Vibrio ecology - Identifying Environmental Determinants Favorable for the Presence and Transmission of Pathogenic Vibrios
Data Set (DS) | Northwest Fisheries Science Center (NWFSC)GUID: gov.noaa.nmfs.inport:17945 | Updated: March 4, 2026 | Published / External
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Summary
Short Citation
Northwest Fisheries Science Center, 2026: Vibrio ecology - Identifying Environmental Determinants Favorable for the Presence and Transmission of Pathogenic Vibrios, https://www.fisheries.noaa.gov/inport/item/17945.
Full Citation Examples
In a tri-coastal collaborative study, the population densities of vibrios are being determined in the Mississippi Sound, Puget Sound, Chesapeake Bay, and Timbalier Bay. Sea surface temperature (SST), salinity, pigments (including chlorophylls, fucoxanthins, and others), dissolved organic carbon, and suspended particulate matter will be measured and evaluated as predictors of vibrio densities in the context of multiple regression analysis.
Concentrations of Vibrio parahaemolyticus in oysters, water and sediments. Temperature, salinity, chlorophyll, SPM, DOC and pigment analysis.
Raw/field data, Monitoring or sensor data, Time series (of types 1-3), Laboratory data
Data Access & Downloads
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Identifying environmental determinants favorable for the presence and transmission of pathogenic vibrios.
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Identifying environmental determinants favorable for the presence and transmission of pathogenic vibrios.
NA
URLs
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NWFSC Dataset Information page. Concentrations of Vibrio parahaemolyticus in oysters, water and sediments. Temperature, salinity, chlorophyll, SPM, DOC and pigment analysis
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Concentrations of Vibrio parahaemolyticus in oysters, water and sediments. Temperature, salinity, chlorophyll, SPM, DOC and pigment analysis
Child Items
No Child Items for this record.
Contact Information
Point of Contact
Rohinee N Paranjpye
Rohinee.Paranjpye@noaa.gov
206-860-3421
Metadata Contact
Northwest Fisheries Science Center (NWFSC)
ROR: 05r7z1k40
nmfs.nwfsc.metadata@noaa.gov
206-860-3200
NWFSC Home
Extents
-122.9462° W,
-122.9462° E,
47.1785° N,
47.1785° S
Totten Inlet: Totten Inlet, WA
2009-05-01 - 2012-12-31
Item Identification
| Title: | Vibrio ecology - Identifying Environmental Determinants Favorable for the Presence and Transmission of Pathogenic Vibrios |
|---|---|
| Short Name: | Vibrio ecology (Identifying Environmental Determinants Favorable for the Presence and Transmission of Pathogenic Vibrios) |
| Status: | In Work |
| Creation Date: | 2009-01-15 |
| Publication Date: | 2019-05-23 |
| Abstract: |
In a tri-coastal collaborative study, the population densities of vibrios are being determined in the Mississippi Sound, Puget Sound, Chesapeake Bay, and Timbalier Bay. Sea surface temperature (SST), salinity, pigments (including chlorophylls, fucoxanthins, and others), dissolved organic carbon, and suspended particulate matter will be measured and evaluated as predictors of vibrio densities in the context of multiple regression analysis. Concentrations of Vibrio parahaemolyticus in oysters, water and sediments. Temperature, salinity, chlorophyll, SPM, DOC and pigment analysis. |
| Purpose: |
Raw/field data, Monitoring or sensor data, Time series (of types 1-3), Laboratory data |
| Notes: |
Loaded by batch 4228, 01-29-2013 18:04 |
| Supplemental Information: |
Subject to Public Access to Research Results (PARR): Yes Peer Reviewed Publication: complete joint manuscript. manuscript |
Keywords
Theme Keywords
| Thesaurus | Keyword |
|---|---|
| UNCONTROLLED | |
| None | pathogen |
| None | seafood safety |
| None | Vibrio |
Spatial Keywords
| Thesaurus | Keyword |
|---|---|
| UNCONTROLLED | |
| None | NWFSC Montlake |
| None | Point Julia |
| None | Totten Inlet |
Instrument Keywords
| Thesaurus | Keyword |
|---|---|
| UNCONTROLLED | |
| None | Instrument Not Applicable |
Physical Location
| Organization: | Northwest Fisheries Science Center |
|---|---|
| City: | Seattle |
| State/Province: | WA |
| Country: | USA |
Data Set Information
| Data Set Scope Code: | Data Set |
|---|---|
| Data Set Type: | Spreadsheet |
| Data Presentation Form: | Table (digital) |
Support Roles
Data Steward
| Date Effective From: | 2015-10-01 |
|---|---|
| Date Effective To: | |
| Contact (Person): | Paranjpye, Rohinee N |
| Address: |
2725 Montlake Blvd East Seattle, WA 98112 |
| Email Address: | Rohinee.Paranjpye@noaa.gov |
| Phone: | 206-860-3421 |
| Fax: | 206-860-3467 |
Distributor
| Date Effective From: | 2015-10-01 |
|---|---|
| Date Effective To: | |
| Contact (Organization): | Northwest Fisheries Science Center (NWFSC) |
| Address: |
2725 Montlake Boulevard East Seattle, WA 98112 USA |
| ROR: | https://ror.org/05r7z1k40 |
| Email Address: | nmfs.nwfsc.metadata@noaa.gov |
| Phone: | 206-860-3200 |
| URL: | NWFSC Home |
Metadata Contact
| Date Effective From: | 2015-10-01 |
|---|---|
| Date Effective To: | |
| Contact (Organization): | Northwest Fisheries Science Center (NWFSC) |
| Address: |
2725 Montlake Boulevard East Seattle, WA 98112 USA |
| ROR: | https://ror.org/05r7z1k40 |
| Email Address: | nmfs.nwfsc.metadata@noaa.gov |
| Phone: | 206-860-3200 |
| URL: | NWFSC Home |
Originator
| Date Effective From: | 2015-10-01 |
|---|---|
| Date Effective To: | |
| Contact (Person): | Paranjpye, Rohinee N |
| Address: |
2725 Montlake Blvd East Seattle, WA 98112 |
| Email Address: | Rohinee.Paranjpye@noaa.gov |
| Phone: | 206-860-3421 |
| Fax: | 206-860-3467 |
Point of Contact
| Date Effective From: | 2015-10-01 |
|---|---|
| Date Effective To: | |
| Contact (Person): | Paranjpye, Rohinee N |
| Address: |
2725 Montlake Blvd East Seattle, WA 98112 |
| Email Address: | Rohinee.Paranjpye@noaa.gov |
| Phone: | 206-860-3421 |
| Fax: | 206-860-3467 |
Extents
Extent Group 1
Extent Group 1 / Geographic Area 1
| W° Bound: | -122.9462 | |
|---|---|---|
| E° Bound: | -122.9462 | |
| N° Bound: | 47.1785 | |
| S° Bound: | 47.1785 | |
| Description |
Totten Inlet: Totten Inlet, WA |
|
Extent Group 1 / Time Frame 1
| Time Frame Type: | Range |
|---|---|
| Start: | 2009-05-01 |
| End: | 2012-12-31 |
Extent Group 2
Extent Group 2 / Geographic Area 1
| W° Bound: | -122.574 | |
|---|---|---|
| E° Bound: | -122.574 | |
| N° Bound: | 47.8528 | |
| S° Bound: | 47.8528 | |
| Description |
Point Julia: Point Julia, WA |
|
Extent Group 2 / Time Frame 1
| Time Frame Type: | Range |
|---|---|
| Start: | 2009-05-01 |
| End: | 2012-12-31 |
Extent Group 3
Extent Group 3 / Geographic Area 1
| W° Bound: | -122.3062 | |
|---|---|---|
| E° Bound: | -122.3062 | |
| N° Bound: | 47.6449 | |
| S° Bound: | 47.6449 | |
| Description |
NWFSC Montlake: NWFSC Montlake, Seattle |
|
Extent Group 3 / Time Frame 1
| Time Frame Type: | Range |
|---|---|
| Start: | 2009-05-01 |
| End: | 2012-12-31 |
Access Information
| Security Class: | Unclassified |
|---|---|
| Data Access Procedure: |
At this time, contact the Data Manager for information on obtaining access to this data set. In the near future, the NWFSC will strive to provide all non-sensitive data resources as a web service in order to meet the NOAA Data Access Policy Directive (https://nosc.noaa.gov/EDMC/PD.DA.php). |
| Data Access Constraints: |
NA |
Distribution Information
Distribution 1
| Download URL: | https://pubmlst.org/vparahaemolyticus/ |
|---|---|
| Distributor: | Northwest Fisheries Science Center (NWFSC) (2015-10-01 - Present) |
| File Name: | Vibrio ecology |
| Description: |
Identifying environmental determinants favorable for the presence and transmission of pathogenic vibrios. |
Distribution 2
| Download URL: | https://pubmlst.org/vparahaemolyticus/ |
|---|---|
| Distributor: | Northwest Fisheries Science Center (NWFSC) (2015-10-01 - Present) |
| File Name: | Vibrio ecology |
| Description: |
Identifying environmental determinants favorable for the presence and transmission of pathogenic vibrios. |
URLs
URL 1
| URL: | https://www.webapps.nwfsc.noaa.gov/apex/parrdata/inventory/datasets/dataset/4350 |
|---|---|
| Name: | Vibrio ecology |
| URL Type: |
Online Resource
|
| File Resource Format: | Web site |
| Description: |
NWFSC Dataset Information page. Concentrations of Vibrio parahaemolyticus in oysters, water and sediments. Temperature, salinity, chlorophyll, SPM, DOC and pigment analysis |
URL 2
| URL: | https://pubmlst.org/vparahaemolyticus/ |
|---|---|
| Name: | PubMLST |
| URL Type: |
Online Resource
|
| File Resource Format: | Web site |
| Description: |
Concentrations of Vibrio parahaemolyticus in oysters, water and sediments. Temperature, salinity, chlorophyll, SPM, DOC and pigment analysis |
Technical Environment
| Description: |
Spreadsheet |
|---|
Data Quality
| Accuracy: |
High |
|---|---|
| Quality Control Procedures Employed: |
These data were collected and processed in accordance with established protocols and best practices under the direction of the project’s Principal Investigator. Contact the dataset Data Manager in section 3 for full QA/QC methodology. |
Data Management
| Have Resources for Management of these Data Been Identified?: | No |
|---|---|
| Approximate Percentage of Budget for these Data Devoted to Data Management: | 10 |
| Do these Data Comply with the Data Access Directive?: | No |
| Is Access to the Data Limited Based on an Approved Waiver?: | No |
| If Distributor (Data Hosting Service) is Needed, Please Indicate: | No |
| Approximate Delay Between Data Collection and Dissemination: | 0 days |
| If Delay is Longer than Latency of Automated Processing, Indicate Under What Authority Data Access is Delayed: |
No Delay |
| Actual or Planned Long-Term Data Archive Location: | NCEI-MD |
| Approximate Delay Between Data Collection and Archiving: | 365 |
| How Will the Data Be Protected from Accidental or Malicious Modification or Deletion Prior to Receipt by the Archive?: |
The Northwest Fisheries Science Center facilitates backup and recovery of all data and IT components which are managed by IT Operations through the capture of static (point-in-time) backup data to physical media. Once data is captured to physical media (every 1-3 days), a duplicate is made and routinely (weekly) transported to an offsite archive facility where it is maintained throughout the data's applicable life-cycle. |
Lineage
| Lineage Statement: |
NA |
|---|
Catalog Details
| Catalog Item ID: | 17945 |
|---|---|
| GUID: | gov.noaa.nmfs.inport:17945 |
| Metadata Record Created By: | Jeffrey W Cowen |
| Metadata Record Created: | 2013-01-29 18:04+0000 |
| Metadata Record Last Modified By: | SysAdmin InPortAdmin |
| Metadata Record Last Modified: | 2026-03-04 19:17+0000 |
| Metadata Record Published: | 2019-06-04 |
| Owner Org: | NWFSC |
| Metadata Publication Status: | Published Externally |
| Do Not Publish?: | N |
| Metadata Last Review Date: | 2019-06-04 |
| Metadata Review Frequency: | 1 Year |
| Metadata Next Review Date: | 2020-06-04 |
