NOAA/NSF ECOHAB Heterosigma CTD
Northwest Fisheries Science Center
Entity
(ENT)
| ID: 36788
| Published / External
Created: 2017-02-13
|
Last Modified: 2022-08-09
Data Set (DS) | ID: 17794
ID: 36788
Entity (ENT)
* Discovery• First Pass
» Metadata Rubric
Item Identification
* » Title | NOAA/NSF ECOHAB Heterosigma CTD |
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Short Name | NOAA/NSF ECOHAB Heterosigma CTD |
* Status | Planned |
Creation Date | |
Revision Date | |
• Publication Date | |
* » Abstract |
Over one half of the worlds fish production for human consumption currently comes from aquaculture, while wild fisheries yields are either stable or declining. Recurring threats from the raphidophyte, Heterosigma akashiwo Hada (Sournia) have caused extensive damage ($2-6 million per episode) to wild and net-penned fish of Puget Sound, Washington, and are believed to be increasing in scope and magnitude in this region, and elsewhere in the world over the past two decades. The mechanism of H. akashiwo toxicity is not well understood. The toxic activity of H. akashiwo has been attributed to the production of reactive oxygen species, brevetoxin-like compound(s), excessive mucus, or hemolytic activity; however these mechanisms are not confirmed consistently in all fish-killing events or cultured strains. The difficulty of conducting research with active, toxin-producing field populations of H. akashiwo have resulted in conflicting findings from those obtained in lab culture studies, thereby limiting the ability of fish farmers to respond to these episodic blooms. Collaborators in this project are: Vera Trainer (NWFSC), William Cochlan (San Francisco State University), Charles Trick (University of Western Ontario), and Mark Wells (University of Maine). The overall goal of this project is to identify the primary toxic element and the specific environmental factors that stimulate fish-killing H. akashiwo blooms, and thereby provide managers with the fundamental tools needed to help reduce the frequency and toxic magnitude of these harmful algal events. Studies to date have provided incomplete and conflicting observations on the mode of toxicity and the environmental stimulation of toxification. We propose a three-pronged approach to study the environmental controls of H. akashiwo growth and toxin production; laboratory culture experiments, field observations, and bottle and mesocosm manipulation experiments.The project objectives are to: 1. identify the element(s) of toxic activity (inorganic, organic, or synergistic) associated with blooms of H. akashiwo and the various cellular morphologies of this alga, 2. determine the environmental parameters that stimulate the growth success and expression of cell toxicity in the H. akashiwo populations of Puget Sound. Because previous studies have used H. akashiwo cultures with little or no toxic activity, our approach is to use a living laboratory to study H. akashiwo bloom ecology and toxicity using natural assemblages. Using a mobile lab at field sites where H. akashiwo cells are regularly found will enable us to fully characterize the toxic element(s) responsible for fish mortality, and the environmental factors influencing toxicity. Findings from annual field studies in June and two rapid response deployments during major bloom events will be confirmed using laboratory studies with fresh ( 6 mo. old) isolates. The expected results are: 1. determination of the key elements of toxicity of H. akashiwo, 2. characterization of the environmental variables that influence either the induction or depression of elements of toxic activity in H. akashiwo, 3. characterization of environmentally-induced metabolites corresponding to condition of toxin production (metabolomics) and 4. design of a strategy for realistic mitigation of H. akashiwo activities in Puget Sound, Washington. This is a stand-alone project funded for 3 years through the NOAA/NSF ECOHAB program. |
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Entity Information
Entity Type | Spreadsheet |
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Active Version? | Y |
Alias | |
Schema Name | PARR |
» Description |
Over one half of the worlds fish production for human consumption currently comes from aquaculture, while wild fisheries yields are either stable or declining. Recurring threats from the raphidophyte, Heterosigma akashiwo Hada (Sournia) have caused extensive damage ($2-6 million per episode) to wild and net-penned fish of Puget Sound, Washington, and are believed to be increasing in scope and magnitude in this region, and elsewhere in the world over the past two decades. The mechanism of H. akashiwo toxicity is not well understood. The toxic activity of H. akashiwo has been attributed to the production of reactive oxygen species, brevetoxin-like compound(s), excessive mucus, or hemolytic activity; however these mechanisms are not confirmed consistently in all fish-killing events or cultured strains. The difficulty of conducting research with active, toxin-producing field populations of H. akashiwo have resulted in conflicting findings from those obtained in lab culture studies, thereby limiting the ability of fish farmers to respond to these episodic blooms. Collaborators in this project are: Vera Trainer (NWFSC), William Cochlan (San Francisco State University), Charles Trick (University of Western Ontario), and Mark Wells (University of Maine). The overall goal of this project is to identify the primary toxic element and the specific environmental factors that stimulate fish-killing H. akashiwo blooms, and thereby provide managers with the fundamental tools needed to help reduce the frequency and toxic magnitude of these harmful algal events. Studies to date have provided incomplete and conflicting observations on the mode of toxicity and the environmental stimulation of toxification. We propose a three-pronged approach to study the environmental controls of H. akashiwo growth and toxin production; laboratory culture experiments, field observations, and bottle and mesocosm manipulation experiments.The project objectives are to: 1. identify the element(s) of toxic activity (inorganic, organic, or synergistic) associated with blooms of H. akashiwo and the various cellular morphologies of this alga, 2. determine the environmental parameters that stimulate the growth success and expression of cell toxicity in the H. akashiwo populations of Puget Sound. Because previous studies have used H. akashiwo cultures with little or no toxic activity, our approach is to use a living laboratory to study H. akashiwo bloom ecology and toxicity using natural assemblages. Using a mobile lab at field sites where H. akashiwo cells are regularly found will enable us to fully characterize the toxic element(s) responsible for fish mortality, and the environmental factors influencing toxicity. Findings from annual field studies in June and two rapid response deployments during major bloom events will be confirmed using laboratory studies with fresh ( 6 mo. old) isolates. The expected results are: 1. determination of the key elements of toxicity of H. akashiwo, 2. characterization of the environmental variables that influence either the induction or depression of elements of toxic activity in H. akashiwo, 3. characterization of environmentally-induced metabolites corresponding to condition of toxin production (metabolomics) and 4. design of a strategy for realistic mitigation of H. akashiwo activities in Puget Sound, Washington. This is a stand-alone project funded for 3 years through the NOAA/NSF ECOHAB program. |
Change Summary |
Data Attributes
Attribute Summary
Score | Req'd? | PKey? | » Name | Data Storage Type | Description |
---|---|---|---|---|---|
100 | No | No | Event | VARCHAR2 | The name of the individual cruise or event in which samples were collected for the overall project. |
100 | No | No | Event start date | DATE | The date on which the individual cruise or event began (local time). |
100 | No | No | Event end date | DATE | The date on which the individual cruise or event ended (local time). |
100 | No | No | Station | VARCHAR2 | The name or identification number of a given station at which samples were collected. |
100 | No | No | Sampling Date | DATE | The date (local time) on which as sample was collected. |
100 | No | No | Sampling Start Time | DATE | The time (local time) on the date in which a sample began to be collected. |
100 | No | No | Sampling End Time | DATE | The time (local time) on the date in which a sample was finished being collected. |
100 | No | No | Latitude | NUMBER | The latitude of the sampling station in decmal degrees. Units for values are decimal degrees. |
100 | No | No | Longitude | NUMBER | The longitude of the sampling station in decimal degrees. Units for values are decimal degrees. |
100 | No | No | Station Depth (m) | NUMBER | The water depth at a given station. Units for values are meters. |
100 | No | No | CastNum | NUMBER | The number of the CTD cast performed on a specific date. |
100 | No | No | Depth(m) | NUMBER | The depth at which the data were collected. Units for values are meters. |
100 | No | No | Pr(db) | NUMBER | The pressure reading at which the data were collected. Units for values are decibars. |
100 | No | No | dm | NUMBER | A relative measurement of the depth at which the samples were collected using a specified reference depth. Units for values are meters. |
100 | No | No | scans | NUMBER | The number of data scans that were averaged to determine the data value for a given depth bin. |
100 | No | No | FL | NUMBER | The fluorescence reading from the chlorophyll fluourometer. Units for values are volts. |
100 | No | No | Calib_Chl_a | NUMBER | Chlorophyll a values determined using the equation of a line derived from a regression of extracted chlorphyll a analyses and fluorometer voltage. |
100 | No | No | T | NUMBER | Water temperature. Units for values are degrees celsius. |
100 | No | No | S | NUMBER | Seawater salinity. Units for values are unitless. |
100 | No | No | Cond | NUMBER | Seawater conductivity. Units for values are microsiemens per centimeter. |
100 | No | No | ST | NUMBER | Seawater density. Units for values are Sigma-t units_kilograms per cubic meter. |
Attribute Details
Attribute Name | Event |
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Seq. Order | 1 |
Data Storage Type | VARCHAR2 |
Max Length | |
Min Length | |
Required | No |
Primary Key | No |
Precision | |
Scale | |
Status | Active |
Description |
The name of the individual cruise or event in which samples were collected for the overall project. |
General Data Type | VARCHAR2 |
Unit of Measure | |
Case Restriction | |
Display Example | |
Format Mask | |
Null Value | |
Null Value Meaning | |
Allowed Values | As provided |
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Derivation | |
Validation Rules |
Attribute Name | Event start date |
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Seq. Order | 2 |
Data Storage Type | DATE |
Max Length | |
Min Length | |
Required | No |
Primary Key | No |
Precision | |
Scale | |
Status | Active |
Description |
The date on which the individual cruise or event began (local time). |
General Data Type | DATE |
Unit of Measure | |
Case Restriction | |
Display Example | |
Format Mask | mm/dd/yyyy |
Null Value | |
Null Value Meaning | |
Allowed Values | As provided |
Default Value | |
Foreign Key Relations | |
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Validation Rules |
Attribute Name | Event end date |
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Seq. Order | 3 |
Data Storage Type | DATE |
Max Length | |
Min Length | |
Required | No |
Primary Key | No |
Precision | |
Scale | |
Status | Active |
Description |
The date on which the individual cruise or event ended (local time). |
General Data Type | DATE |
Unit of Measure | |
Case Restriction | |
Display Example | |
Format Mask | mm/dd/yyyy |
Null Value | |
Null Value Meaning | |
Allowed Values | As provided |
Default Value | |
Foreign Key Relations | |
Derivation | |
Validation Rules |
Attribute Name | Station |
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Seq. Order | 4 |
Data Storage Type | VARCHAR2 |
Max Length | |
Min Length | |
Required | No |
Primary Key | No |
Precision | |
Scale | |
Status | Active |
Description |
The name or identification number of a given station at which samples were collected. |
General Data Type | VARCHAR2 |
Unit of Measure | |
Case Restriction | |
Display Example | |
Format Mask | |
Null Value | |
Null Value Meaning | |
Allowed Values | As provided |
Default Value | |
Foreign Key Relations | |
Derivation | |
Validation Rules |
Attribute Name | Sampling Date |
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Seq. Order | 5 |
Data Storage Type | DATE |
Max Length | |
Min Length | |
Required | No |
Primary Key | No |
Precision | |
Scale | |
Status | Active |
Description |
The date (local time) on which as sample was collected. |
General Data Type | DATE |
Unit of Measure | |
Case Restriction | |
Display Example | |
Format Mask | mm/dd/yyyy |
Null Value | |
Null Value Meaning | |
Allowed Values | As provided |
Default Value | |
Foreign Key Relations | |
Derivation | |
Validation Rules |
Attribute Name | Sampling Start Time |
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Seq. Order | 6 |
Data Storage Type | DATE |
Max Length | |
Min Length | |
Required | No |
Primary Key | No |
Precision | |
Scale | |
Status | Active |
Description |
The time (local time) on the date in which a sample began to be collected. |
General Data Type | DATE |
Unit of Measure | |
Case Restriction | |
Display Example | |
Format Mask | mm/dd/yyyy hh24:mi |
Null Value | |
Null Value Meaning | |
Allowed Values | As provided |
Default Value | |
Foreign Key Relations | |
Derivation | |
Validation Rules |
Attribute Name | Sampling End Time |
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Seq. Order | 7 |
Data Storage Type | DATE |
Max Length | |
Min Length | |
Required | No |
Primary Key | No |
Precision | |
Scale | |
Status | Active |
Description |
The time (local time) on the date in which a sample was finished being collected. |
General Data Type | DATE |
Unit of Measure | |
Case Restriction | |
Display Example | |
Format Mask | mm/dd/yyyy hh24:mi |
Null Value | |
Null Value Meaning | |
Allowed Values | As provided |
Default Value | |
Foreign Key Relations | |
Derivation | |
Validation Rules |
Attribute Name | Latitude |
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Seq. Order | 8 |
Data Storage Type | NUMBER |
Max Length | |
Min Length | |
Required | No |
Primary Key | No |
Precision | |
Scale | |
Status | Active |
Description |
The latitude of the sampling station in decmal degrees. Units for values are decimal degrees. |
General Data Type | NUMBER |
Unit of Measure | decimal degrees |
Case Restriction | |
Display Example | |
Format Mask | |
Null Value | |
Null Value Meaning | |
Allowed Values | As provided |
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Validation Rules |
Attribute Name | Longitude |
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Seq. Order | 9 |
Data Storage Type | NUMBER |
Max Length | |
Min Length | |
Required | No |
Primary Key | No |
Precision | |
Scale | |
Status | Active |
Description |
The longitude of the sampling station in decimal degrees. Units for values are decimal degrees. |
General Data Type | NUMBER |
Unit of Measure | decimal degrees |
Case Restriction | |
Display Example | |
Format Mask | |
Null Value | |
Null Value Meaning | |
Allowed Values | As provided |
Default Value | |
Foreign Key Relations | |
Derivation | |
Validation Rules |
Attribute Name | Station Depth (m) |
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Seq. Order | 10 |
Data Storage Type | NUMBER |
Max Length | |
Min Length | |
Required | No |
Primary Key | No |
Precision | |
Scale | |
Status | Active |
Description |
The water depth at a given station. Units for values are meters. |
General Data Type | NUMBER |
Unit of Measure | meters |
Case Restriction | |
Display Example | |
Format Mask | |
Null Value | |
Null Value Meaning | |
Allowed Values | As provided |
Default Value | |
Foreign Key Relations | |
Derivation | |
Validation Rules |
Attribute Name | CastNum |
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Seq. Order | 11 |
Data Storage Type | NUMBER |
Max Length | |
Min Length | |
Required | No |
Primary Key | No |
Precision | |
Scale | |
Status | Active |
Description |
The number of the CTD cast performed on a specific date. |
General Data Type | NUMBER |
Unit of Measure | |
Case Restriction | |
Display Example | |
Format Mask | |
Null Value | |
Null Value Meaning | |
Allowed Values | As provided |
Default Value | |
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Derivation | |
Validation Rules |
Attribute Name | Depth(m) |
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Seq. Order | 12 |
Data Storage Type | NUMBER |
Max Length | |
Min Length | |
Required | No |
Primary Key | No |
Precision | |
Scale | |
Status | Active |
Description |
The depth at which the data were collected. Units for values are meters. |
General Data Type | NUMBER |
Unit of Measure | meters |
Case Restriction | |
Display Example | |
Format Mask | |
Null Value | |
Null Value Meaning | |
Allowed Values | As provided |
Default Value | |
Foreign Key Relations | |
Derivation | |
Validation Rules |
Attribute Name | Pr(db) |
---|---|
Seq. Order | 13 |
Data Storage Type | NUMBER |
Max Length | |
Min Length | |
Required | No |
Primary Key | No |
Precision | |
Scale | |
Status | Active |
Description |
The pressure reading at which the data were collected. Units for values are decibars. |
General Data Type | NUMBER |
Unit of Measure | decibars |
Case Restriction | |
Display Example | |
Format Mask | |
Null Value | |
Null Value Meaning | |
Allowed Values | As provided |
Default Value | |
Foreign Key Relations | |
Derivation | |
Validation Rules |
Attribute Name | dm |
---|---|
Seq. Order | 14 |
Data Storage Type | NUMBER |
Max Length | |
Min Length | |
Required | No |
Primary Key | No |
Precision | |
Scale | |
Status | Active |
Description |
A relative measurement of the depth at which the samples were collected using a specified reference depth. Units for values are meters. |
General Data Type | NUMBER |
Unit of Measure | meters |
Case Restriction | |
Display Example | |
Format Mask | |
Null Value | |
Null Value Meaning | |
Allowed Values | As provided |
Default Value | |
Foreign Key Relations | |
Derivation | |
Validation Rules |
Attribute Name | scans |
---|---|
Seq. Order | 15 |
Data Storage Type | NUMBER |
Max Length | |
Min Length | |
Required | No |
Primary Key | No |
Precision | |
Scale | |
Status | Active |
Description |
The number of data scans that were averaged to determine the data value for a given depth bin. |
General Data Type | NUMBER |
Unit of Measure | |
Case Restriction | |
Display Example | |
Format Mask | |
Null Value | |
Null Value Meaning | |
Allowed Values | As provided |
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Validation Rules |
Attribute Name | FL |
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Seq. Order | 16 |
Data Storage Type | NUMBER |
Max Length | |
Min Length | |
Required | No |
Primary Key | No |
Precision | |
Scale | |
Status | Active |
Description |
The fluorescence reading from the chlorophyll fluourometer. Units for values are volts. |
General Data Type | NUMBER |
Unit of Measure | volts |
Case Restriction | |
Display Example | |
Format Mask | |
Null Value | |
Null Value Meaning | |
Allowed Values | 0-5 |
Default Value | |
Foreign Key Relations | |
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Validation Rules |
Attribute Name | Calib_Chl_a |
---|---|
Seq. Order | 17 |
Data Storage Type | NUMBER |
Max Length | |
Min Length | |
Required | No |
Primary Key | No |
Precision | |
Scale | |
Status | Active |
Description |
Chlorophyll a values determined using the equation of a line derived from a regression of extracted chlorphyll a analyses and fluorometer voltage. |
General Data Type | NUMBER |
Unit of Measure | |
Case Restriction | |
Display Example | |
Format Mask | |
Null Value | |
Null Value Meaning | |
Allowed Values | less than the limit of detection to the measured value |
Default Value | |
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Validation Rules |
Attribute Name | T |
---|---|
Seq. Order | 18 |
Data Storage Type | NUMBER |
Max Length | |
Min Length | |
Required | No |
Primary Key | No |
Precision | |
Scale | |
Status | Active |
Description |
Water temperature. Units for values are degrees celsius. |
General Data Type | NUMBER |
Unit of Measure | degrees celsius |
Case Restriction | |
Display Example | |
Format Mask | |
Null Value | |
Null Value Meaning | |
Allowed Values | zero to measured value |
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Validation Rules |
Attribute Name | S |
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Seq. Order | 19 |
Data Storage Type | NUMBER |
Max Length | |
Min Length | |
Required | No |
Primary Key | No |
Precision | |
Scale | |
Status | Active |
Description |
Seawater salinity. Units for values are unitless. |
General Data Type | NUMBER |
Unit of Measure | unitless |
Case Restriction | |
Display Example | |
Format Mask | |
Null Value | |
Null Value Meaning | |
Allowed Values | zero to measured value |
Default Value | |
Foreign Key Relations | |
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Validation Rules |
Attribute Name | Cond |
---|---|
Seq. Order | 20 |
Data Storage Type | NUMBER |
Max Length | |
Min Length | |
Required | No |
Primary Key | No |
Precision | |
Scale | |
Status | Active |
Description |
Seawater conductivity. Units for values are microsiemens per centimeter. |
General Data Type | NUMBER |
Unit of Measure | microsiemens per centimeter |
Case Restriction | |
Display Example | |
Format Mask | |
Null Value | |
Null Value Meaning | |
Allowed Values | zero to measured value |
Default Value | |
Foreign Key Relations | |
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Validation Rules |
Attribute Name | ST |
---|---|
Seq. Order | 21 |
Data Storage Type | NUMBER |
Max Length | |
Min Length | |
Required | No |
Primary Key | No |
Precision | |
Scale | |
Status | Active |
Description |
Seawater density. Units for values are Sigma-t units_kilograms per cubic meter. |
General Data Type | NUMBER |
Unit of Measure | Sigma-t units_kilograms per cubic meter |
Case Restriction | |
Display Example | |
Format Mask | |
Null Value | |
Null Value Meaning | |
Allowed Values | zero to measured value |
Default Value | |
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Catalog Details
Catalog Item ID | 36788 |
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Metadata Record Created By | Jeffrey W Cowen |
Metadata Record Created | 2017-02-13 16:57+0000 |
Metadata Record Last Modified By | SysAdmin InPortAdmin |
» Metadata Record Last Modified | 2022-08-09 17:11+0000 |
Metadata Record Published | 2018-02-27 |
Owner Org | NWFSC |
Metadata Publication Status | Published Externally |
Do Not Publish? | N |
Metadata Workflow State | Published / External |
Metadata Last Review Date | 2018-02-27 |
Metadata Review Frequency | 1 Year |
Metadata Next Review Date | 2019-02-27 |
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