26491
Genetic Analysis Database - NRDA
Data Set
Published / External
25885
Genetic Analysis Database - NRDA
Project
In Work
Samples of skin and other tissues are collected from marine mammals along the North-Central Gulf of Mexico from live animals through remote biopsy or live-capture or stranded animals during 2010-2014. DNA is extracted from these samples, sequenced, and analyzed using a variety of methods to support phylogenetic studies, stock delineation studies, and a variety of other analyses related to cetacean genetics associated with the Natural Resources Damage Assessment associated with the Deepwater Horizon oil spill. These data sets include the sequence and other genetic data collected from these samples along with analytical results. These data support stock delineation studies and a variety of other analyses related to cetacean genetics and are incorporated into the Deepwater Horizon Damage Assessment and Restoration Plan.
To study genetic relationships of cetacean populations in the Gulf of Mexico in support of the injury assessment for the Deepwater Horizon oil spill.
Databases of genetic data collected from marine mammal tissue samples including sexes, genetic sequence data, microsattellite markers, sNPs, etc. Collected data are in a variety of formats with variable levels of QA/QC depending upon the project status.
Southeast Fisheries Science Center
Miami
FL
USA
Location Of The Main Office Of The South East Fisheries Science Center
Data Set
Table (digital)
Genetic sequenecer
N/A
N/A
Data Steward
2010
Person
Garrison, Lance
Lance.Garrison@noaa.gov
75 Virginia Beach Dr
Miami
FL
33149
305-361-4488
305-361-4478
8:00 AM - 4:30 PM EST/EDT
Contact by email preferred.
Distributor
2010
Organization
Southeast Fisheries Science Center
SEFSC
75 Virginia Beach Drive
Miami
FL
33149
USA
(305)361-5761
https://www.fisheries.noaa.gov/about/southeast-fisheries-science-center
About SEFSC
Online Resource
8:00 a.m. - 4:30 p.m. EST
Metadata Contact
2010
Person
Rosel, Patricia
patricia.rosel@noaa.gov
646 Cajundome Blvd
Lafayette
LA
70506-4291
337-291-2123
337-291-2106
Contact by email preferred.
Point of Contact
2010
Person
Garrison, Lance
Lance.Garrison@noaa.gov
75 Virginia Beach Dr
Miami
FL
33149
305-361-4488
305-361-4478
8:00 AM - 4:30 PM EST/EDT
Contact by email preferred.
Ground Condition
-98
-80.5
31
24.5
Gulf Of Mexico
Continuing
2010
Sensitive
The data will be available from a public web server once an access methodology has been developed.
Waiver Needed
Intensive QA/QC procedures are employed during the processing and handling of samples to avoid cross-contamination. Individual sequences are reviewed and verified against standards to ensure data integrity and quality. QA/QC procedures may vary among projects based upon the study goals of individual contributors.
No
0
No
Yes
No
365
N/A
To Be Determined
365
The data resides on a secure government network requiring multi-factor authentication for network access.
1
Tissue samples along with information about their collection are contributed by researchers. The DNA is extracted from these tissues and DNA sequence or other data are collected. The resulting data are incorporated into analyses of species identification, sex determination, or stock delineation.
gov.noaa.nmfs.inport:26491
Lee Weinberger
2015-08-17T16:20:51
SysAdmin InPortAdmin
2022-08-09T17:11:11
2021-04-29
Southeast Fisheries Science Center
SEFSC
75 Virginia Beach Drive
Miami
FL
33149
USA
(305)361-5761
www.sefsc.noaa.gov
8:00 a.m. - 4:30 p.m. EST
1001
Public
No
2021-04-29
1 Year
2022-04-29