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Short Citation:
Northwest Fisheries Science Center, 2022: Vibrio ecology - Identifying Environmental Determinants Favorable for the Presence and Transmission of Pathogenic Vibrios, https://www.fisheries.noaa.gov/inport/item/17945.

Item Identification

Title: Vibrio ecology - Identifying Environmental Determinants Favorable for the Presence and Transmission of Pathogenic Vibrios
Short Name: Vibrio ecology (Identifying Environmental Determinants Favorable for the Presence and Transmission of Pathogenic Vibrios)
Status: In Work
Creation Date: 2009-01-15
Publication Date: 2019-05-23
Abstract:

In a tri-coastal collaborative study, the population densities of vibrios are being determined in the Mississippi Sound, Puget Sound, Chesapeake Bay, and Timbalier Bay. Sea surface temperature (SST), salinity, pigments (including chlorophylls, fucoxanthins, and others), dissolved organic carbon, and suspended particulate matter will be measured and evaluated as predictors of vibrio densities in the context of multiple regression analysis.

Concentrations of Vibrio parahaemolyticus in oysters, water and sediments. Temperature, salinity, chlorophyll, SPM, DOC and pigment analysis.

Purpose:

Raw/field data, Monitoring or sensor data, Time series (of types 1-3), Laboratory data

Notes:

Loaded by batch 4228, 01-29-2013 18:04

Supplemental Information:

Subject to Public Access to Research Results (PARR): Yes

Peer Reviewed Publication: complete joint manuscript. manuscript

Keywords

Theme Keywords

Thesaurus Keyword
UNCONTROLLED
None pathogen
None seafood safety
None Vibrio

Spatial Keywords

Thesaurus Keyword
UNCONTROLLED
None NWFSC Montlake
None Point Julia
None Totten Inlet

Instrument Keywords

Thesaurus Keyword
UNCONTROLLED
None Instrument Not Applicable

Physical Location

Organization: Northwest Fisheries Science Center
City: Seattle
State/Province: WA
Country: USA

Data Set Information

Data Set Scope Code: Data Set
Data Set Type: Spreadsheet
Data Presentation Form: Table (digital)

Support Roles

Data Steward

CC ID: 852818
Date Effective From: 2015-10-01
Date Effective To:
Contact (Person): Paranjpye, Rohinee N
Address: 2725 Montlake Blvd East
Seattle, WA 98112
Email Address: Rohinee.Paranjpye@noaa.gov
Phone: 206-860-3421
Fax: 206-860-3467

Distributor

CC ID: 852819
Date Effective From: 2015-10-01
Date Effective To:
Contact (Organization): Northwest Fisheries Science Center (NWFSC)
Address: 2725 Montlake Boulevard East
Seattle, WA 98112
USA
Email Address: nmfs.nwfsc.metadata@noaa.gov
Phone: 206-860-3200
URL: NWFSC Home

Metadata Contact

CC ID: 852817
Date Effective From: 2015-10-01
Date Effective To:
Contact (Organization): Northwest Fisheries Science Center (NWFSC)
Address: 2725 Montlake Boulevard East
Seattle, WA 98112
USA
Email Address: nmfs.nwfsc.metadata@noaa.gov
Phone: 206-860-3200
URL: NWFSC Home

Originator

CC ID: 852821
Date Effective From: 2015-10-01
Date Effective To:
Contact (Person): Paranjpye, Rohinee N
Address: 2725 Montlake Blvd East
Seattle, WA 98112
Email Address: Rohinee.Paranjpye@noaa.gov
Phone: 206-860-3421
Fax: 206-860-3467

Point of Contact

CC ID: 852820
Date Effective From: 2015-10-01
Date Effective To:
Contact (Person): Paranjpye, Rohinee N
Address: 2725 Montlake Blvd East
Seattle, WA 98112
Email Address: Rohinee.Paranjpye@noaa.gov
Phone: 206-860-3421
Fax: 206-860-3467

Extents

Extent Group 1

Extent Group 1 / Geographic Area 1

CC ID: 852828
W° Bound: -122.9462
E° Bound: -122.9462
N° Bound: 47.1785
S° Bound: 47.1785
Description

Totten Inlet: Totten Inlet, WA

Extent Group 1 / Time Frame 1

CC ID: 852827
Time Frame Type: Range
Start: 2009-05-01
End: 2012-12-31

Extent Group 2

Extent Group 2 / Geographic Area 1

CC ID: 852831
W° Bound: -122.574
E° Bound: -122.574
N° Bound: 47.8528
S° Bound: 47.8528
Description

Point Julia: Point Julia, WA

Extent Group 2 / Time Frame 1

CC ID: 852830
Time Frame Type: Range
Start: 2009-05-01
End: 2012-12-31

Extent Group 3

Extent Group 3 / Geographic Area 1

CC ID: 852834
W° Bound: -122.3062
E° Bound: -122.3062
N° Bound: 47.6449
S° Bound: 47.6449
Description

NWFSC Montlake: NWFSC Montlake, Seattle

Extent Group 3 / Time Frame 1

CC ID: 852833
Time Frame Type: Range
Start: 2009-05-01
End: 2012-12-31

Access Information

Security Class: Unclassified
Data Access Procedure:

At this time, contact the Data Manager for information on obtaining access to this data set. In the near future, the NWFSC will strive to provide all non-sensitive data resources as a web service in order to meet the NOAA Data Access Policy Directive (https://nosc.noaa.gov/EDMC/PD.DA.php).

Data Access Constraints:

NA

Distribution Information

Distribution 1

CC ID: 852823
Start Date: 2019-05-23
End Date: Present
Download URL: https://pubmlst.org/vparahaemolyticus/
Distributor: Northwest Fisheries Science Center (NWFSC) (2015-10-01 - Present)
File Name: Vibrio ecology
Description:

Identifying environmental determinants favorable for the presence and transmission of pathogenic vibrios.

Distribution 2

CC ID: 852822
Start Date: 2019-05-23
End Date: Present
Download URL: https://pubmlst.org/vparahaemolyticus/
Distributor: Northwest Fisheries Science Center (NWFSC) (2015-10-01 - Present)
File Name: Vibrio ecology
Description:

Identifying environmental determinants favorable for the presence and transmission of pathogenic vibrios.

URLs

URL 1

CC ID: 852824
URL: https://www.webapps.nwfsc.noaa.gov/apex/parrdata/inventory/datasets/dataset/4350
Name: Vibrio ecology
URL Type:
Online Resource
File Resource Format: Web site
Description:

NWFSC Dataset Information page. Concentrations of Vibrio parahaemolyticus in oysters, water and sediments. Temperature, salinity, chlorophyll, SPM, DOC and pigment analysis

URL 2

CC ID: 852825
URL: https://pubmlst.org/vparahaemolyticus/
Name: PubMLST
URL Type:
Online Resource
File Resource Format: Web site
Description:

Concentrations of Vibrio parahaemolyticus in oysters, water and sediments. Temperature, salinity, chlorophyll, SPM, DOC and pigment analysis

Technical Environment

Description:

Spreadsheet

Data Quality

Accuracy:

High

Quality Control Procedures Employed:

These data were collected and processed in accordance with established protocols and best practices under the direction of the project’s Principal Investigator. Contact the dataset Data Manager in section 3 for full QA/QC methodology.

Data Management

Have Resources for Management of these Data Been Identified?: No
Approximate Percentage of Budget for these Data Devoted to Data Management: 10
Do these Data Comply with the Data Access Directive?: No
Is Access to the Data Limited Based on an Approved Waiver?: No
If Distributor (Data Hosting Service) is Needed, Please Indicate: No
Approximate Delay Between Data Collection and Dissemination: 0 days
If Delay is Longer than Latency of Automated Processing, Indicate Under What Authority Data Access is Delayed:

No Delay

Actual or Planned Long-Term Data Archive Location: NCEI-MD
Approximate Delay Between Data Collection and Archiving: 365
How Will the Data Be Protected from Accidental or Malicious Modification or Deletion Prior to Receipt by the Archive?:

The Northwest Fisheries Science Center facilitates backup and recovery of all data and IT components which are managed by IT Operations through the capture of static (point-in-time) backup data to physical media. Once data is captured to physical media (every 1-3 days), a duplicate is made and routinely (weekly) transported to an offsite archive facility where it is maintained throughout the data's applicable life-cycle.

Lineage

Lineage Statement:

NA

Catalog Details

Catalog Item ID: 17945
GUID: gov.noaa.nmfs.inport:17945
Metadata Record Created By: Jeffrey W Cowen
Metadata Record Created: 2013-01-29 18:04+0000
Metadata Record Last Modified By: Jeffrey W Cowen
Metadata Record Last Modified: 2019-06-04 17:39+0000
Metadata Record Published: 2019-06-04
Owner Org: NWFSC
Metadata Publication Status: Published Externally
Do Not Publish?: N
Metadata Next Review Date: 2020-06-04