LCREP genetic stock ID - Lower Columbia River Ecosystem Monitoring Project
Data Set (DS) | Northwest Fisheries Science Center (NWFSC)GUID: gov.noaa.nmfs.inport:17832 | Updated: August 9, 2022 | Published / External
Summary
Short Citation
Northwest Fisheries Science Center, 2024: LCREP genetic stock ID - Lower Columbia River Ecosystem Monitoring Project, https://www.fisheries.noaa.gov/inport/item/17832.
Full Citation Examples
1) The purpose of this project is to document juvenile salmon habitat occurrence in the Lower Columbia River and estuary, and examine how habitat conditions influence their distribution, health, and abundance. We also want to monitor habitat conditions and indicators of salmon health in these environments. Parameters measured include habitat conditions such as vegetation, water temperature, and dissolved oxygen; salmon diet and prey availability; weight, length, growth rate, lipid content, genetic stock, and chemical contaminant exposure.
2) Lyndal Johnson (NFWSC FTE) is the project lead, and other primary staff involved are Sean Sol and Paul Olson (NWFSC FTEs) and Kate Macneale (NWFSC term employee), but the project also involves other NWFSC FTEs, other term employees, contractors, and staff from other programs (Environmental Chemistry) and Divisions (FE, CB), as well as staff from collaborating agencies (i.e, the Lower Columbia River Estuary Partnership, USGS, PNNL, OHSU).
3) The project involves field surveys in which parameters measured include habitat conditions such as vegetation, water temperature, and dissolved oxygen; salmon diet and prey availability; weight, length, growth rate, lipid content, genetic stock, and chemical contaminant exposure.
4) Specific products include annual reports for the Lower Columbia Estuary Partnership, and manuscripts in peer-reviewed journals.
5) Specific audiences include (but are not limited to) the Bonneville Power Administration and other federal, state, and local agencies involved with salmon recovery and environmental management in the Columbia Basin (e.g., EPA, Washington Department of Ecology, Oregon Department of Environmental Quality, the City of Portland); the NMFS regional office, and other agency and academic scientists.
6) This is a stand-alone project, but it is also a component of a larger monitoring program overseen by the Estuary Partnership in which other tasks are conducted by collaborators in USGS, PNNL, and OHSU.
7) This is an ongoing project with a soft completion deadline; however, there are no final deadlines with specific tasks to be completed on a yearly basis.
Genetic stock information for chinook salmon from Lower Columbia River sites.
Distribution Information
-
http://www.ncei.noaa.gov
Data are housed in password protected databases behind a firewall.
Child Items
No Child Items for this record.
Contact Information
Point of Contact
Jennie L Bolton
Jennie.Bolton@noaa.gov
206-860-3359
Metadata Contact
Metadata Contact
nmfs.nwfsc.metadata@noaa.gov
(206) 860-3433
Extents
-122.3062° W,
-122.3062° E,
47.6449° N,
47.6449° S
Welch Island: Welch Island, Lower Columbia River and Estuary
2010-04-01 - Present
Item Identification
Title: | LCREP genetic stock ID - Lower Columbia River Ecosystem Monitoring Project |
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Short Name: | LCREP genetic stock ID (Lower Columbia River Ecosystem Monitoring Project) |
Status: | In Work |
Abstract: |
1) The purpose of this project is to document juvenile salmon habitat occurrence in the Lower Columbia River and estuary, and examine how habitat conditions influence their distribution, health, and abundance. We also want to monitor habitat conditions and indicators of salmon health in these environments. Parameters measured include habitat conditions such as vegetation, water temperature, and dissolved oxygen; salmon diet and prey availability; weight, length, growth rate, lipid content, genetic stock, and chemical contaminant exposure. 2) Lyndal Johnson (NFWSC FTE) is the project lead, and other primary staff involved are Sean Sol and Paul Olson (NWFSC FTEs) and Kate Macneale (NWFSC term employee), but the project also involves other NWFSC FTEs, other term employees, contractors, and staff from other programs (Environmental Chemistry) and Divisions (FE, CB), as well as staff from collaborating agencies (i.e, the Lower Columbia River Estuary Partnership, USGS, PNNL, OHSU). 3) The project involves field surveys in which parameters measured include habitat conditions such as vegetation, water temperature, and dissolved oxygen; salmon diet and prey availability; weight, length, growth rate, lipid content, genetic stock, and chemical contaminant exposure. 4) Specific products include annual reports for the Lower Columbia Estuary Partnership, and manuscripts in peer-reviewed journals. 5) Specific audiences include (but are not limited to) the Bonneville Power Administration and other federal, state, and local agencies involved with salmon recovery and environmental management in the Columbia Basin (e.g., EPA, Washington Department of Ecology, Oregon Department of Environmental Quality, the City of Portland); the NMFS regional office, and other agency and academic scientists. 6) This is a stand-alone project, but it is also a component of a larger monitoring program overseen by the Estuary Partnership in which other tasks are conducted by collaborators in USGS, PNNL, and OHSU. 7) This is an ongoing project with a soft completion deadline; however, there are no final deadlines with specific tasks to be completed on a yearly basis. Genetic stock information for chinook salmon from Lower Columbia River sites. |
Purpose: |
Addresses Legal Mandate Laboratory data |
Notes: |
Loaded by batch 4121, 01-23-2013 17:06 |
Supplemental Information: |
These data are available to the public Peer Reviewed Publication: PBDEs in juvenile chinook salmon from the lower Columbia River and estuary and Puget Sound Peer Reviewed Publication: Persistent Organic Pollutants in Juvenile Chinook Salmon in the Columbia Basin: Implications for Stock Recovery. Peer Reviewed Publication: Polycyclic aromatic hydrocarbons and risk to threatened and endangered Chinook salmon in the Lower Columbia River estuary. Peer Reviewed Publication: Contaminant Exposure in Juvenile Salmon from Columbia River Hatcheries. Report: Lower Columbia River Ecosystem Monitoring Water Quality and Salmon Report Report: Lower Columbia River Ecosystem Monitoring Program (Annual Reports, years 3-7.) |
Keywords
Theme Keywords
Thesaurus | Keyword |
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UNCONTROLLED | |
PARR Exclusion | Non-NOAA Funded |
None | chemical contaminants |
None | chinook salmon |
None | chinook salmon growth rates |
None | chum salmon |
None | coho salmon |
None | fish community composition |
None | fish diet |
None | Genotype |
None | salmon lipid content |
None | salmon prey availability |
Spatial Keywords
Thesaurus | Keyword |
---|---|
UNCONTROLLED | |
None | Lower Columbia River |
Physical Location
Organization: | Northwest Fisheries Science Center |
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City: | Seattle |
State/Province: | WA |
Country: | USA |
Data Set Information
Data Set Scope Code: | Data Set |
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Data Presentation Form: | Other |
Support Roles
Data Steward
Date Effective From: | 2015-10-01 |
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Date Effective To: | |
Contact (Person): | Johnson, Lyndal L |
Address: |
2725 Montlake Boulevard East Seattle, WA 98112 |
Email Address: | Lyndal.L.Johnson@noaa.gov |
Phone: | 206-860-3345 |
Distributor
Date Effective From: | 2015-10-01 |
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Date Effective To: | |
Contact (Organization): | Northwest Fisheries Science Center (NWFSC) |
Address: |
2725 Montlake Boulevard East Seattle, WA 98112 USA |
Email Address: | nmfs.nwfsc.metadata@noaa.gov |
Phone: | 206-860-3200 |
URL: | NWFSC Home |
Metadata Contact
Date Effective From: | 2015-10-01 |
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Date Effective To: | |
Contact (Person): | Contact, Metadata |
Address: |
2725 Montlake Boulevard East Seattle, WA 98112 USA |
Email Address: | nmfs.nwfsc.metadata@noaa.gov |
Phone: | (206) 860-3433 |
Originator
Date Effective From: | 2015-10-01 |
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Date Effective To: | |
Contact (Person): | Johnson, Lyndal L |
Address: |
2725 Montlake Boulevard East Seattle, WA 98112 |
Email Address: | Lyndal.L.Johnson@noaa.gov |
Phone: | 206-860-3345 |
Point of Contact
Date Effective From: | 2015-10-01 |
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Date Effective To: | |
Contact (Person): | Bolton, Jennie L |
Address: |
2725 Montlake Boulevard East Seattle, WA 98112 |
Email Address: | Jennie.Bolton@noaa.gov |
Phone: | 206-860-3359 |
Fax: | 206-860-3335 |
Extents
Extent Group 1
Extent Group 1 / Geographic Area 1
W° Bound: | -122.3062 | |
---|---|---|
E° Bound: | -122.3062 | |
N° Bound: | 47.6449 | |
S° Bound: | 47.6449 | |
Description |
Welch Island: Welch Island, Lower Columbia River and Estuary |
Extent Group 1 / Time Frame 1
Time Frame Type: | Continuing |
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Start: | 2010-04-01 |
Extent Group 2
Extent Group 2 / Geographic Area 1
W° Bound: | -123.515 | |
---|---|---|
E° Bound: | -123.515 | |
N° Bound: | 46.2525 | |
S° Bound: | 46.2525 | |
Description |
Iwaco Slough: Ilwaco Slough, Lower Columbia River and Estuary |
Extent Group 3
Extent Group 3 / Geographic Area 1
W° Bound: | -122.3062 | |
---|---|---|
E° Bound: | -122.3062 | |
N° Bound: | 47.6449 | |
S° Bound: | 47.6449 | |
Description |
Campbell Slough: Campbell Slough, Lower Columbia River and Estuary |
Extent Group 4
Extent Group 4 / Geographic Area 1
W° Bound: | -122.3062 | |
---|---|---|
E° Bound: | -122.3062 | |
N° Bound: | 47.6449 | |
S° Bound: | 47.6449 | |
Description |
Franz Lake: Franz Lake, Lower Columbia River and Estuary |
Extent Group 5
Extent Group 5 / Geographic Area 1
W° Bound: | -122.3062 | |
---|---|---|
E° Bound: | -122.3062 | |
N° Bound: | 47.6449 | |
S° Bound: | 47.6449 | |
Description |
Whites Island: Whites Island, Lower Columbia River and Estuary |
Access Information
Security Class: | Sensitive |
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Data Access Procedure: |
At this time, contact the Data Manager for information on obtaining access to this data set. In the near future, the NWFSC will strive to provide all non-sensitive data resources as a web service in order to meet the NOAA Data Access Policy Directive (https://nosc.noaa.gov/EDMC/PD.DA.php). |
Data Access Constraints: |
Data are housed in password protected databases behind a firewall. |
Distribution Information
Distribution 1
Download URL: | http://www.ncei.noaa.gov |
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Distributor: | |
Description: |
http://www.ncei.noaa.gov |
Technical Environment
Description: |
Spreadsheet |
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Data Quality
Accuracy: |
Medium |
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Quality Control Procedures Employed: |
These data were collected and processed in accordance with established protocols and best practices under the direction of the projects Principal Investigator. Contact the dataset Data Manager in section 3 for full QA/QC methodology. |
Data Management
Have Resources for Management of these Data Been Identified?: | Yes |
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Approximate Percentage of Budget for these Data Devoted to Data Management: | 5% |
Do these Data Comply with the Data Access Directive?: | Yes |
Is Access to the Data Limited Based on an Approved Waiver?: | No |
If Distributor (Data Hosting Service) is Needed, Please Indicate: | No |
Approximate Delay Between Data Collection and Dissemination: | 360 days |
If Delay is Longer than Latency of Automated Processing, Indicate Under What Authority Data Access is Delayed: |
No Delay |
Actual or Planned Long-Term Data Archive Location: | No Archiving Intended |
If To Be Determined, Unable to Archive, or No Archiving Intended, Explain: |
NA |
Approximate Delay Between Data Collection and Archiving: | 365 days |
How Will the Data Be Protected from Accidental or Malicious Modification or Deletion Prior to Receipt by the Archive?: |
The Northwest Fisheries Science Center facilitates backup and recovery of all data and IT components which are managed by IT Operations through the capture of static (point-in-time) backup data to physical media. Once data is captured to physical media (every 1-3 days), a duplicate is made and routinely (weekly) transported to an offsite archive facility where it is maintained throughout the data's applicable life-cycle. |
Lineage
Lineage Statement: |
These data were collected and processed in accordance with established protocols and best practices under the direction of the projects Principal Investigator. Contact the dataset Data Manager in section 3 for full QA/QC methodology. |
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Sources
NWFSC Annual Project Planning System
Citation URL: | http://www.webapps.nwfsc.noaa.gov/11427 |
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Catalog Details
Catalog Item ID: | 17832 |
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GUID: | gov.noaa.nmfs.inport:17832 |
Metadata Record Created By: | Jeffrey W Cowen |
Metadata Record Created: | 2013-01-23 17:06+0000 |
Metadata Record Last Modified By: | SysAdmin InPortAdmin |
Metadata Record Last Modified: | 2022-08-09 17:11+0000 |
Metadata Record Published: | 2016-02-29 |
Owner Org: | NWFSC |
Metadata Publication Status: | Published Externally |
Do Not Publish?: | N |
Metadata Last Review Date: | 2016-02-29 |
Metadata Review Frequency: | 1 Year |
Metadata Next Review Date: | 2017-02-28 |