Data Management Plan (Deprecated) | ID: 78501 | Habitat Heartbeats: Incorporating Bivalve Biosensors into Estuary Monitoring Infrastructure

This is a deprecated version of the NOAA Data Management Plan template.
InPort now supports a dedicated Data Management Plan Catalog Item type, which is up-to-date with the latest NOAA DMP template. The ability to generate Data Management Plans from Data Sets will be discontinued in a future release. For more information, consult the help guides on the new Data Management Plan as well as how to convert this Legacy DMP to the new format.

Data Management Plan

DMP Template v2.0.1 (2015-01-01)

Please provide the following information, and submit to the NOAA DM Plan Repository.

Reference to Master DM Plan (if applicable)

As stated in Section IV, Requirement 1.3, DM Plans may be hierarchical. If this DM Plan inherits provisions from a higher-level DM Plan already submitted to the Repository, then this more-specific Plan only needs to provide information that differs from what was provided in the Master DM Plan.

URL of higher-level DM Plan (if any) as submitted to DM Plan Repository:

Always left blank

1. General Description of Data to be Managed

1.1. Name of the Data, data collection Project, or data-producing Program:

Habitat Heartbeats: Incorporating Bivalve Biosensors into Estuary Monitoring Infrastructure - NERRS/NSC(NERRS Science Collaborative)

Taken From: Item Identification | Title

1.2. Summary description of the data:

This project developed a shellfish biosensor monitoring system to complement existing long-term water quality monitoring and provide real-time feedback on estuary conditions.

The Project

Southern California’s estuaries can experience large swings in water quality due to events like freshwater inflow, sewage spills, and estuary mouth closures. The Tijuana River NERR (TRNERR) monitors several estuaries in San Diego County to better understand how biological communities respond to changes in water quality. While this biological monitoring produces detailed, high-quality data, the labor associated with this monitoring is significant and imposes limits on the frequency of monitoring. Regional partners, including the TRNERR and California State Parks among other intended users, expressed a need for improved monitoring techniques to detect when water quality conditions threaten the biotic community. Automated monitoring of biological communities could provide real-time feedback about biological response to changes in water quality while reducing the frequency of in-person monitoring.

Through an iterative process with TRNERR and other users, this project team co-developed a biosensor monitoring system that uses shellfish (oysters and mussels) as biosentinels. Alongside state and local land managers and other wetland and aquaculture professionals, the team designed an open-source electronic sensor that attaches to shellfish and monitors gaping behavior and heart rate. These metrics that can be used as indicators of physiological stress in response to environmental changes. The team deployed shellfish outfitted with these sensors in three field locations in San Diego. The deployed shellfish provided a real-time data stream of gaping behavior and heart rate, associated with a variety of changing water quality conditions, including frequent salinity and oxygen fluctuations in Tijuana River Estuary and mouth closure events in Los Penasquitos Lagoon. Periods of low salinity associated with rainfall or possible sewage outflows in Tijuana River were accompanied by group closures of shells and lower heart rates, and similar patterns were observed for periods when dissolved oxygen was now.

The project demonstrated the successful design and deployment of a low-cost, long-duration biosensor system. Ongoing refinement of this open-source hardware and software will help enhance monitoring capacity in Southern California and beyond, allowing for targeted deployments of biosentinels in the short term as well as their incorporation into routine long-term monitoring. The real time data stream provided by biosentinels will help managers adapt to changing conditions and inform locally relevant decision making for events that pose significant threats to wildlife and habitat like estuary mouth closure and sewage spills. The biosensor system also holds potential value to other coastal areas and sectors, for example, long-term biosentinel performance data can inform siting for aquaculture or living shoreline projects.

Taken From: Item Identification | Abstract
Notes: Only a maximum of 4000 characters will be included.

1.3. Is this a one-time data collection, or an ongoing series of measurements?

One-time data collection

Taken From: Extents / Time Frames | Time Frame Type
Notes: Data collection is considered ongoing if a time frame of type "Continuous" exists.

1.4. Actual or planned temporal coverage of the data:

2021-10 to 2024-09

Taken From: Extents | Time Frame - Start, Time Frame - End
Notes: All time frames from all extent groups are included.

1.5. Actual or planned geographic coverage of the data:

W: -117.14, E: -117.09, N: 32.577, S: 32.532

Tijuana River, CA NERR

Taken From: Extents | Geographic Area Bounds, Geographic Area Description
Notes: All geographic areas from all extent groups are included.

1.6. Type(s) of data:
(e.g., digital numeric data, imagery, photographs, video, audio, database, tabular data, etc.)

No information found

Taken From: Data Set Information | Data Presentation Form

1.7. Data collection method(s):
(e.g., satellite, airplane, unmanned aerial system, radar, weather station, moored buoy, research vessel, autonomous underwater vehicle, animal tagging, manual surveys, enforcement activities, numerical model, etc.)

No information found

Taken From: Acquisition Information | Instruments, Platforms

1.8. If data are from a NOAA Observing System of Record, indicate name of system:

Always left blank due to field exemption

1.8.1. If data are from another observing system, please specify:

Always left blank due to field exemption

2. Point of Contact for this Data Management Plan (author or maintainer)

2.1. Name:

Jeremy Cothran

Taken From: Support Roles (Metadata Contact) | Person
Notes: The name of the Person of the most recent Support Role of type "Metadata Contact" is used. The support role must be in effect.

2.2. Title:

Metadata Contact

Always listed as "Metadata Contact"

2.3. Affiliation or facility:

Taken From: Support Roles (Metadata Contact) | Organization
Notes: The name of the Organization of the most recent Support Role of type "Metadata Contact" is used. This field is required if applicable.

2.4. E-mail address:

jeremy.cothran@gmail.com

Notes: The email address is taken from the address listed for the Person assigned as the Metadata Contact in Support Roles.

2.5. Phone number:

No information found

Notes: The phone number is taken from the number listed for the Person assigned as the Metadata Contact in Support Roles. If the phone number is missing or incorrect, please contact your Librarian to update the Person record.

3. Responsible Party for Data Management

Program Managers, or their designee, shall be responsible for assuring the proper management of the data produced by their Program. Please indicate the responsible party below.

3.1. Name:

No information found

Taken From: Support Roles (Data Steward) | Person
Notes: The name of the Person of the most recent Support Role of type "Data Steward" is used. The support role must be in effect.

3.2. Position Title:

Data Steward

Always listed as "Data Steward"

4. Resources

Programs must identify resources within their own budget for managing the data they produce.

4.1. Have resources for management of these data been identified?

No information found

Taken From: Data Management | Have resources for management of these data been identified?

4.2. Approximate percentage of the budget for these data devoted to data management (specify percentage or "unknown"):

No information found

Taken From: Data Management | Approximate percentage of budget for these data devoted to data management

5. Data Lineage and Quality

NOAA has issued Information Quality Guidelines for ensuring and maximizing the quality, objectivity, utility, and integrity of information which it disseminates.

5.1. Processing workflow of the data from collection or acquisition to making it publicly accessible
(describe or provide URL of description):

Lineage Statement:
This information is detailed within the project links.

Process Steps:

N/A

Taken From: Lineage | Lineage Statement, Process Steps (Process Date/Time, Source Citation Title, Description)

5.1.1. If data at different stages of the workflow, or products derived from these data, are subject to a separate data management plan, provide reference to other plan:

Always left blank

5.2. Quality control procedures employed
(describe or provide URL of description):

This information is detailed within the project links.

Taken From: Data Quality | Quality Control Procedures Employed

6. Data Documentation

The EDMC Data Documentation Procedural Directive requires that NOAA data be well documented, specifies the use of ISO 19115 and related standards for documentation of new data, and provides links to resources and tools for metadata creation and validation.

6.1. Does metadata comply with EDMC Data Documentation directive?

No

Notes: All required DMP fields must be populated and valid to comply with the directive.

6.1.1. If metadata are non-existent or non-compliant, please explain:

Missing/invalid information:

1.6. Type(s) of data
1.7. Data collection method(s)
3.1. Responsible Party for Data Management
4.1. Have resources for management of these data been identified?
4.2. Approximate percentage of the budget for these data devoted to data management
7.1. Do these data comply with the Data Access directive?
7.1.1. If data are not available or has limitations, has a Waiver been filed?
7.1.2. If there are limitations to data access, describe how data are protected
7.3. Data access methods or services offered
7.4. Approximate delay between data collection and dissemination
8.1. Actual or planned long-term data archive location
8.2. Data storage facility prior to being sent to an archive facility
8.3. Approximate delay between data collection and submission to an archive facility
8.4. How will the data be protected from accidental or malicious modification or deletion prior to receipt by the archive?

Notes: Required DMP fields that are not populated or invalid are listed here.

6.2. Name of organization or facility providing metadata hosting:

NMFS Office of Science and Technology

Always listed as "NMFS Office of Science and Technology"

6.2.1. If service is needed for metadata hosting, please indicate:

Always left blank

6.3. URL of metadata folder or data catalog, if known:

https://www.fisheries.noaa.gov/inport/item/78501

Always listed as the URL to the InPort Data Set record

6.4. Process for producing and maintaining metadata
(describe or provide URL of description):

Metadata produced and maintained in accordance with the NOAA Data Documentation Procedural Directive: https://nosc.noaa.gov/EDMC/DAARWG/docs/EDMC_PD-Data_Documentation_v1.pdf

Always listed with the above statement

7. Data Access

NAO 212-15 states that access to environmental data may only be restricted when distribution is explicitly limited by law, regulation, policy (such as those applicable to personally identifiable information or protected critical infrastructure information or proprietary trade information) or by security requirements. The EDMC Data Access Procedural Directive contains specific guidance, recommends the use of open-standard, interoperable, non-proprietary web services, provides information about resources and tools to enable data access, and includes a Waiver to be submitted to justify any approach other than full, unrestricted public access.

7.1. Do these data comply with the Data Access directive?

No information found

Taken From: Data Management | Do these data comply with the Data Access directive?

7.1.1. If the data are not to be made available to the public at all, or with limitations, has a Waiver (Appendix A of Data Access directive) been filed?

No information found

Taken From: Data Management | Is access to the data limited based on an approved waiver?

7.1.2. If there are limitations to public data access, describe how data are protected from unauthorized access or disclosure:

None

Taken From: Access Info | Data Access Constraints

7.2. Name of organization of facility providing data access:

Office for Coastal Management (OCM)

Taken From: Support Roles (Distributor) | Organization
Notes: The name of the Organization of the most recent Support Role of type "Distributor" is used. The support role must be in effect. This information is not required if an approved access waiver exists for this data.

7.2.1. If data hosting service is needed, please indicate:

Taken From: Data Management | If data hosting service is needed, please indicate
Notes: This field is required if a Distributor has not been specified.

7.2.2. URL of data access service, if known:

https://nerrssciencecollaborative.org/project/LMiller2021

Taken From: Distribution Info | Download URL
Notes: All URLs listed in the Distribution Info section will be included. This field is required if applicable.

7.3. Data access methods or services offered:

No information found

Taken From: Access Info | Data Access Procedure

7.4. Approximate delay between data collection and dissemination:

No information found

Taken From: Data Management | Approximate delay between data collection and dissemination

7.4.1. If delay is longer than latency of automated processing, indicate under what authority data access is delayed:

Taken From: Data Management | If delay is longer than latency of automated processing, indicate under what authority data access is delayed
Notes: This field is required if applicable.

8. Data Preservation and Protection

The NOAA Procedure for Scientific Records Appraisal and Archive Approval describes how to identify, appraise and decide what scientific records are to be preserved in a NOAA archive.

8.1. Actual or planned long-term data archive location:
(Specify NCEI-MD, NCEI-CO, NCEI-NC, NCEI-MS, World Data Center (WDC) facility, Other, To Be Determined, Unable to Archive, or No Archiving Intended)

No information found

Taken From: Data Management | Actual or planned long-term data archive location

8.1.1. If World Data Center or Other, specify:

Taken From: Data Management | Actual or planned long-term data archive location
Notes: This field is required if archive location is World Data Center or Other.

8.1.2. If To Be Determined, Unable to Archive or No Archiving Intended, explain:

Taken From: Data Management | If To Be Determined, Unable to Archive or No Archiving Intended, explain
Notes: This field is required if archive location is To Be Determined, Unable to Archive, or No Archiving Intended.

8.2. Data storage facility prior to being sent to an archive facility (if any):

No information found

Taken From: Physical Location | Organization, City, State, Location Description
Notes: Physical Location Organization, City and State are required, or a Location Description is required.

8.3. Approximate delay between data collection and submission to an archive facility:

No information found

Taken From: Data Management | Approximate delay between data collection and submission to an archive facility

8.4. How will the data be protected from accidental or malicious modification or deletion prior to receipt by the archive?
Discuss data back-up, disaster recovery/contingency planning, and off-site data storage relevant to the data collection

No information found

Taken From: Data Management | How will the data be protected from accidental or malicious modification or deletion prior to receipt by the archive?

9. Additional Line Office or Staff Office Questions

Line and Staff Offices may extend this template by inserting additional questions in this section.

Always left blank