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Short Citation:
Northwest Fisheries Science Center, 2022: Elwha genetics - Elwha river salmonid genetics, https://www.fisheries.noaa.gov/inport/item/17973.

Item Identification

Title: Elwha genetics - Elwha river salmonid genetics
Short Name: Elwha genetics (Elwha river salmonid genetics)
Status: In Work
Creation Date: 2012-10-01
Publication Date: 2018-01-25
Abstract:

The Elwha Dams have been removed, with fish restoration to occur in areas previously inaccessible to salmonids. Fish recovery anticipates that genetic changes will occur to current populations, primarily due to genetic introgression between introduced and native stocks. For monitoring to occur, baseline genetics of Elwha river salmonids will be conducted on current populations.

Genetic data.

Purpose:

Addresses Legal Mandate

Raw/field data, Monitoring or sensor data, Laboratory data

Notes:

Loaded by batch 4261, 01-30-2013 17:44

Supplemental Information:

Subject to Public Access to Research Results (PARR): Yes

Keywords

Theme Keywords

Thesaurus Keyword
UNCONTROLLED
None Elwha River

Spatial Keywords

Thesaurus Keyword
UNCONTROLLED
None NWFSC Montlake

Instrument Keywords

Thesaurus Keyword
UNCONTROLLED
None DNA Sequencer

Platform Keywords

Thesaurus Keyword
UNCONTROLLED
None Animal and Plant Collection Device

Physical Location

Organization: Northwest Fisheries Science Center
City: Seattle
State/Province: WA
Country: USA

Data Set Information

Data Set Scope Code: Data Set
Data Set Type: Spreadsheet
Data Presentation Form: Table (digital)

Support Roles

Data Steward

CC ID: 847739
Date Effective From: 2015-10-01
Date Effective To:
Contact (Person): Park, Linda
Address: 2725 Montlake Boulevard East
Seattle, WA 98112
Email Address: Linda.Park@noaa.gov
Phone: 206-860-3241

Distributor

CC ID: 847740
Date Effective From: 2015-10-01
Date Effective To:
Contact (Organization): Northwest Fisheries Science Center (NWFSC)
Address: 2725 Montlake Boulevard East
Seattle, WA 98112
USA
Email Address: nmfs.nwfsc.metadata@noaa.gov
Phone: 206-860-3200
URL: NWFSC Home

Metadata Contact

CC ID: 847738
Date Effective From: 2015-10-01
Date Effective To:
Contact (Organization): Northwest Fisheries Science Center (NWFSC)
Address: 2725 Montlake Boulevard East
Seattle, WA 98112
USA
Email Address: nmfs.nwfsc.metadata@noaa.gov
Phone: 206-860-3200
URL: NWFSC Home

Originator

CC ID: 847742
Date Effective From: 2015-10-01
Date Effective To:
Contact (Person): Winans, Gary
Address: 2725 Montlake Boulevard East
Seattle, WA 98112
Email Address: gary.winans@noaa.gov
Phone: 206-860-3265

Point of Contact

CC ID: 847741
Date Effective From: 2015-10-01
Date Effective To:
Contact (Person): Park, Linda
Address: 2725 Montlake Boulevard East
Seattle, WA 98112
Email Address: Linda.Park@noaa.gov
Phone: 206-860-3241

Extents

Extent Group 1

Extent Group 1 / Geographic Area 1

CC ID: 847749
W° Bound: -122.3062
E° Bound: -122.3062
N° Bound: 47.6449
S° Bound: 47.6449
Description

NWFSC Montlake: NWFSC Montlake DNA Lab

Extent Group 1 / Time Frame 1

CC ID: 847748
Time Frame Type: Continuing
Start: 2005-10-01

Access Information

Security Class: Unclassified
Data Access Procedure:

At this time, contact the Data Manager for information on obtaining access to this data set. In the near future, the NWFSC will strive to provide all non-sensitive data resources as a web service in order to meet the NOAA Data Access Policy Directive (https://nosc.noaa.gov/EDMC/PD.DA.php).

Data Access Constraints:

NA

Distribution Information

Distribution 1

CC ID: 847743
Start Date: 2018-01-25
End Date: Present
Download URL: https://www.webapps.nwfsc.noaa.gov/apex/parrdata/inventory/tables/table/elwha_steelhead_genetics
Distributor: Northwest Fisheries Science Center (NWFSC) (2015-10-01 - Present)
File Name: Elwha Steelhead Genetics
Description:

This is a table of raw microsatellite genotypes for Onchorhynchus mykiss (both steelhead and rainbow trout) in the Elwha River watershed, WA, where each locus is represented by two alleles, 3 digits for each allele, where alleles are mobility/size determined, per standard published criteria. Loci are described in Winans et al. 2014. Conservation Genetics. 10.1007/s10592-014-0659-z. Data are grouped by collections. Each collection is separated by "pop." The first individual in a collection has an abbreviation for its collection name. They are in order: (rainbow trout collections) Delabarre, Chicago, Camp Wilder, Camp Wilder, Hayes ,Elkhorn, Geyser, Geyser, Cat, Whiskey Bend, Altaire, Griff Cr., Griff Cr., Madison Cr., Side Channel, Little R., Reservoir, S. Branch Little R., S. Branch Little R., (Steelhead collections), Brood Year 05, Brood Year 06, Brood Year 07, Brood Year 08, Brood Year 09, Brood Year 10, Brood Year 11, LEKT Hatchery, LEKT Hatchery, (Hatchery trout), Goldendale trout, Spokane trout.

Distribution 2

CC ID: 847744
Start Date: 2018-01-25
End Date: Present
Download URL: https://www.webapps.nwfsc.noaa.gov/parr/CB_17270_Winans_2016_Elwha_and_Steelhead_genetics_QAQC.xlsx
Distributor: Northwest Fisheries Science Center (NWFSC) (2015-10-01 - Present)
File Name: Elwha Steelhead Genetics
Description:

This is a table of raw microsatellite genotypes for Onchorhynchus mykiss (both steelhead and rainbow trout) in the Elwha River watershed, WA, where each locus is represented by two alleles, 3 digits for each allele, where alleles are mobility/size determined, per standard published criteria. Loci are described in Winans et al. 2014. Conservation Genetics. 10.1007/s10592-014-0659-z. Data are grouped by collections. Each collection is separated by "pop." The first individual in a collection has an abbreviation for its collection name. They are in order: (rainbow trout collections) Delabarre, Chicago, Camp Wilder, Camp Wilder, Hayes ,Elkhorn, Geyser, Geyser, Cat, Whiskey Bend, Altaire, Griff Cr., Griff Cr., Madison Cr., Side Channel, Little R., Reservoir, S. Branch Little R., S. Branch Little R., (Steelhead collections), Brood Year 05, Brood Year 06, Brood Year 07, Brood Year 08, Brood Year 09, Brood Year 10, Brood Year 11, LEKT Hatchery, LEKT Hatchery, (Hatchery trout), Goldendale trout, Spokane trout.

URLs

URL 1

CC ID: 847745
URL: https://www.webapps.nwfsc.noaa.gov/apex/parrdata/inventory/datasets/dataset/17270
Name: Elwha genetics
URL Type:
Online Resource
File Resource Format: Web site
Description:

NWFSC Dataset Information page. Genetic data

URL 2

CC ID: 847746
URL: https://www.webapps.nwfsc.noaa.gov/parr/CB_17270_Winans_2016_Elwha_and_Steelhead_genetics_QAQC.xlsx
Name: https://www.webapps.nwfsc.noaa.gov/parr/CB_17270_Winans_2016_Elwha_and_Steelhead_genetics_QAQC.xlsx
URL Type:
Online Resource
File Resource Format: Web site
Description:

Genetic data

Technical Environment

Description:

Spreadsheet

Data Quality

Accuracy:

Low

Quality Control Procedures Employed:

These data were collected and processed in accordance with established protocols and best practices under the direction of the project’s Principal Investigator. Contact the dataset Data Manager in section 3 for full QA/QC methodology.

Data Management

Have Resources for Management of these Data Been Identified?: Yes
Approximate Percentage of Budget for these Data Devoted to Data Management: 0
Do these Data Comply with the Data Access Directive?: No
Is Access to the Data Limited Based on an Approved Waiver?: No
If Distributor (Data Hosting Service) is Needed, Please Indicate: Yes
Approximate Delay Between Data Collection and Dissemination: 0 days
If Delay is Longer than Latency of Automated Processing, Indicate Under What Authority Data Access is Delayed:

No Delay

Actual or Planned Long-Term Data Archive Location: NCEI-MD
Approximate Delay Between Data Collection and Archiving: 365
How Will the Data Be Protected from Accidental or Malicious Modification or Deletion Prior to Receipt by the Archive?:

The Northwest Fisheries Science Center facilitates backup and recovery of all data and IT components which are managed by IT Operations through the capture of static (point-in-time) backup data to physical media. Once data is captured to physical media (every 1-3 days), a duplicate is made and routinely (weekly) transported to an offsite archive facility where it is maintained throughout the data's applicable life-cycle.

Lineage

Lineage Statement:

Standard population genetic analyses was performed

Catalog Details

Catalog Item ID: 17973
GUID: gov.noaa.nmfs.inport:17973
Metadata Record Created By: Jeffrey W Cowen
Metadata Record Created: 2013-01-30 17:44+0000
Metadata Record Last Modified By: SysAdmin InPortAdmin
Metadata Record Last Modified: 2022-08-09 17:11+0000
Metadata Record Published: 2019-06-04
Owner Org: NWFSC
Metadata Publication Status: Published Externally
Do Not Publish?: N
Metadata Last Review Date: 2019-06-04
Metadata Review Frequency: 1 Year
Metadata Next Review Date: 2020-06-04