Cedar River Chinook genotypes - Estimate relative reproductive success of hatchery and wild fall Chinook salmon in the Cedar River
Data Set (DS) | Northwest Fisheries Science Center (NWFSC)GUID: gov.noaa.nmfs.inport:30846 | Updated: August 9, 2022 | Published / External
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Summary
Short Citation
Northwest Fisheries Science Center, 2025: Cedar River Chinook genotypes - Estimate relative reproductive success of hatchery and wild fall Chinook salmon in the Cedar River, https://www.fisheries.noaa.gov/inport/item/30846.
Full Citation Examples
We are using genetic pedigree information to estimate the reproductive success of hatchery and wild fall-run Chinook salmon spawning in the Cedar River, Washington.
Genotypes and associated phenotypes for Cedar River Chinook salmon.
Distribution Information
-
Single nucleotide polymorphism (SNP) data from Chinook salmon sampled at Landsberg Dam on the Cedar River, WA, in 2010, 2011, and 2014 Each row in the table contains the genotype of an individual fish for 96 SNP loci.
-
Sampling information for Chinook salmon sampled at the Landsberg Da (Cedar River, WA) in 2010, 2011, and 2014. Each row contains information on one sampled fish.
-
Single nucleotide polymorphism (SNP) data from Chinook salmon sampled at Landsberg Dam on the Cedar River, WA, in 2010, 2011, and 2014 Each row in the table contains the genotype of an individual fish for 96 SNP loci.
-
Sampling information for Chinook salmon sampled at the Landsberg Da (Cedar River, WA) in 2010, 2011, and 2014. Each row contains information on one sampled fish.
NA
Child Items
| Type | Title |
|---|---|
| Entity | Chinook Genotypes Cedar River 2010, 2011, and 2014 |
| Entity | Chinook Phenotypes Cedar River 2010, 2011, and 2014 |
Contact Information
Point of Contact
Mike J Ford
Mike.Ford@noaa.gov
206-860-5612
Metadata Contact
Northwest Fisheries Science Center (NWFSC)
nmfs.nwfsc.metadata@noaa.gov
206-860-3200
NWFSC Home
Extents
-122.3062° W,
-122.3062° E,
47.6449° N,
47.6449° S
Cedar River
2015-08-10 - 2015-11-01
Item Identification
| Title: | Cedar River Chinook genotypes - Estimate relative reproductive success of hatchery and wild fall Chinook salmon in the Cedar River |
|---|---|
| Status: | Completed |
| Publication Date: | 2018-02-05 |
| Abstract: |
We are using genetic pedigree information to estimate the reproductive success of hatchery and wild fall-run Chinook salmon spawning in the Cedar River, Washington. Genotypes and associated phenotypes for Cedar River Chinook salmon. |
| Supplemental Information: |
Subject to Public Access to Research Results (PARR): Yes |
Keywords
Theme Keywords
| Thesaurus | Keyword |
|---|---|
| UNCONTROLLED | |
| None | artificial propagation |
| None | Chinook salmon |
| None | reproductive success |
Spatial Keywords
| Thesaurus | Keyword |
|---|---|
| UNCONTROLLED | |
| None | Cedar River |
Instrument Keywords
| Thesaurus | Keyword |
|---|---|
| UNCONTROLLED | |
| None | DNA Sequencer |
Physical Location
| Organization: | Northwest Fisheries Science Center |
|---|---|
| City: | Seattle |
| State/Province: | WA |
| Country: | USA |
Data Set Information
| Data Set Scope Code: | Data Set |
|---|---|
| Data Set Type: | Spreadsheet |
| Data Presentation Form: | Table (digital) |
Support Roles
Data Steward
| Date Effective From: | 2015-10-01 |
|---|---|
| Date Effective To: | |
| Contact (Person): | Ford, Mike J |
| Address: |
2725 Montlake Boulevard East Seattle, WA 98112 |
| Email Address: | Mike.Ford@noaa.gov |
| Phone: | 206-860-5612 |
Distributor
| Date Effective From: | 2015-10-01 |
|---|---|
| Date Effective To: | |
| Contact (Organization): | Northwest Fisheries Science Center (NWFSC) |
| Address: |
2725 Montlake Boulevard East Seattle, WA 98112 USA |
| Email Address: | nmfs.nwfsc.metadata@noaa.gov |
| Phone: | 206-860-3200 |
| URL: | NWFSC Home |
Metadata Contact
| Date Effective From: | 2015-10-01 |
|---|---|
| Date Effective To: | |
| Contact (Organization): | Northwest Fisheries Science Center (NWFSC) |
| Address: |
2725 Montlake Boulevard East Seattle, WA 98112 USA |
| Email Address: | nmfs.nwfsc.metadata@noaa.gov |
| Phone: | 206-860-3200 |
| URL: | NWFSC Home |
Originator
| Date Effective From: | 2015-10-01 |
|---|---|
| Date Effective To: | |
| Contact (Person): | Ford, Mike J |
| Address: |
2725 Montlake Boulevard East Seattle, WA 98112 |
| Email Address: | Mike.Ford@noaa.gov |
| Phone: | 206-860-5612 |
Point of Contact
| Date Effective From: | 2015-10-01 |
|---|---|
| Date Effective To: | |
| Contact (Person): | Ford, Mike J |
| Address: |
2725 Montlake Boulevard East Seattle, WA 98112 |
| Email Address: | Mike.Ford@noaa.gov |
| Phone: | 206-860-5612 |
Extents
Extent Group 1
Extent Group 1 / Geographic Area 1
| W° Bound: | -122.3062 | |
|---|---|---|
| E° Bound: | -122.3062 | |
| N° Bound: | 47.6449 | |
| S° Bound: | 47.6449 | |
| Description |
Cedar River |
|
Extent Group 1 / Time Frame 1
| Time Frame Type: | Range |
|---|---|
| Start: | 2015-08-10 |
| End: | 2015-11-01 |
Access Information
| Security Class: | Unclassified |
|---|---|
| Data Access Procedure: |
At this time, contact the Data Manager for information on obtaining access to this data set. In the near future, the NWFSC will strive to provide all non-sensitive data resources as a web service in order to meet the NOAA Data Access Policy Directive (https://nosc.noaa.gov/EDMC/PD.DA.php). |
| Data Access Constraints: |
NA |
Distribution Information
Distribution 1
| Start Date: | 2018-02-05 |
|---|---|
| End Date: | Present |
| Download URL: | https://www.webapps.nwfsc.noaa.gov/apex/parr/chinook_genotypes_cedar_river_2010_2011_and_2014/data/page/ |
| Distributor: | Northwest Fisheries Science Center (NWFSC) (2015-10-01 - Present) |
| File Name: | Chinook Genotypes Cedar River 2010, 2011, and 2014 |
| Description: |
Single nucleotide polymorphism (SNP) data from Chinook salmon sampled at Landsberg Dam on the Cedar River, WA, in 2010, 2011, and 2014 Each row in the table contains the genotype of an individual fish for 96 SNP loci. |
Distribution 2
| Start Date: | 2018-02-05 |
|---|---|
| End Date: | Present |
| Download URL: | https://www.webapps.nwfsc.noaa.gov/apex/parr/chinook_phenotypes_cedar_river_2010_2011_and_2014/data/page/ |
| Distributor: | Northwest Fisheries Science Center (NWFSC) (2015-10-01 - Present) |
| File Name: | Chinook Phenotypes Cedar River 2010, 2011, and 201 |
| Description: |
Sampling information for Chinook salmon sampled at the Landsberg Da (Cedar River, WA) in 2010, 2011, and 2014. Each row contains information on one sampled fish. |
Distribution 3
| Start Date: | 2018-02-05 |
|---|---|
| End Date: | Present |
| Download URL: | https://www.webapps.nwfsc.noaa.gov/apex/parrdata/inventory/tables/table/chinook_genotypes_cedar_river_2010_2011_and_2014 |
| Distributor: | Northwest Fisheries Science Center (NWFSC) (2015-10-01 - Present) |
| File Name: | Chinook Genotypes Cedar River 2010, 2011, and 2014 |
| Description: |
Single nucleotide polymorphism (SNP) data from Chinook salmon sampled at Landsberg Dam on the Cedar River, WA, in 2010, 2011, and 2014 Each row in the table contains the genotype of an individual fish for 96 SNP loci. |
Distribution 4
| Start Date: | 2018-02-05 |
|---|---|
| End Date: | Present |
| Download URL: | https://www.webapps.nwfsc.noaa.gov/apex/parrdata/inventory/tables/table/chinook_phenotypes_cedar_river_2010_2011_and_2014 |
| Distributor: | Northwest Fisheries Science Center (NWFSC) (2015-10-01 - Present) |
| File Name: | Chinook Phenotypes Cedar River 2010, 2011, and 201 |
| Description: |
Sampling information for Chinook salmon sampled at the Landsberg Da (Cedar River, WA) in 2010, 2011, and 2014. Each row contains information on one sampled fish. |
URLs
URL 1
| URL: | https://www.webapps.nwfsc.noaa.gov/apex/parrdata/inventory/datasets/dataset/94979 |
|---|---|
| Name: | Cedar River Chinook genotypes |
| URL Type: |
Online Resource
|
| File Resource Format: | Web site |
| Description: |
NWFSC Dataset Information page. Genotypes and associated phenotypes for Cedar River Chinook salmon |
Data Quality
| Quality Control Procedures Employed: |
These data were collected and processed in accordance with established protocols and best practices under the direction of the project’s Principal Investigator. Contact the dataset Data Manager in section 3 for full QA/QC methodology. |
|---|
Data Management
| Have Resources for Management of these Data Been Identified?: | No |
|---|---|
| Approximate Percentage of Budget for these Data Devoted to Data Management: | 0 |
| Do these Data Comply with the Data Access Directive?: | No |
| Is Access to the Data Limited Based on an Approved Waiver?: | No |
| If Distributor (Data Hosting Service) is Needed, Please Indicate: | No |
| Approximate Delay Between Data Collection and Dissemination: | 0 days |
| If Delay is Longer than Latency of Automated Processing, Indicate Under What Authority Data Access is Delayed: |
No Delay |
| Actual or Planned Long-Term Data Archive Location: | NCEI-MD |
| Approximate Delay Between Data Collection and Archiving: | 365 |
| How Will the Data Be Protected from Accidental or Malicious Modification or Deletion Prior to Receipt by the Archive?: |
The Northwest Fisheries Science Center facilitates backup and recovery of all data and IT components which are managed by IT Operations through the capture of static (point-in-time) backup data to physical media. Once data is captured to physical media (every 1-3 days), a duplicate is made and routinely (weekly) transported to an offsite archive facility where it is maintained throughout the data's applicable life-cycle. |
Lineage
| Lineage Statement: |
DNA genotyping: These data were collected and processed in accordance with established protocols and best practices under the direction of the project’s Principal Investigator. Contact the dataset Data Manager for full QA/QC methodology. |
|---|
Child Items
Rubric scores updated every 15m
|
Type | Title |
|---|---|---|
| Entity | Chinook Genotypes Cedar River 2010, 2011, and 2014 | |
| Entity | Chinook Phenotypes Cedar River 2010, 2011, and 2014 |
Catalog Details
| Catalog Item ID: | 30846 |
|---|---|
| GUID: | gov.noaa.nmfs.inport:30846 |
| Metadata Record Created By: | Jeffrey W Cowen |
| Metadata Record Created: | 2016-02-23 16:11+0000 |
| Metadata Record Last Modified By: | SysAdmin InPortAdmin |
| Metadata Record Last Modified: | 2022-08-09 17:11+0000 |
| Metadata Record Published: | 2019-06-04 |
| Owner Org: | NWFSC |
| Metadata Publication Status: | Published Externally |
| Do Not Publish?: | N |
| Metadata Last Review Date: | 2019-06-04 |
| Metadata Review Frequency: | 1 Year |
| Metadata Next Review Date: | 2020-06-04 |