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Short Citation:
Northwest Fisheries Science Center, 2022: Migration of steelhead - Genetic Basis of Migratory Tendency and Life History Plasticity in Oncorhynchus mykiss, https://www.fisheries.noaa.gov/inport/item/18061.

Item Identification

Title: Migration of steelhead - Genetic Basis of Migratory Tendency and Life History Plasticity in Oncorhynchus mykiss
Short Name: Migration of steelhead (Genetic basis of migratory tendency in oncorhynchus mykiss)
Status: Completed
Creation Date: 2010-10-01
Publication Date: 2017-08-30
Abstract:

Steelhead population abundance is depressed throughout much of its southern range, and several Distinct Population Segments (DPSs) are listed as threatened or endangered under the US Endangered Species Act (ESA). Some anadromous populations are associated with relatively large resident trout populations, and some of these resident populations can produce migrating smolts. We are trying to determine the genetic architecture, population history, and plasticity of anadromy and residency in this species, with the intent of determining whether the hybrid migratory strategy expressed in wild populations like this is key to maintaining long-term resilience and productivity of anadromous populations. This collection of NWFSC Genetics and Evolution Program studies represents a long-term collaboration between NWFSC and the Alaska Fisheries Science Center, the Southwest Fisheries Science Center, the National Park Service, the US Forest Service, the Lower Elwha Klallam Tribe, and the US Geological Survey to understand the intrinsic (biological, genetic) and extrinsic (environmental) factors that influence production, diversity, and variation in these characteristics in wild steelhead and the resident trout they interact with. It involves annual fieldwork to collect data on juvenile and adult fish and reconstruct their molecular pedigrees and conduct quantitative genetic analyses, as well as to assess temporal trends in abundance and productivity and the condition of their freshwater habitats.

Genetic basis of migratory tendency and life history plasticity in Oncorhynchus mykiss.

Purpose:

Raw/field data, Model results, Laboratory data

Notes:

Loaded by batch 4317, 02-01-2013 16:44

Supplemental Information:

Subject to Public Access to Research Results (PARR): Yes

Peer Reviewed Publication:

Keywords

Theme Keywords

Thesaurus Keyword
UNCONTROLLED
None pedigree reconstruction
None population viability analysis
None quantitative genetics
None steelhead

Spatial Keywords

Thesaurus Keyword
UNCONTROLLED
None NMFS Little Port Walter
None NWFSC Manchester
None NWFSC Montlake

Instrument Keywords

Thesaurus Keyword
UNCONTROLLED
None DNA Sequencer

Physical Location

Organization: Northwest Fisheries Science Center
City: Seattle
State/Province: WA
Country: USA

Data Set Information

Data Set Scope Code: Data Set
Data Set Type: Spreadsheet
Data Presentation Form: Table (digital)

Support Roles

Data Steward

CC ID: 847896
Date Effective From: 2015-10-01
Date Effective To:
Contact (Person): Nichols, Krista
Address: 2725 Montlake Boulevard East
Seattle, WA 98112
Email Address: Krista.Nichols@noaa.gov
Phone: 206-302-2470

Distributor

CC ID: 847897
Date Effective From: 2015-10-01
Date Effective To:
Contact (Organization): Northwest Fisheries Science Center (NWFSC)
Address: 2725 Montlake Boulevard East
Seattle, WA 98112
USA
Email Address: nmfs.nwfsc.metadata@noaa.gov
Phone: 206-860-3200
URL: NWFSC Home

Metadata Contact

CC ID: 847895
Date Effective From: 2015-10-01
Date Effective To:
Contact (Organization): Northwest Fisheries Science Center (NWFSC)
Address: 2725 Montlake Boulevard East
Seattle, WA 98112
USA
Email Address: nmfs.nwfsc.metadata@noaa.gov
Phone: 206-860-3200
URL: NWFSC Home

Originator

CC ID: 847899
Date Effective From: 2015-10-01
Date Effective To:
Contact (Person): Nichols, Krista
Address: 2725 Montlake Boulevard East
Seattle, WA 98112
Email Address: Krista.Nichols@noaa.gov
Phone: 206-302-2470

Point of Contact

CC ID: 847898
Date Effective From: 2015-10-01
Date Effective To:
Contact (Person): Nichols, Krista
Address: 2725 Montlake Boulevard East
Seattle, WA 98112
Email Address: Krista.Nichols@noaa.gov
Phone: 206-302-2470

Extents

Extent Group 1

Extent Group 1 / Geographic Area 1

CC ID: 847906
W° Bound: -122.3062
E° Bound: -122.3062
N° Bound: 47.6449
S° Bound: 47.6449
Description

NMFS Little Port Walter: NMFS (AFSC) Little Port Walter, Alaska, research station

Extent Group 1 / Time Frame 1

CC ID: 847905
Time Frame Type: Continuing
Start: 1997-06-01

Extent Group 2

Extent Group 2 / Geographic Area 1

CC ID: 847909
W° Bound: -122.3062
E° Bound: -122.3062
N° Bound: 47.6449
S° Bound: 47.6449
Description

NWFSC Montlake: NWFSC Montlake lab

Extent Group 2 / Time Frame 1

CC ID: 847908
Time Frame Type: Continuing
Start: 1997-06-01

Extent Group 3

Extent Group 3 / Geographic Area 1

CC ID: 847912
W° Bound: -122.3062
E° Bound: -122.3062
N° Bound: 47.6449
S° Bound: 47.6449
Description

NWFSC Manchester: NWFSC Manchester lab

Extent Group 3 / Time Frame 1

CC ID: 847911
Time Frame Type: Continuing
Start: 2015-06-01

Access Information

Security Class: Unclassified
Data Access Procedure:

At this time, contact the Data Manager for information on obtaining access to this data set. In the near future, the NWFSC will strive to provide all non-sensitive data resources as a web service in order to meet the NOAA Data Access Policy Directive (https://nosc.noaa.gov/EDMC/PD.DA.php).

Data Access Constraints:

NA

Distribution Information

Distribution 1

CC ID: 847901
Start Date: 2017-08-30
End Date: Present
Download URL: http://datadryad.org/resource/doi:10.5061/dryad.c6fb2
Distributor: Northwest Fisheries Science Center (NWFSC) (2015-10-01 - Present)
File Name: Migration of steelhead
Description:

Genetic basis of migratory tendency and life history plasticity in Oncorhynchus mykiss

Distribution 2

CC ID: 847900
Start Date: 2017-08-30
End Date: Present
Download URL: https://www.webapps.nwfsc.noaa.gov/apex/parrdata/inventory/tables/table/migration_of_steelhead
Distributor: Northwest Fisheries Science Center (NWFSC) (2015-10-01 - Present)
File Name: Migration of steelhead
Description:

Genetic basis of migratory tendency and life history plasticity in Oncorhynchus mykiss

URLs

URL 1

CC ID: 847902
URL: https://www.webapps.nwfsc.noaa.gov/apex/parrdata/inventory/datasets/dataset/13745
Name: Migration of steelhead
URL Type:
Online Resource
File Resource Format: Web site
Description:

NWFSC Dataset Information page. Genetic basis of migratory tendency and life history plasticity in Oncorhynchus mykiss

URL 2

CC ID: 847903
URL: http://datadryad.org/resource/doi:10.5061/dryad.c6fb2
Name: http://datadryad.org/resource/doi:10.5061/dryad.c6fb2
URL Type:
Online Resource
File Resource Format: Web site
Description:

Genetic basis of migratory tendency and life history plasticity in Oncorhynchus mykiss

Technical Environment

Description:

Spreadsheet

Data Quality

Accuracy:

High

Quality Control Procedures Employed:

These data were collected and processed in accordance with established protocols and best practices under the direction of the project’s Principal Investigator. Contact the dataset Data Manager in section 3 for full QA/QC methodology.

Data Management

Have Resources for Management of these Data Been Identified?: No
Approximate Percentage of Budget for these Data Devoted to Data Management: 1
Do these Data Comply with the Data Access Directive?: No
Is Access to the Data Limited Based on an Approved Waiver?: No
If Distributor (Data Hosting Service) is Needed, Please Indicate: No
Approximate Delay Between Data Collection and Dissemination: 0 days
If Delay is Longer than Latency of Automated Processing, Indicate Under What Authority Data Access is Delayed:

No Delay

Actual or Planned Long-Term Data Archive Location: NCEI-MD
Approximate Delay Between Data Collection and Archiving: 90
How Will the Data Be Protected from Accidental or Malicious Modification or Deletion Prior to Receipt by the Archive?:

The Northwest Fisheries Science Center facilitates backup and recovery of all data and IT components which are managed by IT Operations through the capture of static (point-in-time) backup data to physical media. Once data is captured to physical media (every 1-3 days), a duplicate is made and routinely (weekly) transported to an offsite archive facility where it is maintained throughout the data's applicable life-cycle.

Lineage

Lineage Statement:

Allele frequency and genotypic data generated from DNA sequence. These data were collected and processed in accordance with established protocols and best practices under the direction of the project’s Principal Investigator. Contact the dataset Data Manager for full QA/QC methodology.

Catalog Details

Catalog Item ID: 18061
GUID: gov.noaa.nmfs.inport:18061
Metadata Record Created By: Jeffrey W Cowen
Metadata Record Created: 2013-02-01 16:44+0000
Metadata Record Last Modified By: SysAdmin InPortAdmin
Metadata Record Last Modified: 2019-06-04 13:14+0000
Metadata Record Published: 2019-06-04
Owner Org: NWFSC
Metadata Publication Status: Published Externally
Do Not Publish?: N
Metadata Next Review Date: 2020-06-04