Oregon ESA 2010 BKD vertical transmission - Test of analyses for bacterial kidney disease as predictors of vertical transmission
Data Set (DS) | Northwest Fisheries Science Center (NWFSC)GUID: gov.noaa.nmfs.inport:18568 | Updated: August 9, 2022 | Published / External
Summary
Short Citation
Northwest Fisheries Science Center, 2024: Oregon ESA 2010 BKD vertical transmission - Test of analyses for bacterial kidney disease as predictors of vertical transmission, https://www.fisheries.noaa.gov/inport/item/18568.
Full Citation Examples
Although the pathogen causing bacterial kidney disease is known to be transmitted from broodstock female to offspring, there is large uncertainty around the likelihood of vertical transmission. Identifying predictors of transmission by analyzing broodstock tissues for pathogen presence would provide an important management tool for hatcheries and captive broodstock programs.
This project assesses a suite of analytical methods for predictive utility by evaluating broodstock and following the infection fate of their offspring. In addition to measuring fork length (mm) & weight (g) of individual offspring, kidney tissue is analyzed for Renibacterium salmoninarum by enzyme-linked immunoassay (ELISA), fluorescent antibody microscopy, and duplex quantitative real-time polymerase chain reaction (qPCR). Individual fish data are recorded by spreadsheet. This project is conducted by Oregon Department of Fish & Wildlife in collaboration with NOAA personnel. This is a self-contained project.
BKD vertical transmission lab analyses results.
Distribution Information
-
http://www.ncei.noaa.gov
NA
Child Items
No Child Items for this record.
Contact Information
Point of Contact
Desmond Maynard
Des.Maynard@noaa.gov
360-871-8313
Metadata Contact
Metadata Contact
nmfs.nwfsc.metadata@noaa.gov
(206) 860-3433
Extents
-118.0829° W,
-118.0829° E,
45.3157° N,
45.3157° S
Eastern Oregon University, La Grande, OR: Eastern Oregon University lab, La Grande, OR
2014-01-01 - Present
Item Identification
| Title: | Oregon ESA 2010 BKD vertical transmission - Test of analyses for bacterial kidney disease as predictors of vertical transmission |
|---|---|
| Short Name: | Oregon ESA 2010 BKD vertical transmission (Test of analyses for bacterial kidney disease as predictors of vertical transmission) |
| Status: | In Work |
| Publication Date: | 2013-05-31 |
| Abstract: |
Although the pathogen causing bacterial kidney disease is known to be transmitted from broodstock female to offspring, there is large uncertainty around the likelihood of vertical transmission. Identifying predictors of transmission by analyzing broodstock tissues for pathogen presence would provide an important management tool for hatcheries and captive broodstock programs. This project assesses a suite of analytical methods for predictive utility by evaluating broodstock and following the infection fate of their offspring. In addition to measuring fork length (mm) & weight (g) of individual offspring, kidney tissue is analyzed for Renibacterium salmoninarum by enzyme-linked immunoassay (ELISA), fluorescent antibody microscopy, and duplex quantitative real-time polymerase chain reaction (qPCR). Individual fish data are recorded by spreadsheet. This project is conducted by Oregon Department of Fish & Wildlife in collaboration with NOAA personnel. This is a self-contained project. BKD vertical transmission lab analyses results. |
| Purpose: |
Laboratory data |
| Notes: |
Loaded by batch 4462, 02-26-2013 13:23 |
| Supplemental Information: |
These data are available to the public Report: Test of analyses for bacterial kidney disease as predictors of vertical transmission (agency report of study) Peer Reviewed Publication: Risk assessment of vertical transmission of Renibacterium salmoninarum (publication describing results) |
Keywords
Theme Keywords
| Thesaurus | Keyword |
|---|---|
| UNCONTROLLED | |
| PARR Exclusion | Non-NOAA Funded |
| None | artificial propagation |
| None | Biological |
| None | chinook salmon |
| None | pathogen |
Spatial Keywords
| Thesaurus | Keyword |
|---|---|
| UNCONTROLLED | |
| None | Eastern Oregon University, La Grande, OR |
Physical Location
| Organization: | Northwest Fisheries Science Center |
|---|---|
| City: | Seattle |
| State/Province: | WA |
| Country: | USA |
Data Set Information
| Data Set Scope Code: | Data Set |
|---|---|
| Data Presentation Form: | Table (digital) |
Support Roles
Data Steward
| Date Effective From: | 2015-10-01 |
|---|---|
| Date Effective To: | |
| Contact (Person): | Rhodes, Linda D |
| Address: |
2725 Montlake Blvd East Seattle, WA 98112 |
| Email Address: | Linda.Rhodes@noaa.gov |
| Phone: | 206-860-3279 |
| Fax: | 206-860-3467 |
Distributor
| Date Effective From: | 2015-10-01 |
|---|---|
| Date Effective To: | |
| Contact (Organization): | Northwest Fisheries Science Center (NWFSC) |
| Address: |
2725 Montlake Boulevard East Seattle, WA 98112 USA |
| Email Address: | nmfs.nwfsc.metadata@noaa.gov |
| Phone: | 206-860-3200 |
| URL: | NWFSC Home |
Metadata Contact
| Date Effective From: | 2015-10-01 |
|---|---|
| Date Effective To: | |
| Contact (Person): | Contact, Metadata |
| Address: |
2725 Montlake Boulevard East Seattle, WA 98112 USA |
| Email Address: | nmfs.nwfsc.metadata@noaa.gov |
| Phone: | (206) 860-3433 |
Originator
| Date Effective From: | 2015-10-01 |
|---|---|
| Date Effective To: | |
| Contact (Person): | Rhodes, Linda D |
| Address: |
2725 Montlake Blvd East Seattle, WA 98112 |
| Email Address: | Linda.Rhodes@noaa.gov |
| Phone: | 206-860-3279 |
| Fax: | 206-860-3467 |
Point of Contact
| Date Effective From: | 2015-10-01 |
|---|---|
| Date Effective To: | |
| Contact (Person): | Maynard, Desmond |
| Address: |
7305 East Beach Drive Manchester, WA 98366 |
| Email Address: | Des.Maynard@noaa.gov |
| Phone: | 360-871-8313 |
Extents
Extent Group 1
Extent Group 1 / Geographic Area 1
| W° Bound: | -118.0829 | |
|---|---|---|
| E° Bound: | -118.0829 | |
| N° Bound: | 45.3157 | |
| S° Bound: | 45.3157 | |
| Description |
Eastern Oregon University, La Grande, OR: Eastern Oregon University lab, La Grande, OR |
|
Extent Group 1 / Time Frame 1
| Time Frame Type: | Continuing |
|---|---|
| Start: | 2014-01-01 |
Access Information
| Security Class: | Unclassified |
|---|---|
| Data Access Procedure: |
Request submission by email or telephone |
| Data Access Constraints: |
NA |
Distribution Information
Distribution 1
| Download URL: | http://www.ncei.noaa.gov |
|---|---|
| Distributor: | |
| Description: |
http://www.ncei.noaa.gov |
Technical Environment
| Description: |
Spreadsheet |
|---|
Data Quality
| Accuracy: |
Medium |
|---|---|
| Quality Control Procedures Employed: |
Positive & negative controls, no template controls, comparison with previous curves |
Data Management
| Have Resources for Management of these Data Been Identified?: | No |
|---|---|
| Approximate Percentage of Budget for these Data Devoted to Data Management: | 5% |
| Do these Data Comply with the Data Access Directive?: | Yes |
| Is Access to the Data Limited Based on an Approved Waiver?: | No |
| If Distributor (Data Hosting Service) is Needed, Please Indicate: | No |
| Approximate Delay Between Data Collection and Dissemination: | 90 days |
| If Delay is Longer than Latency of Automated Processing, Indicate Under What Authority Data Access is Delayed: |
No Delay |
| Actual or Planned Long-Term Data Archive Location: | No Archiving Intended |
| If To Be Determined, Unable to Archive, or No Archiving Intended, Explain: |
Data submitted to Oregon Department of Fish & Wildlife |
| Approximate Delay Between Data Collection and Archiving: | 365 days |
| How Will the Data Be Protected from Accidental or Malicious Modification or Deletion Prior to Receipt by the Archive?: |
The Northwest Fisheries Science Center facilitates backup and recovery of all data and IT components which are managed by IT Operations through the capture of static (point-in-time) backup data to physical media. Once data is captured to physical media (every 1-3 days), a duplicate is made and routinely (weekly) transported to an offsite archive facility where it is maintained throughout the data's applicable life-cycle. |
Lineage
| Lineage Statement: |
Standard curve used to determine copy number |
|---|
Sources
NWFSC Annual Project Planning System
| Citation URL: | http://www.webapps.nwfsc.noaa.gov/5703 |
|---|
Catalog Details
| Catalog Item ID: | 18568 |
|---|---|
| GUID: | gov.noaa.nmfs.inport:18568 |
| Metadata Record Created By: | SysAdmin InPortAdmin |
| Metadata Record Created: | 2013-02-26 13:23+0000 |
| Metadata Record Last Modified By: | SysAdmin InPortAdmin |
| Metadata Record Last Modified: | 2022-08-09 17:11+0000 |
| Metadata Record Published: | 2016-02-29 |
| Owner Org: | NWFSC |
| Metadata Publication Status: | Published Externally |
| Do Not Publish?: | N |
| Metadata Last Review Date: | 2016-02-29 |
| Metadata Review Frequency: | 1 Year |
| Metadata Next Review Date: | 2017-02-28 |