40259
Columbia River ESI: FISH (Fish Polygons)
Columbia_river_WA_OR_fish
Data Set
Published / External
46670
Columbia River (Washington/Oregon), 2004
Project
Completed
2004-11
This data set contains sensitive biological resource data for marine, estuarine, anadromous, and freshwater fish species in Columbia River. Vector polygons in this data set represent locations of fish distribution, concentration areas, spawning areas, and salmon spawning runs. Species specific abundance, seasonality, status, life history, and source information are stored in relational data tables (described below) designed to be used in conjunction with this spatial data layer.This data set comprises a portion of the Environmental Sensitivity Index (ESI) data for Columbia River. ESI data characterize the marine and coastal environments and wildlife by their sensitivity to spilled oil. The ESI data include information for three main components: shoreline habitats, sensitive biological resources, and human-use resources. See also the FISHL (Fish Lines) data layer, part of the larger Columbia River ESI database, for additional fish information.
The ESI data were collected, mapped, and digitized to provide environmental data for oil spill planning and response. The Clean Water Act with amendments by the Oil Pollution Act of 1990 requires response plans for immediate and effective protection of sensitive resources.
1677
Prepared by Research Planning, Inc., Columbia, South Carolina for the National Oceanic and Atmospheric Administration (NOAA), National Ocean Service, Office of Response and Restoration, Hazardous Materials Response Division, Seattle, Washington; Coastal Storms Initiative; U.S. Fish and Wildlife Service; NOAA Fisheries; State of Oregon; and State of Washington.
Resource Description - ESI Atlas for Columbia River
Theme
ISO 19115 Topic Category
environment
Theme
ISO 19115 Topic Category
oceans
Theme
NOS Topic Category
Environmental Monitoring
Theme
Coastal Zone Management
Theme
Coastal resources
Theme
ESI
Theme
Fish
Theme
Oil spill planning
Theme
Sensitivity maps
Theme
Wildlife
Spatial
Columbia River
Office of Response and Restoration
Silver Spring
MD
Data Set
None Planned
vector digital data
In addition to the geographic data layers, six relational attribute or data tables, BIORES, BREED, SEASONAL, SOURCES, SPECIES, and STATUS, are used to store the complex biological data in the ESI data structure. The geographic data layer containing biological resource information (in this case, FISH) is linked to the Biological Resources table (BIORES) using the unique ID and the lookup table BIO_LUT, or it can be linked directly using RARNUM. The ID is a unique combination of the atlas number (for the Columbia River atlas, the number is 41), an element/layer specific number (BIRDS are layer 1, FISH are layer 2, etc.), and a unique record number. The RARNUM represents a unique combination of species, seasonalities, concentrations, and source information. For each of these groupings, a number is generated. That number is concatenated with the atlas number to create a "resource at risk" number that is unique across atlases. BIORES and the other relational data tables are described below in detail. See the Browse_Graphic section for a link to the entity-relationship diagram, which describes the way these tables relate to the geographic data layers and other attribute tables in the ESI data structure.Due to the complexity of the relational database model, the data items are also post-processed into a flat file format. This table, called BIOFILE, may be used in place of the relational files described below to ease simple data queries. The items in the flat file are ELEMENT, SUBELEMENT, NAME, GEN_SPEC, S, F, NHP, DATE_PUB, CONC, JAN, FEB, MAR, APR, MAY, JUN, JUL, AUG, SEP, OCT, NOV, DEC, BREED1, BREED2, BREED3, BREED4, BREED5, RARNUM, G_SOURCE, S_SOURCE, and BREED. All of these items are the same as their counterparts in the individual data tables described below, except the BREED1-BREED5 and BREED items. BREED is a newly generated variable used to link to the BREED_DT data table, a modified, more compact version of the relational BREED data table. BREED1-BREED5 give a text summary of when each life stage occurs within the associated map object. The life stages referred to are the same as those listed in the Detailed_Description of the BREED data table. The link to the BIOFILE may be made through the BIO_LUT, using ID to link to RARNUM, or BIOFILE may be linked directly to the RARNUM in each of the geographic layer's attribute data tables. As mentioned, BREED_DT is an auxiliary support data table to the flat file structure, which allows the user to do searches based on month for seasonal breeding activities. The link from the flat file to BREED_DT is the BREED item.A second supporting data table is SOURCES. This is the same as the source file described above, and the link from the flat file is both G_SOURCE and S_SOURCE. It should be noted that although the flat file eases data query, it is not a normalized database structure, and actual updates performed by the states and other responsible agencies should be done using the relational data tables. The entity-relationship diagram, describing relationships between attribute tables in the ESI data structure, does NOT include the BIOFILE data table, and this data table is NOT described in detail below.
Unknown
Although these data have been processed successfully on a computer system at the National Oceanic and Atmospheric Administration, no warranty, expressed or implied, is made by NOAA regarding the utility of the data on any other system, nor shall the act of distribution constitute any such warranty. NOAA warrants the delivery of this product in computer-readable format, and will offer a replacement copy of the product when the product is determined unreadable by computer-input peripherals, or when the physical medium is delivered in damaged condition.
This project was supported by the National Oceanic and Atmospheric Administration (NOAA), National Ocean Service, Office of Response and Restoration, Hazardous Materials Response Division, Seattle, Washington; Coastal Storms Initiative; U.S. Fish and Wildlife Service; NOAA Fisheries; State of Oregon; and State of Washington.
42609
FISH.PAT
FISH.PAT
Published / External
Completed
The FISH.PAT table contains attribute information for the vector polygons representing fish distribution, concentration areas, spawning areas, and salmon spawning runs. Note that all attribute information is stored in a series of relational files, described below. See the Browse_Graphic section for a link to the entity-relationship diagram, which describes the relationships between attribute tables in the ESI data structure. | Description Source: Research Planning, Inc.
Converted from FGDC using 'fgdc_to_inport_xml_entity.pl' script.
1
ID
NUMBER
No
No
Active
An identifier that links vector objects in the biology data layers to records in the BIO_LUT data table. ID is a concatenation of atlas number (41), element number (2), and record number. ID values of 9999 are holes in polygons and do not contain information. | Description Source: NOAA
410200002 - 410200784
2
RARNUM
NUMBER
No
No
Active
An identifier that links directly to the BIORES table or the flat format BIOFILE table. RARNUM values of 0 are holes in polygons and do not contain information. | Description Source: NOAA
41000132 - 41000245
42610
BIO_LUT
BIO_LUT
Published / External
Completed
The data table BIO_LUT is a lookup table that contains items necessary for linking vector objects in the biological data layers with the BIORES data table. Note that all attribute information is stored in a series of relational files, described below. See the Browse_Graphic section for a link to the entity-relationship diagram, which describes the way this table relates to other attribute tables in the ESI data structure. | Description Source: Research Planning, Inc.
Converted from FGDC using 'fgdc_to_inport_xml_entity.pl' script.
1
RARNUM
NUMBER
No
No
Active
An identifier that links records in the BIO_LUT data table to records in the BIORES data table or the flat format BIOFILE data table. RARNUM values of 0 are holes in polygons and do not contain information. | Description Source: NOAA
41000001 - 41000290
2
ID
NUMBER
No
No
Active
An identifier that links vector objects in the biology data layers to records in the BIO_LUT data table. ID is a concatenation of atlas number (41), element number (2), and record number. ID values of 9999 are holes in polygons and do not contain information. | Description Source: NOAA
410100002 - 413400015
42611
BIORES
BIORES
Published / External
Completed
The data table BIORES contains both biological attribute data and items necessary for linking vector objects in the biological data layers via the BIO_LUT data table to other associated data tables. See the Browse_Graphic section for a link to the entity-relationship diagram, which describes the way this table relates to other attribute tables in the ESI data structure. | Description Source: Research Planning, Inc.
Converted from FGDC using 'fgdc_to_inport_xml_entity.pl' script.
1
RARNUM
NUMBER
No
No
Active
An identifier that links records in the BIORES data table to records in the BIO_LUT data table or the flat format BIOFILE data table. | Description Source: NOAA
041000001 - 041000290
2
SPECIES_ID
NUMBER
No
No
Active
Numeric identifier for each species that is unique within each element and refers to a nationwide master ESI species list maintained at NOAA. | Description Source: Research Planning, Inc.
1 - N
3
CONC
Unknown
No
No
Active
The field CONC refers to "concentration," abundance, or density values of a species at a particular location. No quantitative concentration data were available for fish, so the CONC field may contain a descriptive term, such as "HIGH", or may be populated with "-", to indicate that no concentration information was available. | Description Source: Research Planning, Inc.
Acceptable values change from atlas to atlas
4
SEASON_ID
NUMBER
No
No
Active
Numeric identifier for the unique monthly presence and life history characteristics of each species at a given location. | Description Source: Research Planning, Inc.
1 - N
5
G_SOURCE
NUMBER
No
No
Active
Geographic source identifier that links records in the BIORES data table to records in the SOURCES data table. | Description Source: Research Planning, Inc.
1 - N
6
S_SOURCE
NUMBER
No
No
Active
Seasonality source identifier that links records in the BIORES data table to records in the SOURCES data table. | Description Source: Research Planning, Inc.
1 - N
7
ELEMENT
VARCHAR
No
No
Active
Major categories of biological data | Description Source: Research Planning, Inc.
BIRD: Birds | FISH: Fish | HABITAT: Habitats and Plants | INVERT: Invertebrates | M_MAMMAL: Marine Mammals | REPTILE: Reptiles and Amphibians | T_MAMMAL: Terrestrial Mammals |
8
EL_SPE
VARCHAR
No
No
Active
Concatenation of ELEMENT and SPECIES_ID. This item links records in the BIORES data table to records in the SPECIES and STATUS data tables. | Description Source: Research Planning, Inc.
E#####: Where E is the first character of ELEMENT and the next five characters are SPECIES_ID (e.g. ELEMENT = 'BIRD' and SPECIES_ID = 1; EL_SPE = 'B00001'). |
9
EL_SPE_SEA
VARCHAR
No
No
Active
Concatenation of ELEMENT, SPECIES_ID, and SEASON_ID. This item links records in the BIORES data table to records in the SEASONAL and BREED data tables. | Description Source: Research Planning, Inc.
E#######: Where E is the first character of ELEMENT, the next five characters are SPECIES_ID, and the last two characters are SEASON_ID (e.g. ELEMENT = 'BIRD', SPECIES_ID = 1 and SEASON_ID = 1; EL_SPE_SEA = 'B0000101'). |
42612
SPECIES
SPECIES
Published / External
Completed
The data table SPECIES identifies all species in the ESI data set. See the Browse_Graphic section for a link to the entity-relationship diagram, which describes the way this table relates to other attribute tables in the ESI data structure. Refer to the Completeness_Report for a list of layer-specific species. | Description Source: Research Planning, Inc.
Converted from FGDC using 'fgdc_to_inport_xml_entity.pl' script.
1
SPECIES_ID
NUMBER
No
No
Active
Numeric identifier for each species that is unique within each element and refers to a nationwide master ESI species list maintained at NOAA. | Description Source: Research Planning, Inc.
1 - N
2
NAME
Unknown
No
No
Active
Species common name for the entire ESI data set | Description Source: Research Planning, Inc.
Acceptable values change from atlas to atlas
3
GEN_SPEC
Unknown
No
No
Active
Species scientific name for the entire ESI data set | Description Source: Research Planning, Inc.
Acceptable values change from atlas to atlas
4
ELEMENT
VARCHAR
No
No
Active
Major categories of biological data | Description Source: Research Planning, Inc.
BIRD: Birds | FISH: Fish | HABITAT: Habitats and Plants | INVERT: Invertebrates | M_MAMMAL: Marine Mammals | REPTILE: Reptiles and Amphibians | T_MAMMAL: Terrestrial Mammals |
5
SUBELEMENT
VARCHAR
No
No
Active
Element subgroup delineating a logical grouping of species | Description Source: Research Planning, Inc.
bivalve: Bivalve | crab: Crab | diadromous: Diadromous fish | diving: Diving bird | e_nursery: Estuarine nursery fish | fav: Floating aquatic vegetation | freshwater: Freshwater fish | gull_tern: Gull or tern | passerine: Passerine bird | pinniped: Pinniped | raptor: Raptor | sav: Submerged aquatic vegetation | shorebird: Shorebird | sm_mammal: Small mammal | turtle: Turtle | ungulate: Ungulate | wading: Wading bird | waterfowl: Waterfowl |
6
NHP
VARCHAR
No
No
Active
Natural Heritage Program global ranking. When no information was provided on the global rank for a species, the field is blank. | Description Source: Network of Natural Heritage Program
NHP Global Conservation Status Rank: Natural Heritage Program
7
DATE_PUB
VARCHAR
No
No
Active
Date of NHP listing | Description Source: Research Planning, Inc.
YYYYMM: YYYY for year and optionally MM for month | 0: No information was provided on the global rank for the species |
8
EL_SPE
VARCHAR
No
No
Active
Concatenation of ELEMENT and SPECIES_ID. This item links records in the SPECIES data table to records in the BIORES and STATUS data tables. | Description Source: Research Planning, Inc.
E#####: Where E is the first character of ELEMENT and the next five characters are SPECIES_ID (e.g. ELEMENT = 'BIRD' and SPECIES_ID = 1; EL_SPE = 'B00001'). |
42613
SEASONAL
SEASONAL
Published / External
Completed
The data table SEASONAL contains information on the seasonal presence of each species associated with each spatial vector object. See the Browse_Graphic section for a link to the entity-relationship diagram, which describes the way this table relates to other attribute tables in the ESI data structure. | Description Source: Research Planning, Inc.
Converted from FGDC using 'fgdc_to_inport_xml_entity.pl' script.
1
ELEMENT
VARCHAR
No
No
Active
Major categories of biological data | Description Source: Research Planning, Inc.
BIRD: Birds | FISH: Fish | HABITAT: Habitats and Plants | INVERT: Invertebrates | M_MAMMAL: Marine Mammals | REPTILE: Reptiles and Amphibians | T_MAMMAL: Terrestrial Mammals |
2
SPECIES_ID
NUMBER
No
No
Active
Numeric identifier for each species that is unique within each element and refers to a nationwide ESI species list maintained at NOAA. | Description Source: Research Planning, Inc.
1 - N
3
SEASON_ID
NUMBER
No
No
Active
Numeric identifier for the unique monthly presence and life history characteristics of each species at a given location. | Description Source: Research Planning, Inc.
1 - N
4
JAN
VARCHAR
No
No
Active
January | Description Source: Research Planning, Inc.
X: Present in January |
5
FEB
VARCHAR
No
No
Active
February | Description Source: Research Planning, Inc.
X: Present in February |
6
MAR
VARCHAR
No
No
Active
March | Description Source: Research Planning, Inc.
X: Present in March |
7
APR
VARCHAR
No
No
Active
April | Description Source: Research Planning, Inc.
X: Present in April |
8
MAY
VARCHAR
No
No
Active
May | Description Source: Research Planning, Inc.
X: Present in May |
9
JUN
VARCHAR
No
No
Active
June | Description Source: Research Planning, Inc.
X: Present in June |
10
JUL
VARCHAR
No
No
Active
July | Description Source: Research Planning, Inc.
X: Present in July |
11
AUG
VARCHAR
No
No
Active
August | Description Source: Research Planning, Inc.
X: Present in August |
12
SEP
VARCHAR
No
No
Active
September | Description Source: Research Planning, Inc.
X: Present in September |
13
OCT
VARCHAR
No
No
Active
October | Description Source: Research Planning, Inc.
X: Present in October |
14
NOV
VARCHAR
No
No
Active
November | Description Source: Research Planning, Inc.
X: Present in November |
15
DEC
VARCHAR
No
No
Active
December | Description Source: Research Planning, Inc.
X: Present in December |
16
EL_SPE_SEA
VARCHAR
No
No
Active
Concatenation of ELEMENT, SPECIES_ID, and SEASON_ID. This item links records in the SEASONAL data table to records in the BIORES and BREED data tables. | Description Source: Research Planning, Inc.
E#######: Where E is the first character of ELEMENT, the next five characters are SPECIES_ID, and the last two characters are SEASON_ID (e.g. ELEMENT = 'BIRD', SPECIES_ID = 1 and SEASON_ID = 1; EL_SPE_SEA = 'B0000101'). |
42614
BREED
BREED
Published / External
Completed
The data table BREED identifies the monthly presence of certain life-history stages or activities for each species at a given location. | Description Source: Research Planning, Inc.
Converted from FGDC using 'fgdc_to_inport_xml_entity.pl' script.
1
EL_SPE_SEA
VARCHAR
No
No
Active
Concatenation of ELEMENT, SPECIES_ID, and SEASON_ID. This item links records in the BREED data table to records in the BIORES and SEASONAL data tables. | Description Source: Research Planning, Inc.
E#######: Where E is the first character of ELEMENT, the next five characters are SPECIES_ID, and the last two characters are SEASON_ID (e.g. ELEMENT = 'BIRD', SPECIES_ID = 1 and SEASON_ID = 1; EL_SPE_SEA = 'B0000101'). |
2
MONTH
NUMBER
No
No
Active
Two-digit calendar month. Each life history stage or activity type for a particular species can have up to 12 records to account for each month of the year. | Description Source: Research Planning, Inc.
1 - 12
3
BREED1
VARCHAR
No
No
Active
Life history stage or activity type, where: if ELEMENT is "BIRD" then BREED1 = nesting; if ELEMENT is "FISH" then BREED1 = spawning; if ELEMENT is "INVERT" then BREED1 = spawning; if ELEMENT is "REPTILE" then BREED1 = nesting; if ELEMENT is "M_MAMMAL" then BREED1 = mating. This attribute is not used for HABITAT or T_MAMMAL elements. | Description Source: Research Planning, Inc.
Y: Life-history stage or activity present | N: Life-history stage or activity not present | -: Breed category not used or not appropriate for record(s) in question |
4
BREED2
VARCHAR
No
No
Active
Life history stage or activity type, where: if ELEMENT is "BIRD" then BREED2 = migrating; if ELEMENT is "FISH" then BREED2 = eggs; if ELEMENT is "INVERT" then BREED2 = eggs; if ELEMENT is "REPTILE" then BREED2 = hatching; if ELEMENT is "M_MAMMAL" then BREED2 = calving. This attribute is not used for HABITAT or T_MAMMAL elements. | Description Source: Research Planning, Inc.
Y: Life-history stage or activity present | N: Life-history stage or activity not present | -: Breed category not used or not appropriate for record(s) in question |
5
BREED3
VARCHAR
No
No
Active
Life history stage or activity type, where: if ELEMENT is "BIRD" then BREED3 = molting; if ELEMENT is "FISH" then BREED3 = larvae; if ELEMENT is "INVERT" then BREED3 = larvae; if ELEMENT is "REPTILE" then BREED3 = internesting; if ELEMENT is "M_MAMMAL" then BREED3 = pupping. This attribute is not used for HABITAT or T_MAMMAL elements. | Description Source: Research Planning, Inc.
Y: Life-history stage or activity present | N: Life-history stage or activity not present | -: Breed category not used or not appropriate for record(s) in question |
6
BREED4
VARCHAR
No
No
Active
Life history stage or activity type, where: if ELEMENT is "FISH" then BREED4 = juveniles; if ELEMENT is "INVERT" then BREED4 = juveniles; if ELEMENT is "REPTILE" then BREED4 = juveniles; if ELEMENT is "M_MAMMAL" then BREED4 = molting. This attribute is not used for BIRD, HABITAT, or T_MAMMAL elements. | Description Source: Research Planning, Inc.
Y: Life-history stage or activity present | N: Life-history stage or activity not present | -: Breed category not used or not appropriate for record(s) in question |
7
BREED5
VARCHAR
No
No
Active
Life history stage or activity type, where: if ELEMENT is "FISH" then BREED5 = adults; if ELEMENT is "INVERT" then BREED5 = adults; if ELEMENT is "REPTILE" then BREED5 = adults. This attribute is not used for BIRD, M_MAMMAL, HABITAT, or T_MAMMAL elements. | Description Source: Research Planning, Inc.
Y: Life-history stage or activity present | N: Life-history stage or activity not present | -: Breed category not used or not appropriate for record(s) in question |
42615
SOURCES
SOURCES
Published / External
Completed
The data table SOURCES contains the primary sources used to create the ESI data set. See the Browse_Graphic section for a link to the entity-relationship diagram, which describes the way this table relates to other attribute tables in the ESI data structure. | Description Source: Research Planning, Inc.
Converted from FGDC using 'fgdc_to_inport_xml_entity.pl' script.
1
SOURCE_ID
NUMBER
No
No
Active
Source identifier that links records in the SOURCES data table to the items G_SOURCE and A_SOURCE in the SOC_DAT table, and to G_SOURCE and S_SOURCE in the BIORES table. | Description Source: Research Planning, Inc.
1 - N
2
ORIGINATOR
Unknown
No
No
Active
Author or developer of source material or data set | Description Source: Research Planning, Inc.
Acceptable values change from atlas to atlas
3
DATE_PUB
VARCHAR
No
No
Active
Date of source material, publication, or date of personal communication with expert source | Description Source: Research Planning, Inc.
YYYYMM: YYYY for year and optionally MM for month |
4
TITLE
Unknown
No
No
Active
Title of source material or data | Description Source: Research Planning, Inc.
Acceptable values change from atlas to atlas
5
DATA_FORMAT
Unknown
No
No
Active
The format of the source material | Description Source: Research Planning, Inc.
Acceptable values change from atlas to atlas
6
PUBLICATION
Unknown
No
No
Active
Additional citation information | Description Source: Research Planning, Inc.
Acceptable values change from atlas to atlas
7
SCALE
VARCHAR
No
No
Active
Scale denominator of the source | Description Source: Research Planning, Inc.
integer: Any integer |
8
TIME_PERIOD
VARCHAR
No
No
Active
Date(s) of data collection that the source material is based upon. | Description Source: Research Planning, Inc.
MM/DD/YY: Month/Day/Year | MM/YYYY: Month/Year | UNKNOWN: Date information unknown |
42616
STATUS
STATUS
Published / External
Completed
The data table STATUS identifies the species that are listed as threatened or endangered by a state or federal authority. See the Browse_Graphic section for a link to the entity-relationship diagram, which describes the way this table relates to other attribute tables in the ESI data structure. | Description Source: Research Planning, Inc.
Converted from FGDC using 'fgdc_to_inport_xml_entity.pl' script.
1
ELEMENT
VARCHAR
No
No
Active
Major categories of biological data | Description Source: Research Planning, Inc.
BIRD: Birds | FISH: Fish | HABITAT: Habitats and Plants | INVERT: Invertebrates | M_MAMMAL: Marine Mammals | REPTILE: Reptiles and Amphibians | T_MAMMAL: Terrestrial Mammals |
2
SPECIES_ID
NUMBER
No
No
Active
Numeric identifier for each species that is unique within each element and refers to a nationwide master ESI species list maintained at NOAA. | Description Source: Research Planning, Inc.
1 - N
3
S
VARCHAR
No
No
Active
State threatened or endangered status | Description Source: Research Planning, Inc.
E: Endangered on state list | T: Threatened on state list | C: Species of Special Concern | *: Refer to the table RUNS_DAT for threatened or endangered status. |
4
F
VARCHAR
No
No
Active
Federal threatened or endangered status | Description Source: Research Planning, Inc.
E: Endangered on federal list | T: Threatened on federal list | C: Species of Special Concern | *: Refer to the table RUNS_DAT for threatened or endangered status. |
5
STATE
Unknown
No
No
Active
Two-letter state abbreviation | Description Source: Research Planning, Inc.
Acceptable values change from atlas to atlas
6
S_DATE
VARCHAR
No
No
Active
Publication date of source material used to assign state status values for each species, if used. | Description Source: Research Planning, Inc.
YYYYMM: YYYY for year and optionally MM for month |
7
F_DATE
VARCHAR
No
No
Active
Publication date of source material used to assign federal status values for each species, if used. | Description Source: Research Planning, Inc.
YYYYMM: YYYY for year and optionally MM for month |
8
EL_SPE
VARCHAR
No
No
Active
Concatenation of ELEMENT and SPECIES_ID. This item links records in the STATUS data table to records in the BIORES, SPECIES, and RUNS_DAT data tables. | Description Source: Research Planning, Inc.
E#####: Where E is the first character of ELEMENT and the next five characters are SPECIES_ID (e.g. ELEMENT = 'BIRD' and SPECIES_ID = 1; EL_SPE = 'B00001'). |
42617
RUNS_DAT
RUNS_DAT
Published / External
Completed
The data table RUNS_DAT identifies anadromous fish runs that are listed as threatened, endangered, sensitive-critical, or candidate by a state or federal authority. See the Browse_Graphic section for a link to the entity-relationship diagram, which describes the way this table relates to other attribute tables in the ESI data structure. | Description Source: Research Planning, Inc.
Converted from FGDC using 'fgdc_to_inport_xml_entity.pl' script.
1
EL_SPE
VARCHAR
No
No
Active
Concatenation of ELEMENT and SPECIES_ID. This item links records in the RUNS_DAT table to records in the STATUS table. | Description Source: Research Planning, Inc.
E#####: Where E is the first character of ELEMENT and the next five characters are SPECIES_ID (e.g. ELEMENT = 'BIRD' and SPECIES_ID = 1; EL_SPE = 'B00001'). |
2
SPECIES
Unknown
No
No
Active
Species common name. This field may also include the season in which the species is running [for example, "Chinook Salmon (Spring)"]. | Description Source: Research Planning, Inc.
Acceptable values change from atlas to atlas
3
RUN
Unknown
No
No
Active
Location of the run in which the species is listed as threatened, endangered, sensitive-critical, or a candidate. | Description Source: Research Planning, Inc.
Acceptable values change from atlas to atlas
4
OR
VARCHAR
No
No
Active
Threatened or endangered status for the state of Oregon. | Description Source: Research Planning, Inc.
E: Listed as endangered by the state of Oregon | T: Listed as threatened by the state of Oregon | S-C: Listed as a sensitive-critical species by the state of Oregon | NL: Not listed by the state of Oregon |
5
WA
VARCHAR
No
No
Active
Threatened or endangered status for the state of Washington | Description Source: Research Planning, Inc.
Cand.: Listed as candidate species by the state of Washington | NL: Not listed by the state of Washington |
6
FEDERAL
VARCHAR
No
No
Active
Threatened or endangered status for the Federal Endangered Species Act | Description Source: Research Planning, Inc.
E: Listed as endangered by the Federal Endangered Species Act | T: Listed as threatened by the Federal Endangered Species Act | Cand.: Listed as candidate species by the Federal Endangered Species Act | NL: Not listed by the Federal Endangered Species Act |
7
ESA_YEAR
VARCHAR
No
No
Active
Year the species was listed by the Federal Endangered Species Act. | Description Source: Research Planning, Inc.
YYYYMM: YYYY for year and optionally MM for month | 0: Species is not federally ranked |
Data Steward
2004-11
Position
ESI Program Manager
orr.esi@noaa.gov
7600 Sand Point Way NE
Seattle
WA
98115
Distributor
2004-11
Position
ESI Program Manager
orr.esi@noaa.gov
7600 Sand Point Way NE
Seattle
WA
98115
Metadata Contact
2004-11
Position
ESI Program Manager
orr.esi@noaa.gov
7600 Sand Point Way NE
Seattle
WA
98115
Point of Contact
2004-11
Position
ESI Program Manager
orr.esi@noaa.gov
7600 Sand Point Way NE
Seattle
WA
98115
The biological data were compiled during 2003-2004. The currentness dates for these data range from 1979 to 2004 and are documented in the Lineage section.
-124.125
-120.67375
46.375
45.3
Range
1979
2004
Yes
Yes
788
Yes
219684
Yes
788
Yes
1186
Unclassified
Contact NOAA for distribution options (see Distributor). ESI data are processed into multiple formats to make them useful to a wider community of GIS/mapping users. Distribution formats include ARC export, MOSS and Shape files, and MARPLOT map folders. An ArcView ESI project and ESI_Viewer product are also included on the distribution CDs for ease of use of the ESI data. The database files are distributed both in the NOAA standard relational database format (see NOAA Technical Memorandum NOS ORCA 115) and in a simplified desktop flat file format. This metadata document includes information on both of these database formats.;
None
DO NOT USE MAPS FOR NAVIGATIONAL PURPOSES.Besides the above warning, there are no use constraints on these data. Note that the ESI database should not be used to the exclusion of other pertinent data or information held by state or federal agencies or other organizations. Likewise, information contained in the database cannot be used in place of consultations with environmental, natural resource, and cultural resource agencies, or in place of field surveys. Recognize that the information contained in the ESI database represents known concentration areas or occurrences of natural, cultural, and human-use resources, but does not necessarily represent the full distribution or range of each species or resource. This is particularly important to recognize when considering potential impacts to protected resources, such as endangered species, wetlands, etc. Acknowledgment of the originators, publishers, contributors, and sources listed would be appreciated in products derived from these data.
http://response.restoration.noaa.gov/esi
Online Resource
2004-11
Date that the source FGDC record was last modified.
2017-04-05
Converted from Content Standards for Digital Geospatial Metadata (version FGDC-STD-001-1998) using 'fgdc_to_inport_xml.pl' script. Contact Tyler Christensen (NOS) for details.
2017-09-13
Partial upload of Spatial Info section only.
2017-11-01
Replaced entire Lineage section to populate new Source Contribution field.
2018-02-08
Partial upload of Positional Accuracy fields only.
The software packages used to develop the atlas are Environmental Systems Research Institute's ARC/INFO(r) (version 8.3) and SQL SERVER(r) (version 7.0). The hardware configuration is PC's with Windows Operating System (NT4.0/2000).The Spatial_Data_Organization_Information section refers only to the source files in the ARC export format. The following files are included in that data set: birds.e00, esi.e00, fish.e00, fishl.e00, habitats.e00, hydro.e00, index.e00, invert.e00, m_mammal.e00, m_mampt.e00, mgt.e00, nests.e00, nwi.e00, reptiles.e00, socecon.e00, t_mammal.e00. Associated relational and desktop data tables provided in Arc export and text format are bio_lut, biofile, biores, breed, breed_dt, runs_dat, seasonal, soc_dat, soc_lut, sources, species, and status.
A multi-stage error checking process is used to verify both attribute accuracy and logical consistency throughout data production. The process includes a standardized data entry methodology, hardcopy data review by in-house and external resource experts, a final Quality Assurance/Quality Control (QA/QC) process, and multiple automated logical consistency checks. Quantitative data (such as densities, counts, abundances, or concentrations) provided by resource experts for inclusion in the data set may vary widely in attribute accuracy, depending upon the methodology used to collect and compile such data. For a more detailed evaluation of source data attribute accuracy, contact the sources listed in the Lineage section.
Most of the spatial components of the biological data sets are developed using regional experts who estimate concentration areas. It is difficult to estimate the positional accuracy of such data, except to state that they are compiled on hardcopy base maps with a scale of 1:24,000. Some of the spatial components of the biological data sets are developed from pre-existing digital sources and reflect the positional accuracy of these original data. See the Lineage and Process_Description sections for more information on the original data source and how these data were integrated or manipulated to create the final data set. Note that biological resource data by their very nature are considered "fuzzy", and this should be understood when considering the positional accuracy of vector digital objects representing these resources.
These data represent a synthesis of expert knowledge, digital data, and hardcopy maps. Salmon spawning runs were adapted by NOAA from Washington Department of Fish and Wildlife (WDFW) and Oregon Fish and Wildlife digital data. Contact these agencies or NOAA for more information concerning this database. See also the FISHL (Fish Lines) data layer, part of the larger Columbia River ESI database, for additional fish information. These data do not necessarily represent all fish occurrences in Columbia River. The following species are included in this data set: (Species_ID, Common Name, Scientific Name, if applicable): 12, Starry flounder, Platichthys stellatus; 43, White sturgeon, Acipenser transmontanus; 44, Green sturgeon, Acipenser medirostris; 45, Coastal Cutthroat trout, Oncorhynchus clarkii clarkia; 69, Coho salmon, Oncorhynchus kisutch; 71, Sockeye salmon, Oncorhynchus nerka; 72, Chum salmon, Oncorhynchus keta; 77, Eulachon, Thaleichthys pacificus; 83, Salmon; 87, American shad, Alosa sapidissima; 162, Common carp, Cyprinus carpio; 180, Smallmouth bass, Micropterus dolomieu; 188, Walleye, Stizostedion vitreum vitreum; 202, White crappie, Pomoxis annularis; 219, Pacific lamprey, Lampetra tridentate; 490, Chinook salmon (fall), Oncorhynchus tshawytscha (fall); 493, Chinook salmon (spring), Oncorhynchus tshawytscha (spring); 962, Rainbow trout (summer), Oncorhynchus mykiss (summer); 963, Rainbow trout (winter), Oncorhynchus mykiss (winter); 964, Bull trout, Salvelinus confluentus; 965, Chinook salmon (summer), Oncorhynchus tshawytscha (summer).
A multi-stage error checking process, described in the above Attribute_Accuracy_Report, is used to verify both attribute accuracy and logical consistency throughout data production. This process includes multiple automated logical consistency checks that test the files for missing or duplicate data, rules for proper coding, GIS topological consistencies (such as dangles, unnecessary nodes, etc.), and SQL SERVER(r) to ARC/INFO(r) consistencies. A final review is made by the GIS manager, where the data are written to CD-ROM and the metadata are written.After the data are delivered to NOAA, they are again subjected to a number of quality and consistency checks. In the process of checking for topological and database consistencies, new ID's and RARNUM's or HUNUM's are also generated. The new ID's are a combination of atlas number, element number, and record number. In addition, the value used to represent the element is modified to reflect the type of feature being mapped. In the case of an element that is normally represented by a point or polygon, a value of 20 is added to the standard element value for mapping of linear features. In the case where an element usually mapped as a polygon is represented by a point, a value of 30 is added to the regular element value. The RARNUM's are also modified to include the atlas number, so multiple atlases can be combined and RARNUM's remain unique. RARNUM's are redefined on an element basis, so "resources at risk" groupings will contain only a single element. HUNUM's are also modified to include the atlas number.
Anadromous Fish Data for Washington and Oregon
Stone, S., National Oceanic and Atmospheric Administration (NOAA)
2004-02-01
Discrete
2004-02
Anadromous fish distributions | Source Geospatial Form: Expert knowledge | Type of Source Media: Personal communication
Distribution and Abundance of Fishes and Invertebrates in West Coast Estuaries, ELMR Report No. 4
Monaco, M., et al., National Oceanic and Atmospheric Administration
1990-01-01
Discrete
1990
Seasonality information for fish | Source Geospatial Form: Hardcopy text | Type of Source Media: paper
Distribution of Fish, Birds, Plants, and Mammals in the Columbia River
Clark, A., U.S. Fish and Wildlife Service (USFWS)
2004-02-01
Discrete
2004-02
Distribution and seasonality information for fish | Source Geospatial Form: Expert Knowledge | Type of Source Media: Personal communication
Distribution of Fish, Birds, and Mammals along the Columbia River
Van Der Naald, W., Oregon Department of Fish and Wildlife (ODFW)
2004-02-01
Discrete
2004-02
Distribution and seasonality information for fish | Source Geospatial Form: Expert knowledge | Type of Source Media: Personal communication
Distribution of Wildlife along the Columbia River
Rien, T., Oregon Department of Fish and Wildlife (ODFW)
2004-02-01
Discrete
2004-02
Distribution and seasonality information for fish | Source Geospatial Form: Expert knowledge | Type of Source Media: Personal communication
Distribution of Wildlife on Sauvie Island and Surrounding Areas
Nebeker, M., Oregon Department of Fish and Wildlife (ODFW)
2004-02-01
Discrete
2004-02
Distribution information of fish on Sauvie Island and surrounding areas | Source Geospatial Form: Expert Knowledge | Type of Source Media: Personal communication
Distribution of Wildlife on the Lower Columbia River
Anderson, E., U.S. Fish and Wildlife Service (USFWS)
2004-01-01
Discrete
2004-01
Distribution information for fish | Source Geospatial Form: Expert Knowledge | Type of Source Media: Personal communication
Fish Distribution in the Columbia River
Pribyl, S., Oregon Department of Fish and Wildlife (ODFW)
2004-01-01
Discrete
2004-01
Distribution and seasonality information for fish | Source Geospatial Form: Expert knowledge | Type of Source Media: Personal communication
Fish, Bird, Mammal, and Plant Distributions in the Lower Columbia River
Meyer, B., National Oceanic and Atmospheric Administration (NOAA)
2004-02-01
Discrete
2004-02
Distribution and seasonality information for fish | Source Geospatial Form: Expert Knowledge | Type of Source Media: Personal communication
Fish, Bird, and Mammal Distributions along the Columbia River
North, J., Oregon Department of Fish and Wildlife (ODFW)
2004-02-01
Discrete
2004-02
Distribution and seasonality information for fish | Source Geospatial Form: Expert knowledge | Type of Source Media: Personal communication
Hoquiam Washington-Oregon, Pacific Coast Ecological Inventory
U.S. Fish and Wildlife Service (USFWS)
1981-01-01
Discrete
1981
250000
Distribution information for fish | Source Geospatial Form: Hardcopy Map | Type of Source Media: paper
Oil Spill Protection Plan for the Natural Resources of the Lower Columbia River
Sutherland, B., Oregon Department of Environmental Quality (ODEQ)
1979-01-01
Discrete
1979
Distribution information for fish | Source Geospatial Form: Hardcopy Map | Type of Source Media: paper
Recovery/Subbasin Plan Technical Document
Guy, D., Lower Columbia Fish Recovery Board
2003-01-01
Discrete
2003
Seasonality information for fish | Source Geospatial Form: Hardcopy text | Type of Source Media: CD-ROM
Salmon Information for the Lower Columbia River
Washington Department of Fish and Wildlife
2004-01-01
Discrete
2004-02
Seasonality information for Sockeye salmon | Source Geospatial Form: Hardcopy text | Type of Source Media: online
The Columbia River Estuary Atlas of Physical and Biological Characteristics
Columbia River Estuary Data Development Program
1984-01-01
Discrete
1984
250000
Seasonality information for fish | Source Geospatial Form: Hardcopy atlas | Type of Source Media: paper
1
Three main sources of data were used to depict fish distribution and seasonality for this data layer: (1) personal interviews with resource experts from the Oregon Department of Fish and Wildlife (ODFW) and the U.S. Fish and Wildlife Service (USFWS); (2) the 2003 Draft Lower Columbia Fish Recovery Board Recovery/Subbasin Plan, Technical Foundation; and (3) NOAA synthesized digital ODFW and WDFW anadromous fish arc coverages. Note that these arcs were adapted from the original ODFW and WDFW data. Information gathered during initial interviews and from hardcopy sources was compiled onto U.S. Geological Survey 1:24,000 topographic quadrangles.The compiled data were digitized off of the base maps into an ArcInfo system to create the FISH data layer. All ESI, biology, and human-use data were plotted onto hardcopy draft maps. Following the delivery of draft maps to the participating resource experts, a second set of interviews was conducted to review the maps. Edits to the FISH data layer were made based on the recommendations of the resource experts, and final hardcopy maps were created.
2004-08-01T00:00:00
42611
Entity
BIORES
42610
Entity
BIO_LUT
42614
Entity
BREED
42609
Entity
FISH.PAT
42617
Entity
RUNS_DAT
42613
Entity
SEASONAL
42615
Entity
SOURCES
42612
Entity
SPECIES
42616
Entity
STATUS
gov.noaa.nmfs.inport:40259
Tyler Christensen
2017-04-05T14:50:44
SysAdmin InPortAdmin
2023-05-30T18:09:24
2018-02-08
Office of Response and Restoration
ORR
1002
Public
No
2018-02-08
1 Year
2019-02-08