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Summary
Item Identification
Keywords
Physical Location
Data Set Info
Support Roles
Extents
Access Info
Distribution Info
Tech Environment
Data Quality
Data Management
Lineage
Catalog Details

Summary

Short Citation
Northwest Fisheries Science Center, 2024: LCREP genetic stock ID - Lower Columbia River Ecosystem Monitoring Project, https://www.fisheries.noaa.gov/inport/item/17832.
Full Citation Examples

Abstract

1) The purpose of this project is to document juvenile salmon habitat occurrence in the Lower Columbia River and estuary, and examine how habitat conditions influence their distribution, health, and abundance. We also want to monitor habitat conditions and indicators of salmon health in these environments. Parameters measured include habitat conditions such as vegetation, water temperature, and dissolved oxygen; salmon diet and prey availability; weight, length, growth rate, lipid content, genetic stock, and chemical contaminant exposure.

2) Lyndal Johnson (NFWSC FTE) is the project lead, and other primary staff involved are Sean Sol and Paul Olson (NWFSC FTEs) and Kate Macneale (NWFSC term employee), but the project also involves other NWFSC FTEs, other term employees, contractors, and staff from other programs (Environmental Chemistry) and Divisions (FE, CB), as well as staff from collaborating agencies (i.e, the Lower Columbia River Estuary Partnership, USGS, PNNL, OHSU).

3) The project involves field surveys in which parameters measured include habitat conditions such as vegetation, water temperature, and dissolved oxygen; salmon diet and prey availability; weight, length, growth rate, lipid content, genetic stock, and chemical contaminant exposure.

4) Specific products include annual reports for the Lower Columbia Estuary Partnership, and manuscripts in peer-reviewed journals.

5) Specific audiences include (but are not limited to) the Bonneville Power Administration and other federal, state, and local agencies involved with salmon recovery and environmental management in the Columbia Basin (e.g., EPA, Washington Department of Ecology, Oregon Department of Environmental Quality, the City of Portland); the NMFS regional office, and other agency and academic scientists.

6) This is a stand-alone project, but it is also a component of a larger monitoring program overseen by the Estuary Partnership in which other tasks are conducted by collaborators in USGS, PNNL, and OHSU.

7) This is an ongoing project with a soft completion deadline; however, there are no final deadlines with specific tasks to be completed on a yearly basis.

Genetic stock information for chinook salmon from Lower Columbia River sites.

Distribution Information

Access Constraints:

Data are housed in password protected databases behind a firewall.

Child Items

No Child Items for this record.

Contact Information

Point of Contact
Jennie L Bolton
Jennie.Bolton@noaa.gov
206-860-3359

Metadata Contact
Metadata Contact
nmfs.nwfsc.metadata@noaa.gov
(206) 860-3433

Extents

Geographic Area 1

-122.3062° W, -122.3062° E, 47.6449° N, 47.6449° S

Welch Island: Welch Island, Lower Columbia River and Estuary

Time Frame 1
2010-04-01 - Present

Item Identification

Title: LCREP genetic stock ID - Lower Columbia River Ecosystem Monitoring Project
Short Name: LCREP genetic stock ID (Lower Columbia River Ecosystem Monitoring Project)
Status: In Work
Abstract:

1) The purpose of this project is to document juvenile salmon habitat occurrence in the Lower Columbia River and estuary, and examine how habitat conditions influence their distribution, health, and abundance. We also want to monitor habitat conditions and indicators of salmon health in these environments. Parameters measured include habitat conditions such as vegetation, water temperature, and dissolved oxygen; salmon diet and prey availability; weight, length, growth rate, lipid content, genetic stock, and chemical contaminant exposure.

2) Lyndal Johnson (NFWSC FTE) is the project lead, and other primary staff involved are Sean Sol and Paul Olson (NWFSC FTEs) and Kate Macneale (NWFSC term employee), but the project also involves other NWFSC FTEs, other term employees, contractors, and staff from other programs (Environmental Chemistry) and Divisions (FE, CB), as well as staff from collaborating agencies (i.e, the Lower Columbia River Estuary Partnership, USGS, PNNL, OHSU).

3) The project involves field surveys in which parameters measured include habitat conditions such as vegetation, water temperature, and dissolved oxygen; salmon diet and prey availability; weight, length, growth rate, lipid content, genetic stock, and chemical contaminant exposure.

4) Specific products include annual reports for the Lower Columbia Estuary Partnership, and manuscripts in peer-reviewed journals.

5) Specific audiences include (but are not limited to) the Bonneville Power Administration and other federal, state, and local agencies involved with salmon recovery and environmental management in the Columbia Basin (e.g., EPA, Washington Department of Ecology, Oregon Department of Environmental Quality, the City of Portland); the NMFS regional office, and other agency and academic scientists.

6) This is a stand-alone project, but it is also a component of a larger monitoring program overseen by the Estuary Partnership in which other tasks are conducted by collaborators in USGS, PNNL, and OHSU.

7) This is an ongoing project with a soft completion deadline; however, there are no final deadlines with specific tasks to be completed on a yearly basis.

Genetic stock information for chinook salmon from Lower Columbia River sites.

Purpose:

Addresses Legal Mandate

Laboratory data

Notes:

Loaded by batch 4121, 01-23-2013 17:06

Supplemental Information:

These data are available to the public

Peer Reviewed Publication: PBDEs in juvenile chinook salmon from the lower Columbia River and estuary and Puget Sound

Peer Reviewed Publication: Persistent Organic Pollutants in Juvenile Chinook Salmon in the Columbia Basin: Implications for Stock Recovery.

Peer Reviewed Publication: Polycyclic aromatic hydrocarbons and risk to threatened and endangered Chinook salmon in the Lower Columbia River estuary.

Peer Reviewed Publication: Contaminant Exposure in Juvenile Salmon from Columbia River Hatcheries.

Report: Lower Columbia River Ecosystem Monitoring Water Quality and Salmon Report

Report: Lower Columbia River Ecosystem Monitoring Program (Annual Reports, years 3-7.)

Keywords

Theme Keywords

Thesaurus Keyword
UNCONTROLLED
PARR Exclusion Non-NOAA Funded
None chemical contaminants
None chinook salmon
None chinook salmon growth rates
None chum salmon
None coho salmon
None fish community composition
None fish diet
None Genotype
None salmon lipid content
None salmon prey availability

Spatial Keywords

Thesaurus Keyword
UNCONTROLLED
None Lower Columbia River

Physical Location

Organization: Northwest Fisheries Science Center
City: Seattle
State/Province: WA
Country: USA

Data Set Information

Data Set Scope Code: Data Set
Data Presentation Form: Other

Support Roles

Data Steward

CC ID: 297931
Date Effective From: 2015-10-01
Date Effective To:
Contact (Person): Johnson, Lyndal L
Address: 2725 Montlake Boulevard East
Seattle, WA 98112
Email Address: Lyndal.L.Johnson@noaa.gov
Phone: 206-860-3345

Distributor

CC ID: 297932
Date Effective From: 2015-10-01
Date Effective To:
Contact (Organization): Northwest Fisheries Science Center (NWFSC)
Address: 2725 Montlake Boulevard East
Seattle, WA 98112
USA
Email Address: nmfs.nwfsc.metadata@noaa.gov
Phone: 206-860-3200
URL: NWFSC Home

Metadata Contact

CC ID: 297930
Date Effective From: 2015-10-01
Date Effective To:
Contact (Person): Contact, Metadata
Address: 2725 Montlake Boulevard East
Seattle, WA 98112
USA
Email Address: nmfs.nwfsc.metadata@noaa.gov
Phone: (206) 860-3433

Originator

CC ID: 297934
Date Effective From: 2015-10-01
Date Effective To:
Contact (Person): Johnson, Lyndal L
Address: 2725 Montlake Boulevard East
Seattle, WA 98112
Email Address: Lyndal.L.Johnson@noaa.gov
Phone: 206-860-3345

Point of Contact

CC ID: 297933
Date Effective From: 2015-10-01
Date Effective To:
Contact (Person): Bolton, Jennie L
Address: 2725 Montlake Boulevard East
Seattle, WA 98112
Email Address: Jennie.Bolton@noaa.gov
Phone: 206-860-3359
Fax: 206-860-3335

Extents

Extent Group 1

Extent Group 1 / Geographic Area 1

CC ID: 297937
W° Bound: -122.3062
E° Bound: -122.3062
N° Bound: 47.6449
S° Bound: 47.6449
Description

Welch Island: Welch Island, Lower Columbia River and Estuary

Extent Group 1 / Time Frame 1

CC ID: 297936
Time Frame Type: Continuing
Start: 2010-04-01

Extent Group 2

Extent Group 2 / Geographic Area 1

CC ID: 297939
W° Bound: -123.515
E° Bound: -123.515
N° Bound: 46.2525
S° Bound: 46.2525
Description

Iwaco Slough: Ilwaco Slough, Lower Columbia River and Estuary

Extent Group 3

Extent Group 3 / Geographic Area 1

CC ID: 297941
W° Bound: -122.3062
E° Bound: -122.3062
N° Bound: 47.6449
S° Bound: 47.6449
Description

Campbell Slough: Campbell Slough, Lower Columbia River and Estuary

Extent Group 4

Extent Group 4 / Geographic Area 1

CC ID: 297943
W° Bound: -122.3062
E° Bound: -122.3062
N° Bound: 47.6449
S° Bound: 47.6449
Description

Franz Lake: Franz Lake, Lower Columbia River and Estuary

Extent Group 5

Extent Group 5 / Geographic Area 1

CC ID: 297945
W° Bound: -122.3062
E° Bound: -122.3062
N° Bound: 47.6449
S° Bound: 47.6449
Description

Whites Island: Whites Island, Lower Columbia River and Estuary

Access Information

Security Class: Sensitive
Data Access Procedure:

At this time, contact the Data Manager for information on obtaining access to this data set. In the near future, the NWFSC will strive to provide all non-sensitive data resources as a web service in order to meet the NOAA Data Access Policy Directive (https://nosc.noaa.gov/EDMC/PD.DA.php).

Data Access Constraints:

Data are housed in password protected databases behind a firewall.

Distribution Information

Distribution 1

CC ID: 297947
Download URL: http://www.ncei.noaa.gov
Distributor:
Description:

http://www.ncei.noaa.gov

Technical Environment

Description:

Spreadsheet

Data Quality

Accuracy:

Medium

Quality Control Procedures Employed:

These data were collected and processed in accordance with established protocols and best practices under the direction of the projects Principal Investigator. Contact the dataset Data Manager in section 3 for full QA/QC methodology.

Data Management

Have Resources for Management of these Data Been Identified?: Yes
Approximate Percentage of Budget for these Data Devoted to Data Management: 5%
Do these Data Comply with the Data Access Directive?: Yes
Is Access to the Data Limited Based on an Approved Waiver?: No
If Distributor (Data Hosting Service) is Needed, Please Indicate: No
Approximate Delay Between Data Collection and Dissemination: 360 days
If Delay is Longer than Latency of Automated Processing, Indicate Under What Authority Data Access is Delayed:

No Delay

Actual or Planned Long-Term Data Archive Location: No Archiving Intended
If To Be Determined, Unable to Archive, or No Archiving Intended, Explain:

NA

Approximate Delay Between Data Collection and Archiving: 365 days
How Will the Data Be Protected from Accidental or Malicious Modification or Deletion Prior to Receipt by the Archive?:

The Northwest Fisheries Science Center facilitates backup and recovery of all data and IT components which are managed by IT Operations through the capture of static (point-in-time) backup data to physical media. Once data is captured to physical media (every 1-3 days), a duplicate is made and routinely (weekly) transported to an offsite archive facility where it is maintained throughout the data's applicable life-cycle.

Lineage

Lineage Statement:

These data were collected and processed in accordance with established protocols and best practices under the direction of the projects Principal Investigator. Contact the dataset Data Manager in section 3 for full QA/QC methodology.

Sources

NWFSC Annual Project Planning System

CC ID: 297946
Citation URL: http://www.webapps.nwfsc.noaa.gov/11427

Catalog Details

Catalog Item ID: 17832
GUID: gov.noaa.nmfs.inport:17832
Metadata Record Created By: Jeffrey W Cowen
Metadata Record Created: 2013-01-23 17:06+0000
Metadata Record Last Modified By: SysAdmin InPortAdmin
Metadata Record Last Modified: 2022-08-09 17:11+0000
Metadata Record Published: 2016-02-29
Owner Org: NWFSC
Metadata Publication Status: Published Externally
Do Not Publish?: N
Metadata Last Review Date: 2016-02-29
Metadata Review Frequency: 1 Year
Metadata Next Review Date: 2017-02-28