59918
Sablefish Sex Differentiation Sample Data
Sablefish Sex Differentiation Sample Data
Entity
Published / External
17986
Sex control experiments - Development of methods to sterilize sablefish
Data Set
Planned
This table contains fish metrics and gonadal gene expression data for juvenile sablefish sampled during the process of sex differentiation.
Spreadsheet
Yes
PARR
This table contains fish metrics and gonadal gene expression data for juvenile sablefish sampled during the process of sex differentiation.
1
Sample number
number
No
No
Active
Identifier for sample. Units for values are NA.
number
NA
2
Sampling date
text
No
No
Active
Date fish sampled. Units for values are month-day-year.
text
month-day-year
3
Cohort year
number
No
No
Active
Year sampled fish were spawned. Units for values are NA.
number
NA
4
Genotypic sex
text
No
No
Active
Genotypic sex determined for the fish: M, male; F, female. Units for values are NA.
text
NA
5
Bin Length
number
No
No
Active
Fork length bins used for graphing. Units for values are NA.
number
NA
6
Fork length
number
No
No
Active
Fish fork length recorded at sampling. Units for values are millimeters.
number
millimeters
7
Body weight
number
No
No
Active
Fish body weight recorded at sampling. Units for values are grams.
number
grams
8
Tissue
text
No
No
Active
Sampling tissue method:trunk or gonads only. Units for values are NA.
text
NA
9
eef1a_Ct
number
No
No
Active
Candidate reference gene expression qPCR cycle threshold value. Units for values are NA.
number
NA
10
eef1a_RQ
number
No
No
Active
Candidate reference gene expression qPCR relative quantity. Units for values are NA.
number
NA
11
actb_Ct
number
No
No
Active
Candidate reference gene expression qPCR cycle threshold value. Units for values are NA.
number
NA
12
actb_RQ
number
No
No
Active
Candidate reference gene expression qPCR relative quantity. Units for values are NA.
number
NA
13
btf3_Ct
number
No
No
Active
Candidate reference gene expression qPCR cycle threshold value. Units for values are NA.
number
NA
14
btf3_RQ
number
No
No
Active
Candidate reference gene expression qPCR relative quantity. Units for values are NA.
number
NA
15
rpl4_Ct
number
No
No
Active
Candidate reference gene expression qPCR cycle threshold value. Units for values are NA.
number
NA
16
rpl4_RQ
number
No
No
Active
Candidate reference gene expression qPCR relative quantity. Units for values are NA.
number
NA
17
cytb_Ct
number
No
No
Active
Candidate reference gene expression qPCR cycle threshold value. Units for values are NA.
number
NA
18
cytb_RQ
number
No
No
Active
Candidate reference gene expression qPCR relative quantity. Units for values are NA.
number
NA
19
Refrence Gene Geometric Mean
number
No
No
Active
Geometric mean of the three most stable reference genes (actb, btf3, rpl4) used for gene normalization of target genes (RefGeoMean). Units for values are NA.
number
NA
20
dmrt1_Ct
number
No
No
Active
Target gene expression qPCR cycle threshold value. Units for values are NA.
number
NA
21
dmrt1_RQ
number
No
No
Active
Target gene expression qPCR relative quantity. Units for values are NA.
number
NA
22
dmrt1_Ref
number
No
No
Active
Target gene expression qPCR relative quantity normalized to RefGeoMean. Units for values are NA.
number
NA
23
dmrt1_Norm
number
No
No
Active
Target gene expression qPCR relative quantity normalized to RefGeoMean and tissue type. Units for values are NA.
number
NA
24
cyp19a1a_Ct
number
No
No
Active
Target gene expression qPCR cycle threshold value. Units for values are NA.
number
NA
25
cyp19a1a_RQ
number
No
No
Active
Target gene expression qPCR relative quantity. Units for values are NA.
number
NA
26
cyp19a1a_Ref
number
No
No
Active
Target gene expression qPCR relative quantity normalized to RefGeoMean. Units for values are NA.
number
NA
27
cyp19a1a_Norm
number
No
No
Active
Target gene expression qPCR relative quantity normalized to RefGeoMean and tissue type. Units for values are NA.
number
NA
28
amh_Ct
number
No
No
Active
Target gene expression qPCR cycle threshold value. Units for values are NA.
number
NA
29
amh_RQ
number
No
No
Active
Target gene expression qPCR relative quantity. Units for values are NA.
number
NA
30
amh_Ref
number
No
No
Active
Target gene expression qPCR relative quantity normalized to RefGeoMean. Units for values are NA.
number
NA
31
amh_Norm
number
No
No
Active
Target gene expression qPCR relative quantity normalized to RefGeoMean and tissue type. Units for values are NA.
number
NA
32
hsd3b1_Ct
number
No
No
Active
Target gene expression qPCR cycle threshold value. Units for values are NA.
number
NA
33
hsd3b1_RQ
number
No
No
Active
Target gene expression qPCR relative quantity. Units for values are NA.
number
NA
34
hsd3b1_Ref
number
No
No
Active
Target gene expression qPCR relative quantity normalized to RefGeoMean. Units for values are NA.
number
NA
35
hsd3b1_Norm
number
No
No
Active
Target gene expression qPCR relative quantity normalized to RefGeoMean and tissue type. Units for values are NA.
number
NA
36
cyp11b_Ct
number
No
No
Active
Target gene expression qPCR cycle threshold value. Units for values are NA.
number
NA
37
cyp11b_RQ
number
No
No
Active
Target gene expression qPCR relative quantity. Units for values are NA.
number
NA
38
cyp11b_Ref
number
No
No
Active
Target gene expression qPCR relative quantity normalized to RefGeoMean. Units for values are NA.
number
NA
39
cyp11b_Norm
number
No
No
Active
Target gene expression qPCR relative quantity normalized to RefGeoMean and tissue type. Units for values are NA.
number
NA
40
fshr_Ct
number
No
No
Active
Target gene expression qPCR cycle threshold value. Units for values are NA.
number
NA
41
fshr_RQ
number
No
No
Active
Target gene expression qPCR relative quantity. Units for values are NA.
number
NA
42
fshr_Ref
number
No
No
Active
Target gene expression qPCR relative quantity normalized to RefGeoMean. Units for values are NA.
number
NA
43
fshr_Norm
number
No
No
Active
Target gene expression qPCR relative quantity normalized to RefGeoMean and tissue type. Units for values are NA.
number
NA
44
foxl2_Ct
number
No
No
Active
Target gene expression qPCR cycle threshold value. Units for values are NA.
number
NA
45
foxl2_RQ
number
No
No
Active
Target gene expression qPCR relative quantity. Units for values are NA.
number
NA
46
foxl2_Ref
number
No
No
Active
Target gene expression qPCR relative quantity normalized to RefGeoMean. Units for values are NA.
number
NA
47
foxl2_Norm
number
No
No
Active
Target gene expression qPCR relative quantity normalized to RefGeoMean and tissue type. Units for values are NA.
number
NA
48
nr5a1_Ct
number
No
No
Active
Target gene expression qPCR cycle threshold value. Units for values are NA.
number
NA
49
nr5a1_RQ
number
No
No
Active
Target gene expression qPCR relative quantity. Units for values are NA.
number
NA
50
nr5a1_Ref
number
No
No
Active
Target gene expression qPCR relative quantity normalized to RefGeoMean. Units for values are NA.
number
NA
51
nr5a1_Norm
number
No
No
Active
Target gene expression qPCR relative quantity normalized to RefGeoMean and tissue type. Units for values are NA.
number
NA
52
amhrII_Ct
number
No
No
Active
Target gene expression qPCR cycle threshold value. Units for values are NA.
number
NA
53
amhrII_RQ
number
No
No
Active
Target gene expression qPCR relative quantity. Units for values are NA.
number
NA
54
amhrII_Ref
number
No
No
Active
Target gene expression qPCR relative quantity normalized to RefGeoMean. Units for values are NA.
number
NA
55
amhrII_Norm
number
No
No
Active
Target gene expression qPCR relative quantity normalized to RefGeoMean and tissue type. Units for values are NA.
number
NA
56
cyp11a1_Ct
number
No
No
Active
Target gene expression qPCR cycle threshold value. Units for values are NA.
number
NA
57
cyp11a1_RQ
number
No
No
Active
Target gene expression qPCR relative quantity. Units for values are NA.
number
NA
58
cyp11a1_Ref
number
No
No
Active
Target gene expression qPCR relative quantity normalized to RefGeoMean. Units for values are NA.
number
NA
59
cyp11a1_Norm
number
No
No
Active
Target gene expression qPCR relative quantity normalized to RefGeoMean and tissue type. Units for values are NA.
number
NA
60
gdf9_Ct
number
No
No
Active
Target gene expression qPCR cycle threshold value. Units for values are NA.
number
NA
61
gdf9_RQ
number
No
No
Active
Target gene expression qPCR relative quantity. Units for values are NA.
number
NA
62
gdf9_Ref
number
No
No
Active
Target gene expression qPCR relative quantity normalized to RefGeoMean. Units for values are NA.
number
NA
63
gdf9_Norm
number
No
No
Active
Target gene expression qPCR relative quantity normalized to RefGeoMean and tissue type. Units for values are NA.
number
NA
64
sox9a_Ct
number
No
No
Active
Target gene expression qPCR cycle threshold value. Units for values are NA.
number
NA
65
sox9a_RQ
number
No
No
Active
Target gene expression qPCR relative quantity. Units for values are NA.
number
NA
66
sox9a_Ref
number
No
No
Active
Target gene expression qPCR relative quantity normalized to RefGeoMean. Units for values are NA.
number
NA
67
sox9a_Norm
number
No
No
Active
Target gene expression qPCR relative quantity normalized to RefGeoMean and tissue type. Units for values are NA.
number
NA
68
star_Ct
number
No
No
Active
Target gene expression qPCR cycle threshold value. Units for values are NA.
number
NA
69
star_RQ
number
No
No
Active
Target gene expression qPCR relative quantity. Units for values are NA.
number
NA
70
star_Ref
number
No
No
Active
Target gene expression qPCR relative quantity normalized to RefGeoMean. Units for values are NA.
number
NA
71
star_Norm
number
No
No
Active
Target gene expression qPCR relative quantity normalized to RefGeoMean and tissue type. Units for values are NA.
number
NA
72
inha_Ct
number
No
No
Active
Target gene expression qPCR cycle threshold value. Units for values are NA.
number
NA
73
inha_RQ
number
No
No
Active
Target gene expression qPCR relative quantity. Units for values are NA.
number
NA
74
inha_Ref
number
No
No
Active
Target gene expression qPCR relative quantity normalized to RefGeoMean. Units for values are NA.
number
NA
75
inha_Norm
number
No
No
Active
Target gene expression qPCR relative quantity normalized to RefGeoMean and tissue type. Units for values are NA.
number
NA
76
cyp17a2_Ct
number
No
No
Active
Target gene expression qPCR cycle threshold value. Units for values are NA.
number
NA
77
cyp17a2_RQ
number
No
No
Active
Target gene expression qPCR relative quantity. Units for values are NA.
number
NA
78
cyp17a2_Ref
number
No
No
Active
Target gene expression qPCR relative quantity normalized to RefGeoMean. Units for values are NA.
number
NA
79
cyp17a2_Norm
number
No
No
Active
Target gene expression qPCR relative quantity normalized to RefGeoMean and tissue type. Units for values are NA.
number
NA
80
gsdf_Ct
number
No
No
Active
Target gene expression qPCR cycle threshold value. Units for values are NA.
number
NA
81
gsdf_RQ
number
No
No
Active
Target gene expression qPCR relative quantity. Units for values are NA.
number
NA
82
gsdf_Ref
number
No
No
Active
Target gene expression qPCR relative quantity normalized to RefGeoMean. Units for values are NA.
number
NA
83
gsdf_Norm
number
No
No
Active
Target gene expression qPCR relative quantity normalized to RefGeoMean and tissue type. Units for values are NA.
number
NA
84
nr0b1_Ct
number
No
No
Active
Target gene expression qPCR cycle threshold value. Units for values are NA.
number
NA
85
nr0b1_RQ
number
No
No
Active
Target gene expression qPCR relative quantity. Units for values are NA.
number
NA
86
nr0b1_Ref
number
No
No
Active
Target gene expression qPCR relative quantity normalized to RefGeoMean. Units for values are NA.
number
NA
87
nr0b1_Norm
number
No
No
Active
Target gene expression qPCR relative quantity normalized to RefGeoMean and tissue type. Units for values are NA.
number
NA
88
vasa_Ct
number
No
No
Active
Target gene expression qPCR cycle threshold value. Units for values are NA.
number
NA
89
vasa_RQ
number
No
No
Active
Target gene expression qPCR relative quantity. Units for values are NA.
number
NA
90
vasa_Ref
number
No
No
Active
Target gene expression qPCR relative quantity normalized to RefGeoMean. Units for values are NA.
number
NA
91
vasa_Norm
number
No
No
Active
Target gene expression qPCR relative quantity normalized to RefGeoMean and tissue type. Units for values are NA.
number
NA
92
zp3_Ct
number
No
No
Active
Target gene expression qPCR cycle threshold value. Units for values are NA.
number
NA
93
zp3_RQ
number
No
No
Active
Target gene expression qPCR relative quantity. Units for values are NA.
number
NA
94
zp3_Ref
number
No
No
Active
Target gene expression qPCR relative quantity normalized to RefGeoMean. Units for values are NA.
number
NA
95
zp3_Norm
number
No
No
Active
Target gene expression qPCR relative quantity normalized to RefGeoMean and tissue type. Units for values are NA.
number
NA
96
figla_Ct
number
No
No
Active
Target gene expression qPCR cycle threshold value. Units for values are NA.
number
NA
97
figla_RQ
number
No
No
Active
Target gene expression qPCR relative quantity. Units for values are NA.
number
NA
98
figla_Ref
number
No
No
Active
Target gene expression qPCR relative quantity normalized to RefGeoMean. Units for values are NA.
number
NA
99
figla_Norm
number
No
No
Active
Target gene expression qPCR relative quantity normalized to RefGeoMean and tissue type. Units for values are NA.
number
NA
100
igf3_Ct
number
No
No
Active
Target gene expression qPCR cycle threshold value. Units for values are NA.
number
NA
101
igf3_RQ
number
No
No
Active
Target gene expression qPCR relative quantity. Units for values are NA.
number
NA
102
igf3_Ref
number
No
No
Active
Target gene expression qPCR relative quantity normalized to RefGeoMean. Units for values are NA.
number
NA
103
igf3_Norm
number
No
No
Active
Target gene expression qPCR relative quantity normalized to RefGeoMean and tissue type. Units for values are NA.
number
NA
104
fst_Ct
number
No
No
Active
Target gene expression qPCR cycle threshold value. Units for values are NA.
number
NA
105
fst_RQ
number
No
No
Active
Target gene expression qPCR relative quantity. Units for values are NA.
number
NA
106
fst_Ref
number
No
No
Active
Target gene expression qPCR relative quantity normalized to RefGeoMean. Units for values are NA.
number
NA
107
fst_Norm
number
No
No
Active
Target gene expression qPCR relative quantity normalized to RefGeoMean and tissue type. Units for values are NA.
number
NA
108
esr1_Ct
number
No
No
Active
Target gene expression qPCR cycle threshold value. Units for values are NA.
number
NA
109
esr1_RQ
number
No
No
Active
Target gene expression qPCR relative quantity. Units for values are NA.
number
NA
110
esr1_Ref
number
No
No
Active
Target gene expression qPCR relative quantity normalized to RefGeoMean. Units for values are NA.
number
NA
111
esr1_Norm
number
No
No
Active
Target gene expression qPCR relative quantity normalized to RefGeoMean and tissue type. Units for values are NA.
number
NA
112
ar1_Ct
number
No
No
Active
Target gene expression qPCR cycle threshold value. Units for values are NA.
number
NA
113
ar1_RQ
number
No
No
Active
Target gene expression qPCR relative quantity. Units for values are NA.
number
NA
114
ar1_Ref
number
No
No
Active
Target gene expression qPCR relative quantity normalized to RefGeoMean. Units for values are NA.
number
NA
115
ar1_Norm
number
No
No
Active
Target gene expression qPCR relative quantity normalized to RefGeoMean and tissue type. Units for values are NA.
number
NA
116
ar2_Ct
number
No
No
Active
Target gene expression qPCR cycle threshold value. Units for values are NA.
number
NA
117
ar2_RQ
number
No
No
Active
Target gene expression qPCR relative quantity. Units for values are NA.
number
NA
118
ar2_Ref
number
No
No
Active
Target gene expression qPCR relative quantity normalized to RefGeoMean. Units for values are NA.
number
NA
119
ar2_Norm
number
No
No
Active
Target gene expression qPCR relative quantity normalized to RefGeoMean and tissue type. Units for values are NA.
number
NA
120
pou5f3_Ct
number
No
No
Active
Target gene expression qPCR cycle threshold value. Units for values are NA.
number
NA
121
pou5f3_RQ
number
No
No
Active
Target gene expression qPCR relative quantity. Units for values are NA.
number
NA
122
pou5f3_Ref
number
No
No
Active
Target gene expression qPCR relative quantity normalized to RefGeoMean. Units for values are NA.
number
NA
123
pou5f3_Norm
number
No
No
Active
Target gene expression qPCR relative quantity normalized to RefGeoMean and tissue type. Units for values are NA.
number
NA
124
lhcgr_Ct
number
No
No
Active
Target gene expression qPCR cycle threshold value. Units for values are NA.
number
NA
125
lhcgr_RQ
number
No
No
Active
Target gene expression qPCR relative quantity. Units for values are NA.
number
NA
126
lhcgr_Ref
number
No
No
Active
Target gene expression qPCR relative quantity normalized to RefGeoMean. Units for values are NA.
number
NA
127
lhcgr_Norm
number
No
No
Active
Target gene expression qPCR relative quantity normalized to RefGeoMean and tissue type. Units for values are NA.
number
NA
gov.noaa.nmfs.inport:59918
Jeffrey Cowen
2020-06-02T13:54:04
SysAdmin InPortAdmin
2022-08-09T17:11:44
2020-06-02
Northwest Fisheries Science Center
NWFSC
2725 Montlake Boulevard East
Seattle
WA
98112
USA
206-860-3200
http://www.nwfsc.noaa.gov
1001
Public
No
2020-06-02
1 Year
2021-06-02