gov.noaa.nmfs.inport:39257
eng
UTF8
dataset
National Centers for Coastal Ocean Science
resourceProvider
NCCOS Scientific Data Coordinator
NCCOS.data@noaa.gov
pointOfContact
2024-02-29T00:00:00
ISO 19115-2 Geographic Information - Metadata Part 2 Extensions for imagery and gridded data
ISO 19115-2:2009(E)
National Status and Trends, Benthic Surveillance Project Aryl Hydrocarbon Hydrolase (AHH) Data, 1988-1992, National Centers for Coastal Ocean Science
bsahh_h
1992
publication
NOAA/NMFS/EDM
39257
https://www.fisheries.noaa.gov/inport/item/39257
WWW:LINK-1.0-http--link
Full Metadata Record
View the complete metadata record on InPort for more information about this dataset.
information
Piniak, Greg
greg.piniak@noaa.gov
principalInvestigator
https://products.coastalscience.noaa.gov/collections/ltmonitoring/nsandt/default.aspx
WWW:LINK-1.0-http--link
Citation URL
Online Resource
download
tableDigital
In order to determine the current status of and detect any long-term trends in the environmental quality of U.S. nearshore waters, NOAA initiated the National Status and Trends program in 1984 with its National Benthic Surveillance Project. The primary objective of the Benthic Surveillance Project was to quantify concentrations of a suite of organic and inorganic contaminants in the livers of fish and surficial sediments from selected sites in the coastal and estuarine waters of the United States. In addition, the levels of certain indicators of the biological effects of these contaminants were measured. Incidences of visible lesions, including fin erosion, have been noted and histopathological examinations of various tissues have been carried out. Originally histopathological examinations determined the prevalence of any identifiable disease conditions in samples of liver, kidney, and gill tissue.In addition the Benthic Surveillance Project analyzed fish liver tissue sample for cytochrome P4501A (CYP1A) activities in liver via analysis for aryl hydrocarbon hydrolase (ahh). The induction of hepatic CYP1A activity is one of the earliest physiological changes detected after exposure to chemical contaminants. A number of studies have shown that measurement of these biochemical alterations combined with measurement of the above-mentioned injuries, give a more consistent assessment of contaminant exposure in indigenous fish that do single bioeffects measurements.
In response to concerns over environmental quality of the Nation's coastal and estuarine ecosystems, NOAA created the National Status and Trends (NSandT) Program in 1984. From 1984 through 1993, the Benthic Surveillance Project monitored chemical concentrations in the livers (and for metabolites of PAH's in the bile) of bottom-dwelling fish and in sediments at the sites of fish capture. The Benthic Surveillance Project also measured the biological effects of contaminant exposure, primarily as prevalence's of toxicopathic liver diseases.
completed
NCCOS Scientific Data Coordinator
NCCOS.data@noaa.gov
pointOfContact
NCCOS Scientific Data Coordinator
NCCOS.data@noaa.gov
custodian
notPlanned
NCCOS Research Data Type > Field Observation
NCCOS Research Priority > Long-term Monitoring
NCCOS Research Priority > Stressors, Impacts, Mitigation, and Restoration (SIMR)
NCCOS Research Topic > Bioeffects/Toxicity
NCCOS Research Topic > Chemical Contaminants
NCCOS Research Topic > Monitoring
NSandT
ahh
aryl hydrocarbon hydrolase
chemical
coastal monitoring
contaminant
fish liver
oceans
pollutant
theme
Apalachicola Bay, St. George Island
Arroyo Colorado, Arroyo City
Baltimore Harbor, Brewerton Channel
Barataria Bay, Barataria Pass
Biscayne Bay, North Bay
Bodega Bay, North
Boston Harbor, Deer Island
Boston Harbor, Hull Bay
Boston Harbor, Mystic River
Boston Harbor, Quincy Bay
Buzzards Bay, West Island
Calcasieu River, Prien Lake
Calcasieu River, West Cove
Cape Elizabeth, Richmond Island
Cape Fear River, Horseshoe Shaol
Charleston Harbor, South Channel
Charlotte Harbor, Cape Haze
Chesapeake Bay, Chester River
Chesapeake Bay, James River
Chesapeake Bay, Patuxent River
Choctawhatchee Bay, Choctawhatchee Bay
Columbia River, Desdemona Sands
Coos Bay, North Bend
Dana Point Harbor, Outside
Dana Point, Inside Harbor
Delaware Bay, Cherry Island Range
Galveston Bay, Cedar Bayou
Galveston Bay, Eagle Point
Galveston Bay, East Bay
Galveston Bay, Goat Islands
Galveston Bay, Greens Bayou
Galveston Bay, Morgans Point
Great Bay, Intracoastal Waterway
Hudson River, Englewood Cliffs
Johns Bay, Pemaquid Neck
Lake Pontchartrain, North Shore
Lake Pontchartrain, South Shore
Lavaca Bay, Point Comfort
Long Island Sound, Lloyd Point
Long Island Sound, Rocky Point
Lower Laguna Madre, Laguna Heights
Lower Laguna Madre, Long Island
Lutak Inlet, Chilkoot River Mouth
Massachusetts Bay, Plymouth Entrance
Mission Bay, Outside
Mississippi River Delta, Head of Passes
Mississippi River Delta, Southeast Pass
Mobile Bay, North Point
Monterey Bay, Indian Head Beach
NCCOS Research Location > Geographic Area > Coastal Ocean
NCCOS Research Location > Region > Alaska
NCCOS Research Location > Region > East Coast
NCCOS Research Location > Region > Gulf of Mexico
NCCOS Research Location > Region > West Coast
NCCOS Research Location > U.S. States and Territories > Alabama
NCCOS Research Location > U.S. States and Territories > Alaska
NCCOS Research Location > U.S. States and Territories > California
NCCOS Research Location > U.S. States and Territories > Connecticut
NCCOS Research Location > U.S. States and Territories > Delaware
NCCOS Research Location > U.S. States and Territories > Florida
NCCOS Research Location > U.S. States and Territories > Georgia
NCCOS Research Location > U.S. States and Territories > Louisiana
NCCOS Research Location > U.S. States and Territories > Maine
NCCOS Research Location > U.S. States and Territories > Maryland
NCCOS Research Location > U.S. States and Territories > Massachusetts
NCCOS Research Location > U.S. States and Territories > Mississippi
NCCOS Research Location > U.S. States and Territories > New Jersey
NCCOS Research Location > U.S. States and Territories > New York
NCCOS Research Location > U.S. States and Territories > North Carolina
NCCOS Research Location > U.S. States and Territories > Oregon
NCCOS Research Location > U.S. States and Territories > Rhode Island
NCCOS Research Location > U.S. States and Territories > South Carolina
NCCOS Research Location > U.S. States and Territories > Texas
NCCOS Research Location > U.S. States and Territories > Virginia
NCCOS Research Location > U.S. States and Territories > Washington
Narragansett Bay, Prudence Island
New Bedford Harbor, Clarks Point
Niantic Bay, Black Point
Oceanside Harbor, Outside
Pamlico Sound, Jones Bay
Pascagoula River, Escatawpa River
Pascagoula River, Pascagoula River
Penobscot Bay, Colt Head Island
Pensacola Bay, Pensacola Bay
Prince William Sound, Port Valdez
Puget Sound, Commencement Bay
Puget Sound, Elliott Bay
Puget Sound, Nisqually Reach
Raritan Bay, East Reach
Raritan Bay, Gravesend Bay
Raritan Bay, Upper Bay
Raritan Bay, West Reach
Salem Harbor, Folger Point
San Antonio Bay, Mosquito Point
San Diego Bay, Harbor Island
San Diego Bay, National City
San Diego Bay, North
San Diego Bay, Outside
San Diego Bay, Shelter Island
San Diego Bay, Twenty Eighth Street
San Francisco Bay, Castro Creek
San Francisco Bay, Hunters Point
San Francisco Bay, Oakland Estuary
San Francisco Bay, Redwood City
San Francisco Bay, San Pablo Bay
San Francisco Bay, Southampton Shoal
San Luis Obispo Bay, San Luis Obispo Bay
San Pedro Bay, Cerritos Channel
San Pedro Bay, Long Beach
San Pedro Bay, Mid Harbor
San Pedro Bay, Outer Harbor
San Pedro Bay, Seal Beach
Santa Monica Bay, North
Santa Monica Bay, South
Santa Monica Bay, Southeast
Santa Monica Bay, West
Sapelo Sound, Dog Hammock
Savannah River, Elba Island
Skagway, Skagway River
St. Andrews Bay, Military Point
St. Johns River, Arlington Channel
St. Lucie River, Stuart
Tampa Bay, Northern Tampa Bay
U.S. Exclusive Economic Zone
place
DOC/NOAA/NOS/NCCOS > National Centers for Coastal Ocean Science, National Ocean Service, NOAA, U.S. Department of Commerce
dataCentre
Global Change Master Directory (GCMD) Data Center Keywords
2017-04-24
publication
8.5
NSandT
project
InPort
otherRestrictions
Cite As: National Centers for Coastal Ocean Science, [Date of Access]: National Status and Trends, Benthic Surveillance Project Aryl Hydrocarbon Hydrolase (AHH) Data, 1988-1992, National Centers for Coastal Ocean Science [Data Date Range], https://www.fisheries.noaa.gov/inport/item/39257.
NOAA provides no warranty, nor accepts any liability occurring from any incomplete, incorrect, or misleading data, or from any incorrect, incomplete, or misleading use of the data. It is the responsibility of the user to determine whether or not the data is suitable for the intended purpose.
otherRestrictions
Access Constraints: None
otherRestrictions
Use Constraints: NOAA requests that all individuals who download NSandT data acknowledge the source of these data in any reports, papers, or presentations. If you publish these data, please include a statement similar to: "Some or all of the data described in this article were produced by NOAA through its National Status and Trends Program".
otherRestrictions
Distribution Liability: None
unclassified
NOAA Data Management Plan (DMP)
NOAA/NMFS/EDM
39257
https://www.fisheries.noaa.gov/inportserve/waf/noaa/nos/nccos/dmp/pdf/39257.pdf
WWW:LINK-1.0-http--link
NOAA Data Management Plan (DMP)
NOAA Data Management Plan for this record on InPort.
information
crossReference
vector
eng; US
environment
Microsoft Windows 2000 Version 5.0 (Build 2195) Service Pack 4; ESRI ArcCatalog 8.3.0.800
-166.5
-67.333
25.615
70.5
| Currentness: Publication Date
1988
1992
false
eng
false
Dataset Parameters for Benthic Surveillance Aryl Hydrocarbon Hydrolase data
2017-04-17
publication
Text (Unstructured)
XML (Structured Text)
NCCOS Scientific Data Coordinator
NCCOS.data@noaa.gov
distributor
https://products.coastalscience.noaa.gov/collections/ltmonitoring/nsandt/default.aspx
WWW:LINK-1.0-http--link
https://products.coastalscience.noaa.gov/collections/ltmonitoring/nsandt/default.aspx
Live Data and Maps
download
https://products.coastalscience.noaa.gov/collections/ltmonitoring/nsandt/default.aspx
WWW:LINK-1.0-http--link
https://products.coastalscience.noaa.gov/collections/ltmonitoring/nsandt/default.aspx
Live Data and Maps
download
dataset
Accuracy
The quality of the analytical data generated by the NSandT Program is overseen by the QA Project component, which has been in operation since 1985 and is designed to document sampling and analytical procedures, and to reduce intra-laboratory and inter-laboratory variation. The QA Project documentation will facilitate comparisons among different monitoring programs with similar QA activities and thus will extend the temporal and spatial scale of such programs. To document laboratory expertise, the QA Project requires all NSandT laboratories to participate in a continuing series of intercomparison exercises utilizing a variety of materials.
Horizontal Positional Accuracy
The same kind of field/site data have been supplied since the start of the Benthic Surveillance Project, in 1984. Original site coordinates were derived from Loran-C time conversions. Early sites information resulting from Loran-C was converted from time delay information to latitudes and longitudes. These earlier data may be suspect when sites were located close to large structures that could have interfered with accurate time delays. When GPS was first available the signal was intentionally degraded so earlier coordinate information, even if it resulted from GPS, is not as accurate as data would be today. Because fish are not sessile, fish trawls have been made along different tracks in the water body of interest. The latitude/ longitude coordinates provided in this file represent a site center and trawling occurs within a 1 km radius of this location.
Completeness Report
Analytical protocols for the quantification of the NSandT organic contaminants were developed by MacLeod et al. (1984) at the NMFS (National Marine Fisheries Service) Northwest Fisheries Science Center in Seattle, WA. These methods were prescribed for all NMFS laboratories participating in the Benthic Surveillance Program, when it began in 1984. Three NMFS laboratories used these methods in 1984: Northeast Fisheries Science Center (NEFSC), Gloucester, MA; Southeast Fisheries Science Center (SEFSC), Charleston, SC; and Northwest Fisheries Science Center (NWFSC), Seattle WA. The philosophy associated with the development of exacting protocols for the quantification of organic contaminants was that the same analytical methods would increase the likelihood of data being comparable among laboratories. Even though interlaboratory comparisons were initiated at the start of the NSandT Program, it was felt that a method-driven QA and analytical effort for the quantification of organic contaminants was the best way to begin. In 1985, the protocols were updated by MacLeod et al., 1985. This method has been further edited and can be found in volume 1 of Technical Memorandum 71. The NSandT Mussel Watch Project (MWP) began in 1986. At that time, both the MWP and BSP laboratories were allowed to use any analytical method if it could be proven that the proposed alternate procedure was equal to or better than earlier MacLeod et al. (1984,1985) methods.
Conceptual Consistency
Fish in the correct size range were dissected in the onboard laboratory immediately after collection. This ensured that a determination could be made regarding whether sufficient material had been collected and whether the sample material was of high quality. If either one of these criteria was not met, the opportunity existed to continue sample collection. Also, field dissection minimizes contamination problems associated with dissection of frozen fish samples. Frozen fish tissues when thawed, may lose their integrity and one tissue type may contaminate another (e.g., a liver sample could be contaminated by PAH metabolites from the bile duct).Because most fish were dissected onboard ship, a special effort was made to develop an environment as close to clean-room conditions as possible. All fish were dissected in positive pressure laminar flow hoods. Air was drawn into the laminar flow hood from above and filtered by a high efficiency particle attenuator (HEPA) filter before it passed over the fish samples. Stainless steel tools were used to dissect fish for organic analysis. Titanium tools were used to dissect fish for trace metal analyses because tools made of this element do not pose the problem of introducing nickel, chromium, and/or iron into the specimens to be analyzed. Specimens were analyzed for the latter three elements by the NSandT Program. After knives had been sharpened, and before dissections began at a new site or of a new species, the dissection equipment was thoroughly cleaned with detergent solution, rinsed extensively with tap water, rinsed in distilled or high-purity water (i.e., milli-Q or HPLC-grade water), rinsed with isopropanol (dichloromethane before 1990) under a fume hood, followed by a rinse with distilled water, and placed on a similarly cleaned Teflon cutting board that was allowed to air-dry in the laminar-flow hood. Between individual fish of the same species at the same site, the tools were rinsed with distilled water before any fluid or tissue had a chance to dry on the knife. Sexually mature fish were primarily used in this program, determined by size of each species.
The primary collection apparatus was Otter trawls. Occasionally, fish were taken with hook and line, or with seine nets. These alternate collection methods were necessary because larger fish, such as older Atlantic croaker, were able to avoid an Otter trawl, or were found in untrawlable habitats such as shallow water, along marsh edges, and over oyster reefs. Fish liver tissue samples were analyzed for cytochrome P4501A (CYP1A) activities in liver via analysis for aryl hydrocarbon hydrolase (ahh).The analytical instruments were calibrated by standard laboratory procedures including: constructing calibration curves, running blank and spiked quality control samples, and analyzing standard reference materials.Process Date Range is 1988 - 1992
1992-01-01T00:00:00