Online cetacean habitat modeling system for the US east coast and Gulf of Mexico
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Summary
DOI: 10.3354/esr00430
DescriptionWe describe the development of a comprehensive set of marine mammal habitat models for the US east coast and Gulf of Mexico and their delivery through an online mapping portal. Drawing from datasets in the online OBIS-SEAMAP geo-database, we integrated surveys conducted by ship (n = 36) and aircraft (n = 16), weighting a generalized additive model (GAM) by minutes surveyed within space-time grid cells to harmonize effort between the 2 survey platforms. For each of 16 cetacean species guilds, we predicted the probability of occurrence from static environmental variables (water depth, distance to shore, distance to continental shelf break) and time-varying conditions (monthly sea surface temperature). To generate maps of presence versus absence, receiver operator characteristic (ROC) curves were used to define the optimal
threshold that minimizes false positive and false negative error rates. We integrated model outputs, including tables (species in guilds, input surveys) and plots (fit of environmental variables, ROC curve), into an online spatial decision support system (SDSS), allowing for easy navigation of models by taxon, region, season, and data provider. Users can define regions of interest and extract statistical summaries of the model for that region. The SDSS also displays density models from other providers and regions (e.g. Pacific Ocean). This versatile, easy-to-use online system enables the application of these habitat models to real-world conservation and management issues. Finally, we discuss the ecological relevance of these model outputs and identify key data gaps across species, regions, and seasons.
Document Information
Document Type
Journal article
Document Format
Acrobat Portable Document Format
Publication Date
2012-07-20
Contact Information
No contact information is available for this record.
Please contact the owner organization (SEFSC) for inquiries on this record.
Item Identification
Title: | Online cetacean habitat modeling system for the US east coast and Gulf of Mexico |
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Publication Date: | 2012-07-20 |
Abstract: |
We describe the development of a comprehensive set of marine mammal habitat models for the US east coast and Gulf of Mexico and their delivery through an online mapping portal. Drawing from datasets in the online OBIS-SEAMAP geo-database, we integrated surveys conducted by ship (n = 36) and aircraft (n = 16), weighting a generalized additive model (GAM) by minutes surveyed within space-time grid cells to harmonize effort between the 2 survey platforms. For each of 16 cetacean species guilds, we predicted the probability of occurrence from static environmental variables (water depth, distance to shore, distance to continental shelf break) and time-varying conditions (monthly sea surface temperature). To generate maps of presence versus absence, receiver operator characteristic (ROC) curves were used to define the optimal threshold that minimizes false positive and false negative error rates. We integrated model outputs, including tables (species in guilds, input surveys) and plots (fit of environmental variables, ROC curve), into an online spatial decision support system (SDSS), allowing for easy navigation of models by taxon, region, season, and data provider. Users can define regions of interest and extract statistical summaries of the model for that region. The SDSS also displays density models from other providers and regions (e.g. Pacific Ocean). This versatile, easy-to-use online system enables the application of these habitat models to real-world conservation and management issues. Finally, we discuss the ecological relevance of these model outputs and identify key data gaps across species, regions, and seasons. |
Other Citation Details: |
doi: 10.3354/esr00430 Best, B.D., Halpin, P.N., Read, A.J., Fujioka, E., Good, C.P., LaBrecque, E.A., Schick, R.S., Roberts, J.J., Hazen, L.J., Quian, S.S., Palka, D.L., Garrison, L.P. 2012. Online cetacean habitat modeling system for the United States East Coast and Gulf of Mexico. Endangered Species Research 18:1-15. |
DOI (Digital Object Identifier): | 10.3354/esr00430 |
Keywords
Theme Keywords
Thesaurus | Keyword |
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UNCONTROLLED | |
None | Habitat |
None | Cetacea |
None | Generalized additive model |
None | Spatial decision support system |
None | Species distribution model |
Spatial Keywords
Thesaurus | Keyword |
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UNCONTROLLED | |
None | Atlantic Ocean |
None | Gulf of Mexico |
Document Information
Document Type: | Journal article |
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Format: | Acrobat Portable Document Format |
Status Code: | Published |
Support Roles
Author
Date Effective From: | 2012 |
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Date Effective To: | |
Contact (Person): | Garrison, Lance |
Address: |
75 Virginia Beach Dr Miami, FL 33149 |
Email Address: | Lance.Garrison@noaa.gov |
Phone: | 305-361-4488 |
Fax: | 305-361-4478 |
Business Hours: | 8:00 AM - 4:30 PM EST/EDT |
URLs
URL 1
URL: | http://www.int-res.com/articles/esr_oa/n018p001.pdf |
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URL Type: |
Online Resource
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Description: |
url of article |
Catalog Details
Catalog Item ID: | 26136 |
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GUID: | gov.noaa.nmfs.inport:26136 |
Metadata Record Created By: | Lee M Weinberger |
Metadata Record Created: | 2015-07-28 10:13+0000 |
Metadata Record Last Modified By: | SysAdmin InPortAdmin |
Metadata Record Last Modified: | 2022-08-09 17:11+0000 |
Metadata Record Published: | 2021-04-29 |
Owner Org: | SEFSC |
Metadata Publication Status: | Published Externally |
Do Not Publish?: | N |
Metadata Last Review Date: | 2021-04-29 |
Metadata Review Frequency: | 1 Year |
Metadata Next Review Date: | 2022-04-29 |