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Item Identification

Title: NPRB1019_Fish_Histopath2
Short Name: NPRB1019_Fish_Histopath2
Status: Completed
Abstract:

tab in NPRB-1019_Data Excel spreadsheet; represents fish sampling data | Description Source: Author

Notes:

Converted from FGDC using 'fgdc_to_inport_xml_entity.pl' script.

Data Attributes

Attribute Summary

Rubric Score Primary Key? Name Type Description
100
Collection Date NUMBER Collection Date | Description Source: Author
100
Site VARCHAR Sampling site | Description Source: Author
100
Site Code VARCHAR Unique site Code | Description Source: Author
100
LatDeg NUMBER Latitude of a sampling site | Description Source: Author
100
LonDeg NUMBER Longitude of sampling site | Description Source: Author
100
Species VARCHAR Species of fish | Description Source: Author
100
Sex VARCHAR Sex of a specie | Description Source: Author
100
Number of fish analyzed Unknown Number of fish analyzed | Description Source: Author
100
Fish Length mm NUMBER Fish Length mm | Description Source: Author
100
Weight in Grams NUMBER Weight in Grams | Description Source: Author
100
Time Necropsis NUMBER Time Necropsis | Description Source: Author
100
Gross Lesions VARCHAR abnormalities noted by visual examination at gross necropsy in the external or internal appearance | Description Source: Author
100
Tissue type VARCHAR Fish tissue analyzed | Description Source: Author
100
Parameter VARCHAR Histopathology parameter (parasite, disease) measured | Description Source: Author
100
Data VARCHAR Presence or non-occurrence of histopathology parameters | Description Source: Author

Attribute Details

Collection Date

CC ID: 528931
Seq. Order: 1
Data Storage Type: NUMBER
Required: No
Primary Key: No
Status: Active
Description:

Collection Date | Description Source: Author

Allowed Values: 7/19/10 - 7/21/10

Site

CC ID: 528932
Seq. Order: 2
Data Storage Type: VARCHAR
Required: No
Primary Key: No
Status: Active
Description:

Sampling site | Description Source: Author

Allowed Values: Nanwalek: Nanwalek | Port Graham: Port Graham | Seldovia: Seldovia |

Site Code

CC ID: 528933
Seq. Order: 3
Data Storage Type: VARCHAR
Required: No
Primary Key: No
Status: Active
Description:

Unique site Code | Description Source: Author

Allowed Values: NHA: Nanwalek | PHGA: Port Graham | SHA: Seldovia |

LatDeg

CC ID: 528934
Seq. Order: 4
Data Storage Type: NUMBER
Required: No
Primary Key: No
Status: Active
Description:

Latitude of a sampling site | Description Source: Author

Allowed Values: 59.351492 - 59.4532

LonDeg

CC ID: 528935
Seq. Order: 5
Data Storage Type: NUMBER
Required: No
Primary Key: No
Status: Active
Description:

Longitude of sampling site | Description Source: Author

Allowed Values: -151.92089 - -151.5209

Species

CC ID: 528936
Seq. Order: 6
Data Storage Type: VARCHAR
Required: No
Primary Key: No
Status: Active
Description:

Species of fish | Description Source: Author

Allowed Values: sockeye: sockeye | chum: chum |

Sex

CC ID: 528937
Seq. Order: 7
Data Storage Type: VARCHAR
Required: No
Primary Key: No
Status: Active
Description:

Sex of a specie | Description Source: Author

Allowed Values: male: male | female: female |

Number of fish analyzed

CC ID: 528938
Seq. Order: 8
Data Storage Type: Unknown
Required: No
Primary Key: No
Status: Active
Description:

Number of fish analyzed | Description Source: Author

Allowed Values: Comments of a sampler

Fish Length mm

CC ID: 528939
Seq. Order: 9
Data Storage Type: NUMBER
Required: No
Primary Key: No
Status: Active
Description:

Fish Length mm | Description Source: Author

Allowed Values: 495 - 695

Weight in Grams

CC ID: 528940
Seq. Order: 10
Data Storage Type: NUMBER
Required: No
Primary Key: No
Status: Active
Description:

Weight in Grams | Description Source: Author

Allowed Values: 1320 - 4510

Time Necropsis

CC ID: 528941
Seq. Order: 11
Data Storage Type: NUMBER
Required: No
Primary Key: No
Status: Active
Description:

Time Necropsis | Description Source: Author

Allowed Values: 12:16 AM - 11:45 PM

Gross Lesions

CC ID: 528942
Seq. Order: 12
Data Storage Type: VARCHAR
Required: No
Primary Key: No
Status: Active
Description:

abnormalities noted by visual examination at gross necropsy in the external or internal appearance | Description Source: Author

Allowed Values: no adipose fin clip: Indication of wild fish | paler flesh, small fish: relatively smaller flesh that was pale pink in color | num. peritoneal: numerous peritoneal nematodes | many perit. nematodes: many nematode worms |

Tissue type

CC ID: 528943
Seq. Order: 13
Data Storage Type: VARCHAR
Required: No
Primary Key: No
Status: Active
Description:

Fish tissue analyzed | Description Source: Author

Allowed Values: Gill: Fish gill | Kidney: Fish kidney | Liver: Fish liver |

Parameter

CC ID: 528944
Seq. Order: 14
Data Storage Type: VARCHAR
Required: No
Primary Key: No
Status: Active
Description:

Histopathology parameter (parasite, disease) measured | Description Source: Author

Allowed Values: Gill Loma salmonis (microsporidan): Gill Loma salmonis (microsporidan) | Gill Microaneurysms: Gill Microaneurysms | Gill monogenetic trematodes: Gill monogenetic trematodes | Gill no significant lesions: no significant lesions in the gill | Kidney tubular Myxosporidans: Kidney tubular Myxosporidans | Kidney no significant lesions: No significant lesions in the kidney | Liver no significant lesions: No significant lesions in the liver | Liver Peritoneal Nematodes: Liver Peritoneal Nematodes |

Data

CC ID: 528945
Seq. Order: 15
Data Storage Type: VARCHAR
Required: No
Primary Key: No
Status: Active
Description:

Presence or non-occurrence of histopathology parameters | Description Source: Author

Allowed Values: 1: Parameter observed positively | 0: Parameter observed |

Catalog Details

Catalog Item ID: 40991
GUID: gov.noaa.nmfs.inport:40991
Metadata Record Created By: Tyler Christensen
Metadata Record Created: 2017-04-06 10:31+0000
Metadata Record Last Modified By: SysAdmin InPortAdmin
Metadata Record Last Modified: 2022-08-09 17:11+0000
Metadata Record Published: 2017-04-07
Owner Org: NCCOS
Metadata Publication Status: Published Externally
Do Not Publish?: N
Metadata Last Review Date: 2017-04-07
Metadata Review Frequency: 1 Year
Metadata Next Review Date: 2018-04-07