Quantification of epiphyte biomass accumulation on artificial seagrass leaves in Culebra, Puerto Rico
Data Set (DS) | Office for Coastal Management (OCM)GUID: gov.noaa.nmfs.inport:76340 | Updated: March 4, 2026 | Published / External
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Summary
Short Citation
Office for Coastal Management, 2026: Quantification of epiphyte biomass accumulation on artificial seagrass leaves in Culebra, Puerto Rico, https://www.fisheries.noaa.gov/inport/item/76340.
Full Citation Examples
DOI: https://doi.org/10.25921/a782-8g03
AbstractThis record provides estimates of epiphyte biomass accumulation on artificial seagrass leaves at 13 monitoring stations in Ensenada Honda and Puerto Manglar in the island of Culebra, Puerto Rico.
Currently the island of Culebra is implementing a ridge-to reef-monitoring to assess Land-based sources of pollution (LBSP) mitigation success and identifying adaptive management needs. The goal of this study was to test whether metrics of epiphyte load accumulation on seagrass leaves can be used as a biological response indicator for nutrient impacts on Culebra's nearshore habitats. More specifically identify the presence of spatial patterns and examine potential linkages with nearshore water quality conditions in locations where upland watershed restoration interventions have been implemented vs. locations where no interventions have been conducted.
Artificial seagrass installations were deployed at 13 nearshore fixed monitoring stations downstream from select coastal watershed drainage delivery points, and co-located with water quality, sediment trap, and seagrass monitoring stations. These sites were selected to represent: 1) Repeat locations where nearshore water quality and sedimentation are being monitored. 2) Repeat locations previously sampled in 2014 for water quality and seagrass community status assessment. Epiphyte accumulation was quantified on artificial seagrass following the methods outlined in Virnstein & Curran (1986) with slight modifications At each monitoring station three replicate shoots containing 6 blades each (2 each, approx. length: ~23cm, ~13cm, and ~8cm; approx. width: ~1cm) attached to plastic augers were deployed. Augers were inserted into the substrate and anchored to existing (previously installed) rebar markers. The experiment was run twice and installations remained underwater for 60âÃÂÃÂ90 days: 1) 7 Aug, 2023âÃÂÃÂ7 Nov, 2023; and 2) 11 Dec, 2023âÃÂÃÂ5 Feb, 2024. Recovered artificial leaves were carefully rinsed in fresh water to remove salt, gently scraped with a blade, and scraped material dried at 60 degrees celcius to constant weight. Artificial leaf dimensions were measured to the nearest 0.5 mm and the quadrangular (rectangle / trapezoid) leaf surface area was estimated accordingly. Recovered shoots that were frayed or tattered were discarded and excluded from analyses. Mean epiphyte biomass accumulation was computed in mg/cm2/day
The goal of this study was to test whether metrics of epiphyte load accumulation on seagrass leaves can be used as a biological response indicator for nutrient impacts on Culebra's nearshore habitats. More specifically identify the presence of spatial patterns and examine potential linkages with nearshore water quality conditions in locations where upland watershed restoration interventions have been implemented vs. locations where no interventions have been conducted.
Data Access & Downloads
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CSV - Comma Separated Values (Text)
Culebra epiphyte biomass accumulation on artificial seagrass-Datan (milligrams/centimeter square/day).
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CSV - Comma Separated Values (Text)
Data dictionary
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PNG - Portable Network Graphics Format, 9700
Image of epiphytometer, auger, and deployed epiphytometer
None
None
Controlled Theme Keywords
ANTHROPOGENIC/HUMAN INFLUENCED ECOSYSTEMS, AQUATIC ECOSYSTEMS, biota, COASTAL, COMMUNITY DYNAMICS, COMMUNITY STRUCTURE, EARTH SCIENCE, ECOLOGICAL DYNAMICS, environment, ESTUARIES, MACROALGAE (SEAWEEDS), MACROPHYTES, MARINE ENVIRONMENT MONITORING, oceans, PLANTS, REFORESTATION/REVEGETATION, SAV/SEA GRASS BED, SAV/SEA GRASS BED, VEGETATION, Water Oceans and Coasts Theme
Child Items
No Child Items for this record.
Contact Information
Metadata Contact
NOAA National Centers for Environmental Information (NCEI)
ROR: 04r0wrp59
ncei.info@noaa.gov
NCEI Contact Information
Extents
-65.30833333333° W,
-65.24444444444° E,
18.31388888889° N,
18.28861111111° S
Ensenada Honda and Puneto Manglar in Culebra Island, Puerto Rico
2023-08 - 2024-02
Item Identification
| Title: | Quantification of epiphyte biomass accumulation on artificial seagrass leaves in Culebra, Puerto Rico |
|---|---|
| Short Name: | Culebra, epiphyte biomass accumulation on artificial seagrass |
| Status: | Completed |
| Creation Date: | 2025 |
| Revision Date: | 2025 |
| Abstract: |
This record provides estimates of epiphyte biomass accumulation on artificial seagrass leaves at 13 monitoring stations in Ensenada Honda and Puerto Manglar in the island of Culebra, Puerto Rico. Currently the island of Culebra is implementing a ridge-to reef-monitoring to assess Land-based sources of pollution (LBSP) mitigation success and identifying adaptive management needs. The goal of this study was to test whether metrics of epiphyte load accumulation on seagrass leaves can be used as a biological response indicator for nutrient impacts on Culebra's nearshore habitats. More specifically identify the presence of spatial patterns and examine potential linkages with nearshore water quality conditions in locations where upland watershed restoration interventions have been implemented vs. locations where no interventions have been conducted. Artificial seagrass installations were deployed at 13 nearshore fixed monitoring stations downstream from select coastal watershed drainage delivery points, and co-located with water quality, sediment trap, and seagrass monitoring stations. These sites were selected to represent: 1) Repeat locations where nearshore water quality and sedimentation are being monitored. 2) Repeat locations previously sampled in 2014 for water quality and seagrass community status assessment. Epiphyte accumulation was quantified on artificial seagrass following the methods outlined in Virnstein & Curran (1986) with slight modifications At each monitoring station three replicate shoots containing 6 blades each (2 each, approx. length: ~23cm, ~13cm, and ~8cm; approx. width: ~1cm) attached to plastic augers were deployed. Augers were inserted into the substrate and anchored to existing (previously installed) rebar markers. The experiment was run twice and installations remained underwater for 60âÃÂÃÂ90 days: 1) 7 Aug, 2023âÃÂÃÂ7 Nov, 2023; and 2) 11 Dec, 2023âÃÂÃÂ5 Feb, 2024. Recovered artificial leaves were carefully rinsed in fresh water to remove salt, gently scraped with a blade, and scraped material dried at 60 degrees celcius to constant weight. Artificial leaf dimensions were measured to the nearest 0.5 mm and the quadrangular (rectangle / trapezoid) leaf surface area was estimated accordingly. Recovered shoots that were frayed or tattered were discarded and excluded from analyses. Mean epiphyte biomass accumulation was computed in mg/cm2/day |
| Purpose: |
The goal of this study was to test whether metrics of epiphyte load accumulation on seagrass leaves can be used as a biological response indicator for nutrient impacts on Culebra's nearshore habitats. More specifically identify the presence of spatial patterns and examine potential linkages with nearshore water quality conditions in locations where upland watershed restoration interventions have been implemented vs. locations where no interventions have been conducted. |
| Other Citation Details: |
-Virnstein RW, Curran MC (1986) Colonization of artificial seagrass versus time and distance from source> Mar. Ecol. Prog. Ser. 29:297-288 -Stoner A (1980) The role of seagrass biomass in the organization of benthic macrofaunal assemblages. Bull. Mar. Sci. 30: 537-551 -Frankovich T, Fourqurean J (1997) Seagrass epiphyte loads along a nutrient availability gradient, Florida Bay, USA. Mar. Ecol. Prog. Ser. 150: 37-50 -Nelson W (2017) Development of an epiphyte indicator of nutrient enrichment: a critical evaluation of observational and experimental studies. Ecol. Indic. 79: 207-227. doi:10.1016/j.ecolind.2017.04.034 |
| DOI (Digital Object Identifier): | https://doi.org/10.25921/a782-8g03 |
| DOI Registration Authority: | NOAA NCEI |
Keywords
Theme Keywords
| Thesaurus | Keyword |
|---|---|
| Global Change Master Directory (GCMD) Science Keywords |
EARTH SCIENCE
|
| Global Change Master Directory (GCMD) Science Keywords |
EARTH SCIENCE > BIOLOGICAL CLASSIFICATION > PLANTS
|
| Global Change Master Directory (GCMD) Science Keywords |
EARTH SCIENCE > BIOLOGICAL CLASSIFICATION > PLANTS > MACROALGAE (SEAWEEDS)
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| Global Change Master Directory (GCMD) Science Keywords |
EARTH SCIENCE > BIOSPHERE > ECOLOGICAL DYNAMICS
|
| Global Change Master Directory (GCMD) Science Keywords |
EARTH SCIENCE > BIOSPHERE > ECOLOGICAL DYNAMICS > COMMUNITY DYNAMICS
|
| Global Change Master Directory (GCMD) Science Keywords |
EARTH SCIENCE > BIOSPHERE > ECOLOGICAL DYNAMICS > COMMUNITY DYNAMICS > COMMUNITY STRUCTURE
|
| Global Change Master Directory (GCMD) Science Keywords |
EARTH SCIENCE > BIOSPHERE > ECOSYSTEMS > ANTHROPOGENIC/HUMAN INFLUENCED ECOSYSTEMS
|
| Global Change Master Directory (GCMD) Science Keywords |
EARTH SCIENCE > BIOSPHERE > ECOSYSTEMS > AQUATIC ECOSYSTEMS
|
| Global Change Master Directory (GCMD) Science Keywords |
EARTH SCIENCE > BIOSPHERE > ECOSYSTEMS > MARINE ECOSYSTEMS > COASTAL
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| Global Change Master Directory (GCMD) Science Keywords |
EARTH SCIENCE > BIOSPHERE > ECOSYSTEMS > MARINE ECOSYSTEMS > COASTAL > SAV/SEA GRASS BED
|
| Global Change Master Directory (GCMD) Science Keywords |
EARTH SCIENCE > BIOSPHERE > ECOSYSTEMS > MARINE ECOSYSTEMS > ESTUARY > SAV/SEA GRASS BED
|
| Global Change Master Directory (GCMD) Science Keywords |
EARTH SCIENCE > BIOSPHERE > VEGETATION
|
| Global Change Master Directory (GCMD) Science Keywords |
EARTH SCIENCE > BIOSPHERE > VEGETATION > MACROPHYTES
|
| Global Change Master Directory (GCMD) Science Keywords |
EARTH SCIENCE > HUMAN DIMENSIONS > HABITAT CONVERSION/FRAGMENTATION > REFORESTATION/REVEGETATION
|
| Global Change Master Directory (GCMD) Science Keywords |
EARTH SCIENCE > OCEANS > COASTAL PROCESSES > ESTUARIES
|
| Global Change Master Directory (GCMD) Science Keywords |
EARTH SCIENCE > OCEANS > MARINE ENVIRONMENT MONITORING
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| ISO 19115 Topic Category |
biota
|
| ISO 19115 Topic Category |
environment
|
| ISO 19115 Topic Category |
oceans
|
| NGDA Portfolio Themes |
Water Oceans and Coasts Theme
|
| UNCONTROLLED | |
| User-defined | Land-based sources of pollution |
| User-defined | NOAA Coral Reef Conservation Program |
| User-defined | NOAA Restoration Center |
| User-defined | Seagrass epiphytes |
| User-defined | Seagrasses |
Temporal Keywords
| Thesaurus | Keyword |
|---|---|
| Global Change Master Directory (GCMD) Temporal Data Resolution Keywords |
Decadal
|
Spatial Keywords
| Thesaurus | Keyword |
|---|---|
| Global Change Master Directory (GCMD) Location Keywords |
CONTINENT > NORTH AMERICA > CENTRAL AMERICA
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| Global Change Master Directory (GCMD) Location Keywords |
OCEAN > ATLANTIC OCEAN > NORTH ATLANTIC OCEAN > CARIBBEAN SEA > PUERTO RICO
|
| UNCONTROLLED | |
| User-defined | Culebra Island |
| User-defined | Ensenada Honda |
| User-defined | Nearshore |
| User-defined | Puerto Manglar |
Stratum Keywords
| Thesaurus | Keyword |
|---|---|
| Global Change Master Directory (GCMD) Vertical Data Resolution Keywords |
10 meters - < 30 meters
|
Instrument Keywords
| Thesaurus | Keyword |
|---|---|
| International Standard Statistical Classification of Fishing Gear (ISSCFG) |
MISCELLANEOUS Gear > Diving
|
| UNCONTROLLED | |
| User-defined | Biomass |
| User-defined | Quadrats |
| User-defined | Scuba |
Platform Keywords
| Thesaurus | Keyword |
|---|---|
| Global Change Master Directory (GCMD) Platform Keywords |
Data Analysis
|
| Global Change Master Directory (GCMD) Platform Keywords |
Data Collections
|
| Global Change Master Directory (GCMD) Platform Keywords |
ZODIACS
|
| UNCONTROLLED | |
| User-defined | Small boat |
Physical Location
| Organization: | National Centers for Environmental Information - Silver Spring, Maryland |
|---|---|
| City: | Silver Spring |
| State/Province: | MD |
Data Set Information
| Data Set Scope Code: | Data Set |
|---|---|
| Data Set Type: | CSV Files |
| Maintenance Frequency: | None Planned |
| Data Presentation Form: | Table (digital) |
| Entity Attribute Overview: |
Data include individual estimates of epiphyte biomass accumulation in milligrams per centimeter square per day. |
| Distribution Liability: |
While every effort has been made to ensure that these data are accurate and reliable within the limits of the current state of the art, NOAA cannot assume liability for any damages caused by errors or omissions in the data, nor as a result of the failure of the data to function on a particular system. NOAA makes no warranty, expressed or implied, nor does the fact of distribution constitute such a warranty. |
| Data Set Credit: | Bernardo Vargas-Angel, Juan Sanchez, Miguel Figuerola-Hernandez. |
Support Roles
Data Steward
| Date Effective From: | 2025 |
|---|---|
| Date Effective To: | 2035 |
| Contact (Person): | Vandiver, Lisa |
| Address: | |
| Email Address: | lisa.vandiver@noaa.gov |
Distributor
| Date Effective From: | 2025 |
|---|---|
| Date Effective To: | 2035 |
| Contact (Organization): | NOAA National Centers for Environmental Information (NCEI) |
| Address: | |
| ROR: | https://ror.org/04r0wrp59 |
| Email Address: | ncei.info@noaa.gov |
| URL: | NCEI Contact Information |
Metadata Contact
| Date Effective From: | 2025 |
|---|---|
| Date Effective To: | 2035 |
| Contact (Organization): | NOAA National Centers for Environmental Information (NCEI) |
| Address: | |
| ROR: | https://ror.org/04r0wrp59 |
| Email Address: | ncei.info@noaa.gov |
| URL: | NCEI Contact Information |
Extents
Extent Group 1
Extent Group 1 / Geographic Area 1
| W° Bound: | -65.30833333333 | |
|---|---|---|
| E° Bound: | -65.24444444444 | |
| N° Bound: | 18.31388888889 | |
| S° Bound: | 18.28861111111 | |
| Description |
Ensenada Honda and Puneto Manglar in Culebra Island, Puerto Rico |
|
Extent Group 1 / Time Frame 1
| Time Frame Type: | Range |
|---|---|
| Start: | 2023-08 |
| End: | 2024-02 |
Extent Group 2
Spatial Information
Spatial Resolution
| Horizontal Distance: | 0.5 Meter |
|---|---|
| Vertical Distance: | 0.5 Meter |
Reference Systems
Reference System 1
Coordinate Reference System |
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Access Information
| Data License: | CC0-1.0 |
|---|---|
| Data License URL: | https://creativecommons.org/publicdomain/zero/1.0/ |
| Data License Statement: | These data were produced by NOAA and are not subject to copyright protection in the United States. NOAA waives any potential copyright and related rights in these data worldwide through the Creative Commons Zero 1.0 Universal Public Domain Dedication (CC0-1.0). |
| Security Class: | Unclassified |
| Data Access Policy: |
We welcome the opportunity to collaborate on research issues contributing to the scientific basis for better management of marine ecosystems. The following recommendations are for your consideration as you use this data: 1) Data analyses should take all field exigencies into account. The most effective way to do this would be active collaboration with principal investigators. 2) In all presentations, product releases, or publications using these data proper acknowledgement the individuals responsible for data collection is expected. Citing the DOI (if available) is preferred, a non-DOI example is listed below. 3) If you collect or generate data for the same study areas, CREP requests that you share relevant information on complimentary data collections. |
| Data Access Procedure: |
Data can be accessed online via the NOAA National Centers for Environmental Information (NCEI) Ocean Archive. |
| Data Access Constraints: |
None |
| Data Use Constraints: |
None |
| Metadata Access Constraints: |
None |
| Metadata Use Constraints: |
None |
Distribution Information
Distribution 1
| Download URL: | https://www.ncei.noaa.gov/access/metadata/landing-page/bin/iso?id=gov.noaa.nodc:0306699 |
|---|---|
| Distributor: | NOAA National Centers for Environmental Information (NCEI) (2025 - 2035) |
| File Name: | Culebra epiphyte biomass accumulation on artificial seagrass |
| Description: |
Culebra epiphyte biomass accumulation on artificial seagrass-Datan (milligrams/centimeter square/day). |
| Distribution Format: | CSV - Comma Separated Values (Text) |
| Compression: | Uncompressed |
Distribution 2
| Download URL: | https://www.ncei.noaa.gov/archive/archive-management-system/OAS/bin/prd/jquery/accession/download/306699 |
|---|---|
| Distributor: | NOAA National Centers for Environmental Information (NCEI) (2025 - 2035) |
| File Name: | CulebraSeagrassEpiphyteAccumulationDataDictionary |
| Description: |
Data dictionary |
| Distribution Format: | CSV - Comma Separated Values (Text) |
| Compression: | Uncompressed |
Distribution 3
| Download URL: | https://www.ncei.noaa.gov/access/metadata/landing-page/bin/iso?id=gov.noaa.nodc:0306699 |
|---|---|
| Distributor: | NOAA National Centers for Environmental Information (NCEI) (2025 - 2035) |
| File Name: | Epiphytometer |
| Description: |
Image of epiphytometer, auger, and deployed epiphytometer |
| Distribution Format: | PNG - Portable Network Graphics Format |
| File Size: | 9700 |
| Compression: | Uncompressed |
Archive Information
306699
| Location: | NOAA National Centers for Environmental Information (NCEI) |
|---|---|
| File Identifier: | 306699 |
| File Name: | CulebraSeagrassEpiphyteAccumulationData |
| URL: | https://www.ncei.noaa.gov/archive/archive-management-system/OAS/bin/prd/jquery/accession/download/306699 |
| Description: |
Epiphyte biomass accumulation (mg/cm2/day) on artificial seagrass leaves. |
| Archive Date: | 2025-07-31 |
| Archive Update Frequency: | None Planned |
Data Quality
| Accuracy: |
Artificial seagrass installations deployment, retrieval, laboratory analyses, and accumulation rate computations were conducted by experienced scientific personnel who met a set of minimum standards for field and laboratory work. Handheld GPS units were used to locate sites and mark site locations. |
|---|---|
| Analytical Accuracy: |
Handheld GPS units were used to locate sites and mark site locations. |
| Completeness Measure: |
Data gaps originate from: 1) Lost experimental units; installations that were not found at time of recovery. 2) Experimental units that were shredded or tattered probably due to fish predation |
| Precision: |
-Artificial seagrass leaf length and width were measured to the nearest 0.5 mm and the quadrangular (rectangle / trapezoid) leaf area was estimated accordingly.
|
| Field Precision: |
Handheld GPS units were used to locate sites. |
| Conceptual Consistency: |
Survey methods were consistent across all sites. |
| Quality Control Procedures Employed: |
Quality control occurred at several major stages: 1) Experimental unit construction, deployment, recovery, and post-recovery handling. 2) Mathematical computation error checking. 3) Data entry, and 4) Data management. --Artificial seagrass installations construction, deployment, retrieval, laboratory analyses, and accumulation rate computations were conducted by experienced scientific personnel who met a set of minimum standards for field and laboratory work. --The same laboratory instrumentation (i.e., analytical balance and drying oven) was employed to process and analyze all samples. --Data gaps originate from experimental units that were not found at time of recovery, and experimental units that were frayed or tattered at time of recovery, probably due to predation. --Survey and analytical methods were consistent across all samples. |
Lineage
| Lineage Statement: |
Epiphyte biomass accumulation on artificial seagrass |
|---|
Sources
Culebra Seagrass Monitoring Work Plan: Developing a seagrass monitoring program to evaluate changes in LBSP responses in Culebra, Puerto Rico
| Contact Role Type: | Publisher |
|---|---|
| Contact Type: | Organization |
| Contact Name: | NOAA Coral Reef Information System |
| Publish Date: | 2024-01-01 |
| Citation URL: | https://www.ncei.noaa.gov/data/oceans/coris/library/NOAA/CRCP/NMFS/OHC/Projects/30033/Culebra_LBSP_RidgeToReef_Monitoring_Program/Vargas-Angel2024e_Seagrass_Monitoring_Transects_WorkPlan.pdf |
| Citation URL Name: | Vargas-Angel2024e_Seagrass_Monitoring_Workplan |
| Citation URL Description: |
Culebra Seagrass Monitoring Work Plan |
| Source Contribution: |
NOAA Coral Reef Information System: The Coral Program Watershed Management Activities; Puerto Rico, Culebra |
Virnstein RW, Curran MC (1986) Colonization of artificial seagrass versus time and distance from source. Mar. Ecol. Prog. Ser. 29:297-288
| Contact Role Type: | Publisher |
|---|---|
| Contact Type: | Organization |
| Contact Name: | Mar. Ecol. Prog. Ser |
| Publish Date: | 1986-01-01 |
| Extent Type: | Range |
| Extent Start Date/Time: | 2023 |
| Extent End Date/Time: | 2024 |
Acquisition Information
Instruments
| Instrument Unavailable Reason: | Not Applicable |
|---|
Related Items
| Item Type | Relationship Type | Title |
|---|---|---|
| Data Set (DS) | Cross Reference |
Benthic Surveys in Culebra, Puerto Rico: comprehensive assessment of seagrass community structure and demography from transect surveys conducted in 2014 and 2022 Benthic Surveys in Culebra, Puerto Rico: comprehensive assessment of seagrass community structure and demography from transect surveys conducted in 2014 and 2022 |
| Data Set (DS) | Cross Reference |
Water quality surveys in Culebra: comprehensive assessment of inorganic nutrient and human dietary tracer concentrations 2023-05-03 to 2024-05-21 |
| Data Set (DS) | Cross Reference |
Water quality surveys in Culebra: comprehensive assessment of physical and chemical water characteristics 2023-02-08 to 2025-01-13 Water quality surveys in Culebra: comprehensive assessment of inorganic nutrient concentrations 2023-05-03 to 2024-05-21 |
Catalog Details
| Catalog Item ID: | 76340 |
|---|---|
| GUID: | gov.noaa.nmfs.inport:76340 |
| Metadata Record Created By: | Bernardo Vargas-Angel |
| Metadata Record Created: | 2025-07-14 13:06+0000 |
| Metadata Record Last Modified By: | SysAdmin InPortAdmin |
| Metadata Record Last Modified: | 2026-03-04 19:17+0000 |
| Metadata Record Published: | 2025-08-07 |
| Owner Org: | OCM |
| Metadata Publication Status: | Published Externally |
| Do Not Publish?: | N |
| Metadata Last Review Date: | 2025-06-24 |
| Metadata Review Frequency: | 1 Year |
| Metadata Next Review Date: | 2026-06-24 |
