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Short Citation:
Alaska Fisheries Science Center, 2021: AFSC/ABL: 2007-2013 Chinook Salmon Bycatch Sample, https://www.fisheries.noaa.gov/inport/item/23652.

Item Identification

Title: AFSC/ABL: 2007-2013 Chinook Salmon Bycatch Sample
Short Name: AFSC/ABL: 2007-2013 Chinook Salmon Bycatch Sample
Status: Completed
Publication Date: 2010
Abstract:

A genetic analyses of samples from the Chinook salmon (Oncorhynchus tshawytscha) bycatch from the 2007-2013 Bering Sea-Aleutian Island and Gulf of Alaska trawl fisheries for walleye pollock (Gadus chalcogrammus) were undertaken to determine the overall stock composition of the bycatch. Samples were genotyped for 43 single nucleotide polymorphism (SNP) DNA markers and results were estimated using the Alaska Department of Fish and Game (ADF&G) SNP baseline.

Purpose:

This dataset contains SNP DNA markers for Chinook salmon bycatch.

Notes:

Loaded by FGDC Metadata Uploader, batch 5531, 03-06-2015 18:29

The following FGDC sections are not currently supported in InPort, but were preserved and will be included in the FGDC export:

- Taxonomy (FGDC:taxonomy)

- Lineage (FGDC:lineage)

Keywords

Theme Keywords

Thesaurus Keyword
UNCONTROLLED
ISO 19115 Topic Categories 002
ISO 19115 Topic Categories Biota
None bycatch
None genetics

Spatial Keywords

Thesaurus Keyword
UNCONTROLLED
Geographic Names Information System Alaska
Geographic Names Information System Bering Sea
Geographic Names Information System Gulf of Alaska

Physical Location

Organization: Auke Bay Laboratories
City: Juneau
State/Province: AK
Country: US

Data Set Information

Data Set Scope Code: Data Set
Maintenance Frequency: None Planned
Data Presentation Form: maps and data
Entity Attribute Overview:

Alleles for 43 single nucleotide polymorphisms in standard coastwide format of the Alaska Department of Fish and Game Baseline salmon baseline.

Entity Attribute Detail Citation:

AFSC

Distribution Liability:

The user is responsible for the results of any application of this data for other than its intended purpose.

Data Set Credit: National Marine Fisheries Service, Alaska Fisheries Science Centers Observer Program, ADF&G.

Support Roles

Data Steward

CC ID: 198586
Date Effective From: 2015-04-01
Date Effective To:
Contact (Person): Kondzela, Chris
Email Address: Chris.Kondzela@noaa.gov

Distributor

CC ID: 189654
Date Effective From: 2015-03-06
Date Effective To:
Contact (Person): Kondzela, Chris
Email Address: Chris.Kondzela@noaa.gov

Metadata Contact

CC ID: 189652
Date Effective From: 2015-03-06
Date Effective To:
Contact (Person): MC, Metadata Coordinators
Email Address: AFSC.metadata@noaa.gov

Originator

CC ID: 189656
Date Effective From: 2015-03-06
Date Effective To:
Contact (Person): Kondzela, Chris
Email Address: Chris.Kondzela@noaa.gov

Point of Contact

CC ID: 189653
Date Effective From: 2015-03-06
Date Effective To:
Contact (Person): Kondzela, Chris
Email Address: Chris.Kondzela@noaa.gov

Extents

Currentness Reference: Ground Condition

Extent Group 1

Extent Group 1 / Geographic Area 1

CC ID: 189651
W° Bound: -179
E° Bound: -137
N° Bound: 73
S° Bound: 51
Description

Gulf of Alaska, Bering Sea

Extent Group 1 / Time Frame 1

CC ID: 189650
Time Frame Type: Range
Start: 2007
End: 2013

Access Information

Security Class: Unclassified
Data Access Procedure:

N/A

Data Access Constraints:

For scientific, management, and regulation compliance purposes, all data collected by observers are confidential under the Magnuson-Stevens Fishery Conservation and Management Act [bm1]; as amended, Public Law 109-479; 16 U.S.C. 1953; implemented at 50 CFR 679.50. Therefore unprocessed (raw) data can be shared only with authorized persons; however aggregated forms of the data are generally available. For scientific, management, and regulation compliance purposes, these data are confidential under the Magnuson-Stevens Fishery Conservation and Management Act; as amended, Public Law 109-479; 16 U.S.C. 1953; implemented at 50 CFR 679.50. Therefore unprocessed (raw) data can be shared only with authorized persons; however aggregated forms of the data are generally available.

Data Use Constraints:

User must read and fully comprehend the metadata prior to use. Data should not be used beyond the limits of the source scale. Acknowledgement of NOAA, as the source from which these data were obtained, in any publications and/or other representations of these data is suggested. The user must adhere to restrictions placed on publication of data by the Magnuson-Stevens Fishery Conservation and Management Act. The user is responsible for the results of any application of this data for other than its intended purpose.

Distribution Information

Distribution 1

CC ID: 233740
Download URL: https://www.ncei.noaa.gov/
Distributor:
Description:

NCEI to be determined

Technical Environment

Description:

Data resides in our progeny database, and can be exported into CSV or TXT format.

Data Quality

Completeness Report:

See logical consistency report.

Conceptual Consistency:

DNA was extracted from axillary process tissue and matrix-assisted laser desorption/ionization - time of flight (MALDI-TOF) genotyping was performed. In addition to internal MALDI-TOF chip controls, 10 previously genotyped samples were included during the analyses and resulting genotypes were compared to those from the Alaska Department of Fish and Game, which used TaqMan chemistries (Applied Biosystems).

Quality Control Procedures Employed:

Contact the dataset POC for full QA/QC methodology

Data Management

Have Resources for Management of these Data Been Identified?: Yes
Approximate Percentage of Budget for these Data Devoted to Data Management: Unknown
Do these Data Comply with the Data Access Directive?: Yes
Is Access to the Data Limited Based on an Approved Waiver?: Yes
If Distributor (Data Hosting Service) is Needed, Please Indicate: yes
Approximate Delay Between Data Collection and Dissemination: unknown
If Delay is Longer than Latency of Automated Processing, Indicate Under What Authority Data Access is Delayed:

no delay

Actual or Planned Long-Term Data Archive Location: To Be Determined
If To Be Determined, Unable to Archive, or No Archiving Intended, Explain:

NCEI site yet to be determined

Approximate Delay Between Data Collection and Archiving: unknown
How Will the Data Be Protected from Accidental or Malicious Modification or Deletion Prior to Receipt by the Archive?:

IT Security and Contingency Plan for the system establishes procedures and applies to the functions, operations, and resources necessary to recover and restore data as hosted in the Western Regional Support Center in Seattle, Washington, following a disruption.

Lineage

Lineage Statement:

Contact the dataset POC for full methodology

Child Items

Rubric scores updated every 15m

Rubric Score Type Title
Entity 2007-2013

Catalog Details

Catalog Item ID: 23652
GUID: gov.noaa.nmfs.inport:23652
Metadata Record Created By: Emily A Fergusson
Metadata Record Created: 2015-03-06 18:28+0000
Metadata Record Last Modified By: SysAdmin InPortAdmin
Metadata Record Last Modified: 2019-06-04 13:14+0000
Metadata Record Published: 2016-05-03
Owner Org: AFSC
Metadata Publication Status: Published Externally
Do Not Publish?: N
Metadata Next Review Date: 2017-05-04