Migration of steelhead - Genetic Basis of Migratory Tendency and Life History Plasticity in Oncorhynchus mykiss
Data Set (DS) | Northwest Fisheries Science Center (NWFSC)GUID: gov.noaa.nmfs.inport:18061 | Updated: August 9, 2022 | Published / External
Summary
Short Citation
Northwest Fisheries Science Center, 2024: Migration of steelhead - Genetic Basis of Migratory Tendency and Life History Plasticity in Oncorhynchus mykiss, https://www.fisheries.noaa.gov/inport/item/18061.
Full Citation Examples
Steelhead population abundance is depressed throughout much of its southern range, and several Distinct Population Segments (DPSs) are listed as threatened or endangered under the US Endangered Species Act (ESA). Some anadromous populations are associated with relatively large resident trout populations, and some of these resident populations can produce migrating smolts. We are trying to determine the genetic architecture, population history, and plasticity of anadromy and residency in this species, with the intent of determining whether the hybrid migratory strategy expressed in wild populations like this is key to maintaining long-term resilience and productivity of anadromous populations. This collection of NWFSC Genetics and Evolution Program studies represents a long-term collaboration between NWFSC and the Alaska Fisheries Science Center, the Southwest Fisheries Science Center, the National Park Service, the US Forest Service, the Lower Elwha Klallam Tribe, and the US Geological Survey to understand the intrinsic (biological, genetic) and extrinsic (environmental) factors that influence production, diversity, and variation in these characteristics in wild steelhead and the resident trout they interact with. It involves annual fieldwork to collect data on juvenile and adult fish and reconstruct their molecular pedigrees and conduct quantitative genetic analyses, as well as to assess temporal trends in abundance and productivity and the condition of their freshwater habitats.
Genetic basis of migratory tendency and life history plasticity in Oncorhynchus mykiss.
Distribution Information
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Genetic basis of migratory tendency and life history plasticity in Oncorhynchus mykiss
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Genetic basis of migratory tendency and life history plasticity in Oncorhynchus mykiss
NA
Child Items
No Child Items for this record.
Contact Information
Point of Contact
Krista Nichols
Krista.Nichols@noaa.gov
206-302-2470
Metadata Contact
Northwest Fisheries Science Center (NWFSC)
nmfs.nwfsc.metadata@noaa.gov
206-860-3200
NWFSC Home
Extents
-122.3062° W,
-122.3062° E,
47.6449° N,
47.6449° S
NMFS Little Port Walter: NMFS (AFSC) Little Port Walter, Alaska, research station
1997-06-01 - Present
Item Identification
Title: | Migration of steelhead - Genetic Basis of Migratory Tendency and Life History Plasticity in Oncorhynchus mykiss |
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Short Name: | Migration of steelhead (Genetic basis of migratory tendency in oncorhynchus mykiss) |
Status: | Completed |
Creation Date: | 2010-10-01 |
Publication Date: | 2017-08-30 |
Abstract: |
Steelhead population abundance is depressed throughout much of its southern range, and several Distinct Population Segments (DPSs) are listed as threatened or endangered under the US Endangered Species Act (ESA). Some anadromous populations are associated with relatively large resident trout populations, and some of these resident populations can produce migrating smolts. We are trying to determine the genetic architecture, population history, and plasticity of anadromy and residency in this species, with the intent of determining whether the hybrid migratory strategy expressed in wild populations like this is key to maintaining long-term resilience and productivity of anadromous populations. This collection of NWFSC Genetics and Evolution Program studies represents a long-term collaboration between NWFSC and the Alaska Fisheries Science Center, the Southwest Fisheries Science Center, the National Park Service, the US Forest Service, the Lower Elwha Klallam Tribe, and the US Geological Survey to understand the intrinsic (biological, genetic) and extrinsic (environmental) factors that influence production, diversity, and variation in these characteristics in wild steelhead and the resident trout they interact with. It involves annual fieldwork to collect data on juvenile and adult fish and reconstruct their molecular pedigrees and conduct quantitative genetic analyses, as well as to assess temporal trends in abundance and productivity and the condition of their freshwater habitats. Genetic basis of migratory tendency and life history plasticity in Oncorhynchus mykiss. |
Purpose: |
Raw/field data, Model results, Laboratory data |
Notes: |
Loaded by batch 4317, 02-01-2013 16:44 |
Supplemental Information: |
Subject to Public Access to Research Results (PARR): Yes Peer Reviewed Publication: |
Keywords
Theme Keywords
Thesaurus | Keyword |
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UNCONTROLLED | |
None | pedigree reconstruction |
None | population viability analysis |
None | quantitative genetics |
None | steelhead |
Spatial Keywords
Thesaurus | Keyword |
---|---|
UNCONTROLLED | |
None | NMFS Little Port Walter |
None | NWFSC Manchester |
None | NWFSC Montlake |
Instrument Keywords
Thesaurus | Keyword |
---|---|
UNCONTROLLED | |
None | DNA Sequencer |
Physical Location
Organization: | Northwest Fisheries Science Center |
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City: | Seattle |
State/Province: | WA |
Country: | USA |
Data Set Information
Data Set Scope Code: | Data Set |
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Data Set Type: | Spreadsheet |
Data Presentation Form: | Table (digital) |
Support Roles
Data Steward
Date Effective From: | 2015-10-01 |
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Date Effective To: | |
Contact (Person): | Nichols, Krista |
Address: |
2725 Montlake Boulevard East Seattle, WA 98112 |
Email Address: | Krista.Nichols@noaa.gov |
Phone: | 206-302-2470 |
Distributor
Date Effective From: | 2015-10-01 |
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Date Effective To: | |
Contact (Organization): | Northwest Fisheries Science Center (NWFSC) |
Address: |
2725 Montlake Boulevard East Seattle, WA 98112 USA |
Email Address: | nmfs.nwfsc.metadata@noaa.gov |
Phone: | 206-860-3200 |
URL: | NWFSC Home |
Metadata Contact
Date Effective From: | 2015-10-01 |
---|---|
Date Effective To: | |
Contact (Organization): | Northwest Fisheries Science Center (NWFSC) |
Address: |
2725 Montlake Boulevard East Seattle, WA 98112 USA |
Email Address: | nmfs.nwfsc.metadata@noaa.gov |
Phone: | 206-860-3200 |
URL: | NWFSC Home |
Originator
Date Effective From: | 2015-10-01 |
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Date Effective To: | |
Contact (Person): | Nichols, Krista |
Address: |
2725 Montlake Boulevard East Seattle, WA 98112 |
Email Address: | Krista.Nichols@noaa.gov |
Phone: | 206-302-2470 |
Point of Contact
Date Effective From: | 2015-10-01 |
---|---|
Date Effective To: | |
Contact (Person): | Nichols, Krista |
Address: |
2725 Montlake Boulevard East Seattle, WA 98112 |
Email Address: | Krista.Nichols@noaa.gov |
Phone: | 206-302-2470 |
Extents
Extent Group 1
Extent Group 1 / Geographic Area 1
W° Bound: | -122.3062 | |
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E° Bound: | -122.3062 | |
N° Bound: | 47.6449 | |
S° Bound: | 47.6449 | |
Description |
NMFS Little Port Walter: NMFS (AFSC) Little Port Walter, Alaska, research station |
Extent Group 1 / Time Frame 1
Time Frame Type: | Continuing |
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Start: | 1997-06-01 |
Extent Group 2
Extent Group 2 / Geographic Area 1
W° Bound: | -122.3062 | |
---|---|---|
E° Bound: | -122.3062 | |
N° Bound: | 47.6449 | |
S° Bound: | 47.6449 | |
Description |
NWFSC Montlake: NWFSC Montlake lab |
Extent Group 2 / Time Frame 1
Time Frame Type: | Continuing |
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Start: | 1997-06-01 |
Extent Group 3
Extent Group 3 / Geographic Area 1
W° Bound: | -122.3062 | |
---|---|---|
E° Bound: | -122.3062 | |
N° Bound: | 47.6449 | |
S° Bound: | 47.6449 | |
Description |
NWFSC Manchester: NWFSC Manchester lab |
Extent Group 3 / Time Frame 1
Time Frame Type: | Continuing |
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Start: | 2015-06-01 |
Access Information
Security Class: | Unclassified |
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Data Access Procedure: |
At this time, contact the Data Manager for information on obtaining access to this data set. In the near future, the NWFSC will strive to provide all non-sensitive data resources as a web service in order to meet the NOAA Data Access Policy Directive (https://nosc.noaa.gov/EDMC/PD.DA.php). |
Data Access Constraints: |
NA |
Distribution Information
Distribution 1
Start Date: | 2017-08-30 |
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End Date: | Present |
Download URL: | http://datadryad.org/resource/doi:10.5061/dryad.c6fb2 |
Distributor: | Northwest Fisheries Science Center (NWFSC) (2015-10-01 - Present) |
File Name: | Migration of steelhead |
Description: |
Genetic basis of migratory tendency and life history plasticity in Oncorhynchus mykiss |
Distribution 2
Start Date: | 2017-08-30 |
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End Date: | Present |
Download URL: | https://www.webapps.nwfsc.noaa.gov/apex/parrdata/inventory/tables/table/migration_of_steelhead |
Distributor: | Northwest Fisheries Science Center (NWFSC) (2015-10-01 - Present) |
File Name: | Migration of steelhead |
Description: |
Genetic basis of migratory tendency and life history plasticity in Oncorhynchus mykiss |
URLs
URL 1
URL: | https://www.webapps.nwfsc.noaa.gov/apex/parrdata/inventory/datasets/dataset/13745 |
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Name: | Migration of steelhead |
URL Type: |
Online Resource
|
File Resource Format: | Web site |
Description: |
NWFSC Dataset Information page. Genetic basis of migratory tendency and life history plasticity in Oncorhynchus mykiss |
URL 2
URL: | http://datadryad.org/resource/doi:10.5061/dryad.c6fb2 |
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Name: | http://datadryad.org/resource/doi:10.5061/dryad.c6fb2 |
URL Type: |
Online Resource
|
File Resource Format: | Web site |
Description: |
Genetic basis of migratory tendency and life history plasticity in Oncorhynchus mykiss |
Technical Environment
Description: |
Spreadsheet |
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Data Quality
Accuracy: |
High |
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Quality Control Procedures Employed: |
These data were collected and processed in accordance with established protocols and best practices under the direction of the project’s Principal Investigator. Contact the dataset Data Manager in section 3 for full QA/QC methodology. |
Data Management
Have Resources for Management of these Data Been Identified?: | No |
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Approximate Percentage of Budget for these Data Devoted to Data Management: | 1 |
Do these Data Comply with the Data Access Directive?: | No |
Is Access to the Data Limited Based on an Approved Waiver?: | No |
If Distributor (Data Hosting Service) is Needed, Please Indicate: | No |
Approximate Delay Between Data Collection and Dissemination: | 0 days |
If Delay is Longer than Latency of Automated Processing, Indicate Under What Authority Data Access is Delayed: |
No Delay |
Actual or Planned Long-Term Data Archive Location: | NCEI-MD |
Approximate Delay Between Data Collection and Archiving: | 90 |
How Will the Data Be Protected from Accidental or Malicious Modification or Deletion Prior to Receipt by the Archive?: |
The Northwest Fisheries Science Center facilitates backup and recovery of all data and IT components which are managed by IT Operations through the capture of static (point-in-time) backup data to physical media. Once data is captured to physical media (every 1-3 days), a duplicate is made and routinely (weekly) transported to an offsite archive facility where it is maintained throughout the data's applicable life-cycle. |
Lineage
Lineage Statement: |
Allele frequency and genotypic data generated from DNA sequence. These data were collected and processed in accordance with established protocols and best practices under the direction of the project’s Principal Investigator. Contact the dataset Data Manager for full QA/QC methodology. |
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Catalog Details
Catalog Item ID: | 18061 |
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GUID: | gov.noaa.nmfs.inport:18061 |
Metadata Record Created By: | Jeffrey W Cowen |
Metadata Record Created: | 2013-02-01 16:44+0000 |
Metadata Record Last Modified By: | SysAdmin InPortAdmin |
Metadata Record Last Modified: | 2022-08-09 17:11+0000 |
Metadata Record Published: | 2019-06-04 |
Owner Org: | NWFSC |
Metadata Publication Status: | Published Externally |
Do Not Publish?: | N |
Metadata Last Review Date: | 2019-06-04 |
Metadata Review Frequency: | 1 Year |
Metadata Next Review Date: | 2020-06-04 |