HISTOLOGY
Entity (ENT) | Northeast Fisheries Science Center (NEFSC)GUID: gov.noaa.nmfs.inport:35893 | Updated: August 9, 2022 | Published / External
Item Identification
| Title: | HISTOLOGY |
|---|---|
| Short Name: | HISTOLOGY |
| Status: | Completed |
| Abstract: |
Data collected from gonad histology slides with characters and values unique to each sex and species. Table structure, columns, and species-sex specific values under development still. |
Entity Information
| Entity Type: | Data Table |
|---|---|
| Active Version?: | Yes |
| Description: |
Data collected from gonad histology slides with characters and values unique to each sex and species. Table structure, columns, and species-sex specific values under development still. |
Data Attributes
Attribute Summary
|
|
Name | Type | Description |
|---|---|---|---|---|
|
100
|
|
FISH_ID_CODE | VARCHAR2 | Unique code for each sampled fish. |
|
100
|
MAOS | VARCHAR2 | Most advanced oocyte stage | |
|
100
|
POF | NUMBER | Under development | |
|
100
|
POF_PRESENCE | CHAR | Under development | |
|
100
|
CYSTS | CHAR | Under development | |
|
100
|
ATRESIA | VARCHAR2 | Under development | |
|
100
|
ATRESIA_TYPE | VARCHAR2 | Under development | |
|
100
|
TUNICA_THICKNESS_CATEGORY | CHAR | Under development | |
|
100
|
TUNICA_THICKNESS | NUMBER | Under development | |
|
100
|
STROMA | VARCHAR2 | Under development | |
|
100
|
COMMENTS | VARCHAR2 | Comments field for the gonad histology slide | |
|
100
|
HISTOLOGY_GONAD_CLASS | CHAR | Under development | |
|
100
|
CYSTS_COMMENT | VARCHAR2 | Under development | |
|
100
|
OVARY_LOBE | CHAR | Ovary lobe for a subsample: RIGHT or LEFT | |
|
100
|
OVARY_LOCATION | CHAR | Region within ovary subsample was taken: ANTERIOR, MIDDLE, POSTERIOR | |
|
100
|
SLIDE_QUALITY | VARCHAR2 | Quality of slide: null or UNREADABLE | |
|
100
|
PICTURES_TAKEN | CHAR | Binary (Y/N) flag indicating if any photographs were taken of the gonad histology section | |
|
100
|
|
SAMPLE_ID | NUMBER | Sequential identifier assigned for each subsample (slide) examined for each specimen |
Attribute Details
FISH_ID_CODE
CC ID: 362231
| Seq. Order: | 1 |
|---|---|
| Data Storage Type: | VARCHAR2 |
| Max Length: | 20 |
| Required: | Yes |
| Primary Key: | Yes |
| Status: | Active |
| Description: |
Unique code for each sampled fish. |
| General Data Type: | VARCHAR2 |
| Foreign Key Relations: |
FISH_ORGANISM.FISH_ID_CODE |
MAOS
CC ID: 362232
| Seq. Order: | 2 |
|---|---|
| Data Storage Type: | VARCHAR2 |
| Max Length: | 3 |
| Required: | No |
| Primary Key: | No |
| Status: | Active |
| Description: |
Most advanced oocyte stage |
| General Data Type: | VARCHAR2 |
POF
CC ID: 362233
| Seq. Order: | 3 |
|---|---|
| Data Storage Type: | NUMBER |
| Max Length: | 22 |
| Required: | No |
| Primary Key: | No |
| Precision: | 1 |
| Scale: | 0 |
| Status: | Active |
| Description: |
Under development |
| General Data Type: | NUMBER |
POF_PRESENCE
CC ID: 362234
| Seq. Order: | 4 |
|---|---|
| Data Storage Type: | CHAR |
| Max Length: | 1 |
| Required: | No |
| Primary Key: | No |
| Status: | Active |
| Description: |
Under development |
| General Data Type: | CHAR |
CYSTS
CC ID: 362235
| Seq. Order: | 5 |
|---|---|
| Data Storage Type: | CHAR |
| Max Length: | 1 |
| Required: | No |
| Primary Key: | No |
| Status: | Active |
| Description: |
Under development |
| General Data Type: | CHAR |
ATRESIA
CC ID: 362236
| Seq. Order: | 6 |
|---|---|
| Data Storage Type: | VARCHAR2 |
| Max Length: | 5 |
| Required: | No |
| Primary Key: | No |
| Status: | Active |
| Description: |
Under development |
| General Data Type: | VARCHAR2 |
ATRESIA_TYPE
CC ID: 362237
| Seq. Order: | 7 |
|---|---|
| Data Storage Type: | VARCHAR2 |
| Max Length: | 5 |
| Required: | No |
| Primary Key: | No |
| Status: | Active |
| Description: |
Under development |
| General Data Type: | VARCHAR2 |
TUNICA_THICKNESS_CATEGORY
CC ID: 362238
| Seq. Order: | 8 |
|---|---|
| Data Storage Type: | CHAR |
| Max Length: | 1 |
| Required: | No |
| Primary Key: | No |
| Status: | Active |
| Description: |
Under development |
| General Data Type: | CHAR |
TUNICA_THICKNESS
CC ID: 362239
| Seq. Order: | 9 |
|---|---|
| Data Storage Type: | NUMBER |
| Max Length: | 22 |
| Required: | No |
| Primary Key: | No |
| Precision: | 38 |
| Scale: | 3 |
| Status: | Active |
| Description: |
Under development |
| General Data Type: | NUMBER |
STROMA
CC ID: 362240
| Seq. Order: | 10 |
|---|---|
| Data Storage Type: | VARCHAR2 |
| Max Length: | 10 |
| Required: | No |
| Primary Key: | No |
| Status: | Active |
| Description: |
Under development |
| General Data Type: | VARCHAR2 |
COMMENTS
CC ID: 362241
| Seq. Order: | 11 |
|---|---|
| Data Storage Type: | VARCHAR2 |
| Max Length: | 500 |
| Required: | No |
| Primary Key: | No |
| Status: | Active |
| Description: |
Comments field for the gonad histology slide |
| General Data Type: | VARCHAR2 |
HISTOLOGY_GONAD_CLASS
CC ID: 362242
| Seq. Order: | 12 |
|---|---|
| Data Storage Type: | CHAR |
| Max Length: | 1 |
| Required: | No |
| Primary Key: | No |
| Status: | Active |
| Description: |
Under development |
| General Data Type: | CHAR |
CYSTS_COMMENT
CC ID: 362243
| Seq. Order: | 13 |
|---|---|
| Data Storage Type: | VARCHAR2 |
| Max Length: | 500 |
| Required: | No |
| Primary Key: | No |
| Status: | Active |
| Description: |
Under development |
| General Data Type: | VARCHAR2 |
OVARY_LOBE
CC ID: 362244
| Seq. Order: | 14 |
|---|---|
| Data Storage Type: | CHAR |
| Max Length: | 1 |
| Required: | No |
| Primary Key: | No |
| Status: | Active |
| Description: |
Ovary lobe for a subsample: RIGHT or LEFT |
| General Data Type: | CHAR |
OVARY_LOCATION
CC ID: 362245
| Seq. Order: | 15 |
|---|---|
| Data Storage Type: | CHAR |
| Max Length: | 1 |
| Required: | No |
| Primary Key: | No |
| Status: | Active |
| Description: |
Region within ovary subsample was taken: ANTERIOR, MIDDLE, POSTERIOR |
| General Data Type: | CHAR |
SLIDE_QUALITY
CC ID: 362246
| Seq. Order: | 16 |
|---|---|
| Data Storage Type: | VARCHAR2 |
| Max Length: | 10 |
| Required: | No |
| Primary Key: | No |
| Status: | Active |
| Description: |
Quality of slide: null or UNREADABLE |
| General Data Type: | VARCHAR2 |
PICTURES_TAKEN
CC ID: 362247
| Seq. Order: | 17 |
|---|---|
| Data Storage Type: | CHAR |
| Max Length: | 1 |
| Required: | No |
| Primary Key: | No |
| Status: | Active |
| Description: |
Binary (Y/N) flag indicating if any photographs were taken of the gonad histology section |
| General Data Type: | CHAR |
SAMPLE_ID
CC ID: 362248
| Seq. Order: | 18 |
|---|---|
| Data Storage Type: | NUMBER |
| Max Length: | 22 |
| Required: | Yes |
| Primary Key: | Yes |
| Status: | Active |
| Description: |
Sequential identifier assigned for each subsample (slide) examined for each specimen |
| General Data Type: | NUMBER |
Catalog Details
| Catalog Item ID: | 35893 |
|---|---|
| GUID: | gov.noaa.nmfs.inport:35893 |
| Metadata Record Created By: | Patricia L Jones |
| Metadata Record Created: | 2016-12-07 13:27+0000 |
| Metadata Record Last Modified By: | SysAdmin InPortAdmin |
| Metadata Record Last Modified: | 2022-08-09 17:11+0000 |
| Metadata Record Published: | 2016-12-12 |
| Owner Org: | NEFSC |
| Metadata Publication Status: | Published Externally |
| Do Not Publish?: | N |
| Metadata Last Review Date: | 2016-12-12 |
| Metadata Review Frequency: | 1 Year |
| Metadata Next Review Date: | 2017-12-12 |