ESD_BIA_CNET_ANALYSIS_Climate_DataDictionary_MARIAN_2022
Entity (ENT) | Pacific Islands Fisheries Science Center (PIFSC)GUID: gov.noaa.nmfs.inport:36150 | Updated: June 26, 2023 | Published / External
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Summary
Data dictionary of benthic cover dataset. Describes benthic image analysis results from site imagery using the CoralNet annotation tool, and includes the mission and site-specific information.
Entity Information
Entity Type
Data Table
Data Attribute / Type | Description |
---|---|
ROUNDID
NUMERIC |
Unique Identifier for MISSIONID auto-assigned by database for ROUND record (corresponds to mission, cruise, cruise leg, etc.). |
MISSIONID
TEXT |
Mission Identifier. |
REGION_NAME
TEXT |
The name of the region surveyed in the Pacific Islands region: American Samoa, Pacific Remote Island Areas, Mariana Archipelago, main Hawaiian Islands, Northwestern Hawaiian Islands. |
ISLAND
TEXT |
Name of island or atoll surveyed in the Pacific Islands region (REGION_NAME). |
SITE
TEXT |
The code for the site surveyed at the island or atoll (ISLAND). Combines a 3-letter island code with a 2-5 digit site number, separated by a hyphen. |
SITEVISITID
NUMERIC |
Unique identifier created each time a SITE is surveyed on a DATE_. |
OCC_SITEID
TEXT |
Fixed site identifier; fixed sites are established for oceanography surveys conducted by the ESD's Ocean and Climate Change Team. |
LATITUDE
NUMERIC |
Latitude in decimal degrees, WGS84, for the given SITE. |
LONGITUDE
NUMERIC |
Longitude in decimal degrees, WGS84 for the given SITE. |
PERM_SITE
NUMERIC |
Flag for permanent site (-1), typically established in the early years of the Pacific Reef Assessment and Monitoring Program. A varying subset of the activities conducted at CLIMATE_STATIONS are conducted at permanent sites. |
CLIMATE_STATION_YN
NUMERIC |
Flag for NCRMP climate station (-1). Typically, 3-4 climate stations were selected in a stratified random fashion to be roughly equally spaced around the island/atoll, along the 15-m contour, on hard bottom, and at least 1-km away from a river mouth or embayment (if relevant to the island/atoll). Multiple features of the coral reef environment are assessed at climate stations, including in-situ water temperature using subsurface temperature recorders (STRs), seawater carbonate chemistry from water samples, net carbonate accretion using calcification accretion units (CAUs), bioerosion using bioerosion monitoring units (BMUs), and cryptobiota diversity using autonomous reef monitoring structures (ARMS). |
DATE_
DATE |
Date the survey was conducted (d-mmm-yy). |
IMAGE_NAME
TEXT |
Image name (SITE_YEAR_REP_PHOTOID). |
OBS_YEAR
TEXT |
4-digit year the survey was conducted (DATE_). |
REPLICATE
TEXT |
Letter associated to replicate / transect for the survey. In 2013 and 2016, Rep A is for reef fish surveys and Rep A or B is for coral demographic surveys. In 2019, all fish and coral surveys are rep A. If no letter, it refers to photo number: Photo 1-9 = 0 Photo 10-19 = 1 Photo 20-29 = 2 Photo 30-39 = 3 |
PHOTOID
TEXT |
Sequential image number along transect, usually 1-30, though some sites may have less than or exceed 30 images. |
ANALYST
TEXT |
Username of the person that annotated the images. The analyst for automated annotations (as opposed to annotations generated by humans) is ALLEVIATE (aka the CoralNet Robot). |
TIER_1
TEXT |
Code for CATEGORY NAME. |
CATEGORY_NAME
TEXT |
Category classification for the point on the analyzed image (X POS, Y POS). Taxa/functional group includes: coral, coralline alga, macroalga, mobile fauna, sediment, sessile invertebrate, soft coral, tape and wand, turf alga, and unclassified. |
TIER_2
TEXT |
Code for SUBCATEGORY NAME. |
SUBCATEGORY_NAME
TEXT |
Subcategory classification name for the point on the analyzed image (X POS, Y POS). Includes morphology for hard corals and functional groups (giant clam, zoanthid, etc.) |
TIER_3
TEXT |
Code for GENERA NAME. |
GENERA_NAME
TEXT |
Genus taxonomic name for the point on the analyzed image (X POS, Y POS) or the subcategory classification/description. |
X_POS
NUMERIC |
X position of the analyzed point on the image. |
Y_POS
NUMERIC |
Y position of the analyzed point on the image. |
SURVEY_TYPE
TEXT |
Identifies the ESD team that conducted the survey, typically 'Fish' or 'Benthic' for stratified random surveys, or 'Oceanography' for climate surveys at permanent sites. |
Child Items
No Child Items for this record.
Contact Information
No contact information is available for this record.
Please contact the owner organization (PIFSC) for inquiries on this record.
Item Identification
Title: | ESD_BIA_CNET_ANALYSIS_Climate_DataDictionary_MARIAN_2022 |
---|---|
Short Name: | BIA_CNET_Climate_DataDictionary |
Status: | Completed |
Entity Information
Entity Type: | Data Table |
---|---|
Active Version?: | Yes |
Description: |
Data dictionary of benthic cover dataset. Describes benthic image analysis results from site imagery using the CoralNet annotation tool, and includes the mission and site-specific information. |
Change Summary: |
Updated in 2023 to include column SITEVISITID. In 2023 columns PERM_SITE and CLIMATE_STATION_YN were irrelevant and excluded -- all data was from fixed sites. |
Data Attributes
Attribute Summary
Name | Type | Description | ||
---|---|---|---|---|
100
|
ROUNDID | NUMERIC | Unique Identifier for MISSIONID auto-assigned by database for ROUND record (corresponds to mission, cruise, cruise leg, etc.). | |
100
|
MISSIONID | TEXT | Mission Identifier. | |
100
|
REGION_NAME | TEXT | The name of the region surveyed in the Pacific Islands region: American Samoa, Pacific Remote Island Areas, Mariana Archipelago, main Hawaiian Islands, Northwestern Hawaiian Islands. | |
100
|
ISLAND | TEXT | Name of island or atoll surveyed in the Pacific Islands region (REGION_NAME). | |
100
|
SITE | TEXT | The code for the site surveyed at the island or atoll (ISLAND). Combines a 3-letter island code with a 2-5 digit site number, separated by a hyphen. | |
100
|
SITEVISITID | NUMERIC | Unique identifier created each time a SITE is surveyed on a DATE_. | |
100
|
OCC_SITEID | TEXT | Fixed site identifier; fixed sites are established for oceanography surveys conducted by the ESD's Ocean and Climate Change Team. | |
100
|
LATITUDE | NUMERIC | Latitude in decimal degrees, WGS84, for the given SITE. | |
100
|
LONGITUDE | NUMERIC | Longitude in decimal degrees, WGS84 for the given SITE. | |
100
|
PERM_SITE | NUMERIC | Flag for permanent site (-1), typically established in the early years of the Pacific Reef Assessment and Monitoring Program. A varying subset of the activities conducted at CLIMATE_STATIONS are conducted at permanent sites. | |
100
|
CLIMATE_STATION_YN | NUMERIC | Flag for NCRMP climate station (-1). Typically, 3-4 climate stations were selected in a stratified random fashion to be roughly equally spaced around the island/atoll, along the 15-m contour, on hard bottom, and at least 1-km away from a river mouth or embayment (if relevant to the island/atoll). Multiple features of the coral reef environment are assessed at climate stations, including in-situ water temperature using subsurface temperature recorders (STRs), seawater carbonate chemistry from water samples, net carbonate accretion using calcification accretion units (CAUs), bioerosion using bioerosion monitoring units (BMUs), and cryptobiota diversity using autonomous reef monitoring structures (ARMS). | |
100
|
DATE_ | DATE | Date the survey was conducted (d-mmm-yy). | |
100
|
IMAGE_NAME | TEXT | Image name (SITE_YEAR_REP_PHOTOID). | |
100
|
OBS_YEAR | TEXT | 4-digit year the survey was conducted (DATE_). | |
100
|
REPLICATE | TEXT | Letter associated to replicate / transect for the survey. In 2013 and 2016, Rep A is for reef fish surveys and Rep A or B is for coral demographic surveys. In 2019, all fish and coral surveys are rep A. If no letter, it refers to photo number: Photo 1-9 = 0 Photo 10-19 = 1 Photo 20-29 = 2 Photo 30-39 = 3 | |
100
|
PHOTOID | TEXT | Sequential image number along transect, usually 1-30, though some sites may have less than or exceed 30 images. | |
100
|
ANALYST | TEXT | Username of the person that annotated the images. The analyst for automated annotations (as opposed to annotations generated by humans) is ALLEVIATE (aka the CoralNet Robot). | |
100
|
TIER_1 | TEXT | Code for CATEGORY NAME. | |
100
|
CATEGORY_NAME | TEXT | Category classification for the point on the analyzed image (X POS, Y POS). Taxa/functional group includes: coral, coralline alga, macroalga, mobile fauna, sediment, sessile invertebrate, soft coral, tape and wand, turf alga, and unclassified. | |
100
|
TIER_2 | TEXT | Code for SUBCATEGORY NAME. | |
100
|
SUBCATEGORY_NAME | TEXT | Subcategory classification name for the point on the analyzed image (X POS, Y POS). Includes morphology for hard corals and functional groups (giant clam, zoanthid, etc.) | |
100
|
TIER_3 | TEXT | Code for GENERA NAME. | |
100
|
GENERA_NAME | TEXT | Genus taxonomic name for the point on the analyzed image (X POS, Y POS) or the subcategory classification/description. | |
100
|
X_POS | NUMERIC | X position of the analyzed point on the image. | |
100
|
Y_POS | NUMERIC | Y position of the analyzed point on the image. | |
100
|
SURVEY_TYPE | TEXT | Identifies the ESD team that conducted the survey, typically 'Fish' or 'Benthic' for stratified random surveys, or 'Oceanography' for climate surveys at permanent sites. |
Attribute Details
ROUNDID
Seq. Order: | 1 |
---|---|
Data Storage Type: | NUMERIC |
Max Length: | 22 |
Required: | Yes |
Primary Key: | No |
Precision: | 28 |
Scale: | 0 |
Status: | Active |
Description: |
Unique Identifier for MISSIONID auto-assigned by database for ROUND record (corresponds to mission, cruise, cruise leg, etc.). |
MISSIONID
Seq. Order: | 2 |
---|---|
Data Storage Type: | TEXT |
Max Length: | 30 |
Required: | Yes |
Primary Key: | No |
Status: | Active |
Description: |
Mission Identifier. |
REGION_NAME
Seq. Order: | 3 |
---|---|
Data Storage Type: | TEXT |
Max Length: | 30 |
Required: | No |
Primary Key: | No |
Status: | Active |
Description: |
The name of the region surveyed in the Pacific Islands region: American Samoa, Pacific Remote Island Areas, Mariana Archipelago, main Hawaiian Islands, Northwestern Hawaiian Islands. |
ISLAND
Seq. Order: | 4 |
---|---|
Data Storage Type: | TEXT |
Max Length: | 150 |
Required: | No |
Primary Key: | No |
Status: | Active |
Description: |
Name of island or atoll surveyed in the Pacific Islands region (REGION_NAME). |
SITE
Seq. Order: | 5 |
---|---|
Data Storage Type: | TEXT |
Max Length: | 150 |
Required: | No |
Primary Key: | No |
Status: | Active |
Description: |
The code for the site surveyed at the island or atoll (ISLAND). Combines a 3-letter island code with a 2-5 digit site number, separated by a hyphen. |
SITEVISITID
Seq. Order: | 6 |
---|---|
Data Storage Type: | NUMERIC |
Required: | No |
Primary Key: | No |
Status: | Active |
Description: |
Unique identifier created each time a SITE is surveyed on a DATE_. |
OCC_SITEID
Seq. Order: | 7 |
---|---|
Data Storage Type: | TEXT |
Required: | No |
Primary Key: | No |
Status: | Active |
Description: |
Fixed site identifier; fixed sites are established for oceanography surveys conducted by the ESD's Ocean and Climate Change Team. |
LATITUDE
Seq. Order: | 8 |
---|---|
Data Storage Type: | NUMERIC |
Max Length: | 22 |
Required: | No |
Primary Key: | No |
Precision: | 38 |
Scale: | 8 |
Status: | Active |
Description: |
Latitude in decimal degrees, WGS84, for the given SITE. |
LONGITUDE
Seq. Order: | 9 |
---|---|
Data Storage Type: | NUMERIC |
Max Length: | 22 |
Required: | No |
Primary Key: | No |
Precision: | 28 |
Scale: | 8 |
Status: | Active |
Description: |
Longitude in decimal degrees, WGS84 for the given SITE. |
PERM_SITE
Seq. Order: | 12 |
---|---|
Data Storage Type: | NUMERIC |
Max Length: | 22 |
Required: | No |
Primary Key: | No |
Precision: | 5 |
Scale: | 0 |
Status: | Active |
Description: |
Flag for permanent site (-1), typically established in the early years of the Pacific Reef Assessment and Monitoring Program. A varying subset of the activities conducted at CLIMATE_STATIONS are conducted at permanent sites. |
CLIMATE_STATION_YN
Seq. Order: | 13 |
---|---|
Data Storage Type: | NUMERIC |
Max Length: | 22 |
Required: | No |
Primary Key: | No |
Status: | Active |
Description: |
Flag for NCRMP climate station (-1). Typically, 3-4 climate stations were selected in a stratified random fashion to be roughly equally spaced around the island/atoll, along the 15-m contour, on hard bottom, and at least 1-km away from a river mouth or embayment (if relevant to the island/atoll). Multiple features of the coral reef environment are assessed at climate stations, including in-situ water temperature using subsurface temperature recorders (STRs), seawater carbonate chemistry from water samples, net carbonate accretion using calcification accretion units (CAUs), bioerosion using bioerosion monitoring units (BMUs), and cryptobiota diversity using autonomous reef monitoring structures (ARMS). |
DATE_
Seq. Order: | 16 |
---|---|
Data Storage Type: | DATE |
Max Length: | 7 |
Required: | Yes |
Primary Key: | No |
Status: | Active |
Description: |
Date the survey was conducted (d-mmm-yy). |
IMAGE_NAME
Seq. Order: | 17 |
---|---|
Data Storage Type: | TEXT |
Max Length: | 4000 |
Required: | No |
Primary Key: | No |
Status: | Active |
Description: |
Image name (SITE_YEAR_REP_PHOTOID). |
OBS_YEAR
Seq. Order: | 18 |
---|---|
Data Storage Type: | TEXT |
Max Length: | 16 |
Required: | No |
Primary Key: | No |
Status: | Active |
Description: |
4-digit year the survey was conducted (DATE_). |
REPLICATE
Seq. Order: | 19 |
---|---|
Data Storage Type: | TEXT |
Max Length: | 4 |
Required: | No |
Primary Key: | No |
Status: | Active |
Description: |
Letter associated to replicate / transect for the survey. In 2013 and 2016, Rep A is for reef fish surveys and Rep A or B is for coral demographic surveys. In 2019, all fish and coral surveys are rep A. If no letter, it refers to photo number: Photo 1-9 = 0 Photo 10-19 = 1 Photo 20-29 = 2 Photo 30-39 = 3 |
PHOTOID
Seq. Order: | 20 |
---|---|
Data Storage Type: | TEXT |
Max Length: | 4000 |
Required: | No |
Primary Key: | No |
Status: | Active |
Description: |
Sequential image number along transect, usually 1-30, though some sites may have less than or exceed 30 images. |
ANALYST
Seq. Order: | 21 |
---|---|
Data Storage Type: | TEXT |
Max Length: | 20 |
Required: | No |
Primary Key: | No |
Status: | Active |
Description: |
Username of the person that annotated the images. The analyst for automated annotations (as opposed to annotations generated by humans) is ALLEVIATE (aka the CoralNet Robot). |
TIER_1
Seq. Order: | 22 |
---|---|
Data Storage Type: | TEXT |
Max Length: | 5 |
Required: | No |
Primary Key: | No |
Status: | Active |
Description: |
Code for CATEGORY NAME. |
CATEGORY_NAME
Seq. Order: | 23 |
---|---|
Data Storage Type: | TEXT |
Max Length: | 20 |
Required: | No |
Primary Key: | No |
Status: | Active |
Description: |
Category classification for the point on the analyzed image (X POS, Y POS). Taxa/functional group includes: coral, coralline alga, macroalga, mobile fauna, sediment, sessile invertebrate, soft coral, tape and wand, turf alga, and unclassified. |
TIER_2
Seq. Order: | 24 |
---|---|
Data Storage Type: | TEXT |
Max Length: | 5 |
Required: | No |
Primary Key: | No |
Status: | Active |
Description: |
Code for SUBCATEGORY NAME. |
SUBCATEGORY_NAME
Seq. Order: | 25 |
---|---|
Data Storage Type: | TEXT |
Max Length: | 50 |
Required: | No |
Primary Key: | No |
Status: | Active |
Description: |
Subcategory classification name for the point on the analyzed image (X POS, Y POS). Includes morphology for hard corals and functional groups (giant clam, zoanthid, etc.) |
TIER_3
Seq. Order: | 26 |
---|---|
Data Storage Type: | TEXT |
Max Length: | 5 |
Required: | No |
Primary Key: | No |
Status: | Active |
Description: |
Code for GENERA NAME. |
GENERA_NAME
Seq. Order: | 27 |
---|---|
Data Storage Type: | TEXT |
Max Length: | 50 |
Required: | No |
Primary Key: | No |
Status: | Active |
Description: |
Genus taxonomic name for the point on the analyzed image (X POS, Y POS) or the subcategory classification/description. |
X_POS
Seq. Order: | 28 |
---|---|
Data Storage Type: | NUMERIC |
Max Length: | 22 |
Required: | No |
Primary Key: | No |
Precision: | 38 |
Status: | Active |
Description: |
X position of the analyzed point on the image. |
Y_POS
Seq. Order: | 29 |
---|---|
Data Storage Type: | NUMERIC |
Max Length: | 22 |
Required: | No |
Primary Key: | No |
Status: | Active |
Description: |
Y position of the analyzed point on the image. |
SURVEY_TYPE
Seq. Order: | 30 |
---|---|
Data Storage Type: | TEXT |
Required: | No |
Primary Key: | No |
Status: | Active |
Description: |
Identifies the ESD team that conducted the survey, typically 'Fish' or 'Benthic' for stratified random surveys, or 'Oceanography' for climate surveys at permanent sites. |
Catalog Details
Catalog Item ID: | 36150 |
---|---|
GUID: | gov.noaa.nmfs.inport:36150 |
Metadata Record Created By: | Troy T Kanemura |
Metadata Record Created: | 2016-12-30 15:22+0000 |
Metadata Record Last Modified By: | Lori H Luers |
Metadata Record Last Modified: | 2023-06-26 19:04+0000 |
Metadata Record Published: | 2023-06-26 |
Owner Org: | PIFSC |
Metadata Publication Status: | Published Externally |
Do Not Publish?: | N |
Metadata Last Review Date: | 2020-08-17 |
Metadata Review Frequency: | 1 Year |
Metadata Next Review Date: | 2021-08-17 |