johns Bay, Pemaquid Neck |
None | Lake Pontchartrain, North Shore |
None | Lake Pontchartrain, South Shore |
None | Lavaca Bay, Point Comfort |
None | Long Island Sound, Lloyd Point |
None | Long Island Sound, Rocky Point |
None | Lower Laguna Madre, Laguna Heights |
None | Lower Laguna Madre, Long Island |
None | Lutak Inlet, Chilkoot River Mouth |
None | Massachusetts Bay, Plymouth Entrance |
None | Mission Bay, Outside |
None | Mississippi River Delta, Head of Passes |
None | Mississippi River Delta, Southeast Pass |
None | Mobile Bay, North Point |
None | Monterey Bay, Indian Head Beach |
None | Narragansett Bay, Prudence Island |
None | NCCOS Research Location > Geographic Area > Coastal Ocean |
None | NCCOS Research Location > Region > Alaska |
None | NCCOS Research Location > Region > East Coast |
None | NCCOS Research Location > Region > Gulf of Mexico |
None | NCCOS Research Location > Region > West Coast |
None | NCCOS Research Location > U.S. States and Territories > Alabama |
None | NCCOS Research Location > U.S. States and Territories > Alaska |
None | NCCOS Research Location > U.S. States and Territories > California |
None | NCCOS Research Location > U.S. States and Territories > Connecticut |
None | NCCOS Research Location > U.S. States and Territories > Delaware |
None | NCCOS Research Location > U.S. States and Territories > Florida |
None | NCCOS Research Location > U.S. States and Territories > Georgia |
None | NCCOS Research Location > U.S. States and Territories > Louisiana |
None | NCCOS Research Location > U.S. States and Territories > Maine |
None | NCCOS Research Location > U.S. States and Territories > Maryland |
None | NCCOS Research Location > U.S. States and Territories > Massachusetts |
None | NCCOS Research Location > U.S. States and Territories > Mississippi |
None | NCCOS Research Location > U.S. States and Territories > New Jersey |
None | NCCOS Research Location > U.S. States and Territories > New York |
None | NCCOS Research Location > U.S. States and Territories > North Carolina |
None | NCCOS Research Location > U.S. States and Territories > Oregon |
None | NCCOS Research Location > U.S. States and Territories > Rhode Island |
None | NCCOS Research Location > U.S. States and Territories > South Carolina |
None | NCCOS Research Location > U.S. States and Territories > Texas |
None | NCCOS Research Location > U.S. States and Territories > Virginia |
None | NCCOS Research Location > U.S. States and Territories > Washington |
None | New Bedford Harbor, Clarks Point |
None | Niantic Bay, Black Point |
None | Oceanside Harbor, Outside |
None | Pamlico Sound, Jones Bay |
None | Pascagoula River, Escatawpa River |
None | Pascagoula River, Pascagoula River |
None | Penobscot Bay, Colt Head Island |
None | Pensacola Bay, Pensacola Bay |
None | Prince William Sound, Port Valdez |
None | Puget Sound, Commencement Bay |
None | Puget Sound, Elliott Bay |
None | Puget Sound, Nisqually Reach |
None | Raritan Bay, East Reach |
None | Raritan Bay, Gravesend Bay |
None | Raritan Bay, Upper Bay |
None | Raritan Bay, West Reach |
None | Salem Harbor, Folger Point |
None | San Antonio Bay, Mosquito Point |
None | San Diego Bay, Harbor Island |
None | San Diego Bay, National City |
None | San Diego Bay, North |
None | San Diego Bay, Outside |
None | San Diego Bay, Shelter Island |
None | San Diego Bay, Twenty Eighth Street |
None | San Francisco Bay, Castro Creek |
None | San Francisco Bay, Hunters Point |
None | San Francisco Bay, Oakland Estuary |
None | San Francisco Bay, Redwood City |
None | San Francisco Bay, San Pablo Bay |
None | San Francisco Bay, Southampton Shoal |
None | San Luis Obispo Bay, San Luis Obispo Bay |
None | San Pedro Bay, Cerritos Channel |
None | San Pedro Bay, Long Beach |
None | San Pedro Bay, Mid Harbor |
None | San Pedro Bay, Outer Harbor |
None | San Pedro Bay, Seal Beach |
None | Santa Monica Bay, North |
None | Santa Monica Bay, South |
None | Santa Monica Bay, Southeast |
None | Santa Monica Bay, West |
None | Sapelo Sound, Dog Hammock |
None | Savannah River, Elba Island |
None | Skagway, Skagway River |
None | St. Andrews Bay, Military Point |
None | St. Johns River, Arlington Channel |
None | St. Lucie River, Stuart |
None | Tampa Bay, Northern Tampa Bay |
None | U.S. Exclusive Economic Zone |
Stratum Keywords
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Instrument Keywords
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Platform Keywords
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Physical Location
• » Organization | National Centers for Coastal Ocean Science |
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• » City | Silver Spring |
• » State/Province | MD |
• Country | |
• » Location Description |
Data Set Information
* Data Set Scope Code | Data Set |
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• Data Set Type | |
• Maintenance Frequency | None Planned |
Maintenance Note | |
» Data Presentation Form | Table (digital) |
• Entity Attribute Overview | |
Entity Attribute Detail Citation | |
Entity Attribute Detail URL | |
Distribution Liability |
None |
Data Set Credit |
Support Roles
* » Support Role | Data Steward |
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* » Date Effective From | 1992 |
Date Effective To | |
Position | NCCOS Scientific Data Coordinator |
Email Address | NCCOS.data@noaa.gov |
Phone | |
Fax | |
Mobile | |
URL | |
Business Hours | |
Contact Instructions |
* » Support Role | Distributor |
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* » Date Effective From | 1992 |
Date Effective To | |
Position | NCCOS Scientific Data Coordinator |
Email Address | NCCOS.data@noaa.gov |
Phone | |
Fax | |
Mobile | |
URL | |
Business Hours | |
Contact Instructions |
* » Support Role | Metadata Contact |
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* » Date Effective From | 1992 |
Date Effective To | |
Position | NCCOS Scientific Data Coordinator |
Email Address | NCCOS.data@noaa.gov |
Phone | |
Fax | |
Mobile | |
URL | |
Business Hours | |
Contact Instructions |
* » Support Role | Point of Contact |
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* » Date Effective From | 1992 |
Date Effective To | |
Position | NCCOS Scientific Data Coordinator |
Email Address | NCCOS.data@noaa.gov |
Phone | |
Fax | |
Mobile | |
URL | |
Business Hours | |
Contact Instructions |
* » Support Role | Principal Investigator |
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* » Date Effective From | 1992 |
Date Effective To | |
Person | Piniak, Greg |
Email Address | greg.piniak@noaa.gov |
Phone | |
Fax | |
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URL | |
Business Hours | |
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* » Support Role | |
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* » Date Effective From | |
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* » Contact | |
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* Contact Instructions |
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* » Date Effective From | |
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* Contact Instructions |
Extents
Currentness Reference | Publication Date |
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Extent Group 1
Extent Description |
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Extent Group 1 / Geographic Area 1
* » W° Bound | -166.5 |
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* » E° Bound | -67.333 |
* » N° Bound | 70.5 |
* » S° Bound | 25.615 |
* » Description |
Extent Group 1 / Vertical Extent
EPSG Code | |
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Vertical Minimum | |
Vertical Maximum |
Extent Group 1 / Time Frame 1
* » Time Frame Type | Range |
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* » Start | 1988 |
End | 1992 |
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Alternate End As Of Info | |
Description |
Spatial Information
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Grid Representation Used? | |
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Vector Representation Used? | Yes |
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Access Information
Data License | |
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Data License URL | |
Data License Statement | |
* » Security Class | Unclassified |
* Security Classification System | |
Security Handling Description | |
• Data Access Policy | |
» Data Access Procedure | |
• » Data Access Constraints |
None |
• Data Use Constraints |
NOAA requests that all individuals who download NSandT data acknowledge the source of these data in any reports, papers, or presentations. If you publish these data, please include a statement similar to: "Some or all of the data described in this article were produced by NOAA through its National Status and Trends Program". |
Metadata Access Constraints | |
Metadata Use Constraints |
Distribution Information
Start Date | |
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» Download URL | https://products.coastalscience.noaa.gov/collections/ltmonitoring/nsandt/default.aspx |
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File Type (Deprecated) | XML |
Distribution Format | XML (Structured Text) |
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» Download URL | https://products.coastalscience.noaa.gov/collections/ltmonitoring/nsandt/default.aspx |
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Live Data and Maps |
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File Type (Deprecated) | ASCII |
Distribution Format | Text (Unstructured) |
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URLs
URL | https://products.coastalscience.noaa.gov/collections/ltmonitoring/nsandt/default.aspx |
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URL Type | Online Resource |
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Activity Log
Activity Time | 2016-11-16 |
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Activity Type | |
Responsible Party | |
Description |
Date that the source FGDC record was last modified. |
Activity Time | 2017-04-05 |
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Activity Type | |
Responsible Party | |
Description |
Converted from FGDC Content Standards for Digital Geospatial Metadata (version FGDC-STD-001-1998) using 'fgdc_to_inport_xml.pl' script. Contact Tyler Christensen (NOS) for details. |
Activity Time | 2017-09-13 |
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Activity Type | |
Responsible Party | |
Description |
Partial upload of Spatial Info section only. |
Activity Time | 2018-02-08 |
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Partial upload of Positional Accuracy fields only. |
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Technical Environment
Description |
Microsoft Windows 2000 Version 5.0 (Build 2195) Service Pack 4; ESRI ArcCatalog 8.3.0.800 |
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Data Quality
Representativeness | |
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Accuracy |
The quality of the analytical data generated by the NSandT Program is overseen by the QA Project component, which has been in operation since 1985 and is designed to document sampling and analytical procedures, and to reduce intra-laboratory and inter-laboratory variation. The QA Project documentation will facilitate comparisons among different monitoring programs with similar QA activities and thus will extend the temporal and spatial scale of such programs. To document laboratory expertise, the QA Project requires all NSandT laboratories to participate in a continuing series of intercomparison exercises utilizing a variety of materials. |
Analytical Accuracy | |
Horizontal Positional Accuracy |
The same kind of field/site data have been supplied since the start of the Benthic Surveillance Project, in 1984. Original site coordinates were derived from Loran-C time conversions. Early sites information resulting from Loran-C was converted from time delay information to latitudes and longitudes. These earlier data may be suspect when sites were located close to large structures that could have interfered with accurate time delays. When GPS was first available the signal was intentionally degraded so earlier coordinate information, even if it resulted from GPS, is not as accurate as data would be today. Because fish are not sessile, fish trawls have been made along different tracks in the water body of interest. The latitude/ longitude coordinates provided in this file represent a site center and trawling occurs within a 1 km radius of this location. |
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Completeness Report |
Analytical protocols for the quantification of the NSandT organic contaminants were developed by MacLeod et al. (1984) at the NMFS (National Marine Fisheries Service) Northwest Fisheries Science Center in Seattle, WA. These methods were prescribed for all NMFS laboratories participating in the Benthic Surveillance Program, when it began in 1984. Three NMFS laboratories used these methods in 1984: Northeast Fisheries Science Center (NEFSC), Gloucester, MA; Southeast Fisheries Science Center (SEFSC), Charleston, SC; and Northwest Fisheries Science Center (NWFSC), Seattle WA. The philosophy associated with the development of exacting protocols for the quantification of organic contaminants was that the same analytical methods would increase the likelihood of data being comparable among laboratories. Even though interlaboratory comparisons were initiated at the start of the NSandT Program, it was felt that a method-driven QA and analytical effort for the quantification of organic contaminants was the best way to begin. In 1985, the protocols were updated by MacLeod et al., 1985. This method has been further edited and can be found in volume 1 of Technical Memorandum 71. The NSandT Mussel Watch Project (MWP) began in 1986. At that time, both the MWP and BSP laboratories were allowed to use any analytical method if it could be proven that the proposed alternate procedure was equal to or better than earlier MacLeod et al. (1984,1985) methods. |
Conceptual Consistency |
Fish in the correct size range were dissected in the onboard laboratory immediately after collection. This ensured that a determination could be made regarding whether sufficient material had been collected and whether the sample material was of high quality. If either one of these criteria was not met, the opportunity existed to continue sample collection. Also, field dissection minimizes contamination problems associated with dissection of frozen fish samples. Frozen fish tissues when thawed, may lose their integrity and one tissue type may contaminate another (e.g., a liver sample could be contaminated by PAH metabolites from the bile duct).Because most fish were dissected onboard ship, a special effort was made to develop an environment as close to clean-room conditions as possible. All fish were dissected in positive pressure laminar flow hoods. Air was drawn into the laminar flow hood from above and filtered by a high efficiency particle attenuator (HEPA) filter before it passed over the fish samples. Stainless steel tools were used to dissect fish for organic analysis. Titanium tools were used to dissect fish for trace metal analyses because tools made of this element do not pose the problem of introducing nickel, chromium, and/or iron into the specimens to be analyzed. Specimens were analyzed for the latter three elements by the NSandT Program. After knives had been sharpened, and before dissections began at a new site or of a new species, the dissection equipment was thoroughly cleaned with detergent solution, rinsed extensively with tap water, rinsed in distilled or high-purity water (i.e., milli-Q or HPLC-grade water), rinsed with isopropanol (dichloromethane before 1990) under a fume hood, followed by a rinse with distilled water, and placed on a similarly cleaned Teflon cutting board that was allowed to air-dry in the laminar-flow hood. Between individual fish of the same species at the same site, the tools were rinsed with distilled water before any fluid or tissue had a chance to dry on the knife. Sexually mature fish were primarily used in this program, determined by size of each species. |
» Quality Control Procedures Employed |
Data Management
» Have Resources for Management of these Data Been Identified? | |
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» Approximate Percentage of Budget for these Data Devoted to Data Management | |
» Do these Data Comply with the Data Access Directive? | |
» Is Access to the Data Limited Based on an Approved Waiver? | |
» If Distributor (Data Hosting Service) is Needed, Please Indicate | |
» Approximate Delay Between Data Collection and Dissemination | |
» If Delay is Longer than Latency of Automated Processing, Indicate Under What Authority Data Access is Delayed |
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» Actual or Planned Long-Term Data Archive Location | |
» If World Data Center or Other, Specify | |
» If To Be Determined, Unable to Archive, or No Archiving Intended, Explain |
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» Approximate Delay Between Data Collection and Archiving | |
» How Will the Data Be Protected from Accidental or Malicious Modification or Deletion Prior to Receipt by the Archive? |
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Lineage
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Process Steps
Process Step Number | 1 |
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» Description |
The primary collection apparatus was Otter trawls. Occasionally, fish were taken with hook and line, or with seine nets. These alternate collection methods were necessary because larger fish, such as older Atlantic croaker, were able to avoid an Otter trawl, or were found in untrawlable habitats such as shallow water, along marsh edges, and over oyster reefs. Fish liver tissue samples were analyzed for cytochrome P4501A (CYP1A) activities in liver via analysis for aryl hydrocarbon hydrolase (ahh).The analytical instruments were calibrated by standard laboratory procedures including: constructing calibration curves, running blank and spiked quality control samples, and analyzing standard reference materials.Process Date Range is 1988 - 1992 |
Process Date/Time | 1992-01-01 00:00:00 |
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Acquisition Information
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FAQs
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Child Items
Rubric scores updated every 15m
Score | Type | Title |
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Entity (ENT) | Dataset Parameters for Benthic Surveillance Aryl Hydrocarbon Hydrolase data | |
Related Items
Item Type | Relationship Type | Title |
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Catalog Details
Catalog Item ID | 39257 |
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Metadata Record Created By | Tyler Christensen |
Metadata Record Created | 2017-04-05 12:51+0000 |
Metadata Record Last Modified By | SysAdmin InPortAdmin |
» Metadata Record Last Modified | 2023-10-17 16:12+0000 |
Metadata Record Published | 2018-02-08 |
Owner Org | NCCOS |
Metadata Publication Status | Published Externally |
Do Not Publish? | N |
Metadata Workflow State | Published / External |
Metadata Last Review Date | 2018-02-08 |
Metadata Review Frequency | 1 Year |
Metadata Next Review Date | 2019-02-08 |
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