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Short Citation:
Alaska Fisheries Science Center, 2024: Data from "Crossing to safety: Dispersal, colonization and mate choice in evolutionarily distinct populations of Steller sea lions, Eumetopias jubatus.", https://www.fisheries.noaa.gov/inport/item/29818.

Item Identification

Title: Data from "Crossing to safety: Dispersal, colonization and mate choice in evolutionarily distinct populations of Steller sea lions, Eumetopias jubatus."
Short Name: AFSC/NMML: Steller sea lion genetic data
Status: Completed
Publication Date: 2014-10-03
Abstract:

Data sets used to support analysis published by O'Corry-Crowe et al (2014) Crossing to safety: Dispersal, colonization and mate choice in evolutionarily distinct populations of Steller sea lions, Eumetopias jubatus. Molecular Ecology 23(22): 5415-5434. Data include Steller sea lion genetic data obtained from samples collected from pups on natal rookeries. The genetic data are genotypes at 16 microsatellite loci and haplotypes at mtDNA, spatial data, and allelic and haplotypic frequencies.

Purpose:

These data were collected to investigate Steller sea lion population structure and dispersion.

Other Citation Details:

When using these data, cite the original publication: O’Corry-Crowe G, Gelatt T, Rea L, Bonin C, Rehberg M (2014) Crossing to safety: Dispersal, colonization and mate choice in evolutionarily distinct populations of Steller sea lions, Eumetopias jubatus. Molecular Ecology 23(22): 5415-5434. http://dx.doi.org/10.1111/mec.12944.

Also cite the Dryad data package: O’Corry-Crowe G, Gelatt T, Rea L, Bonin C, Rehberg M (2014) Data from: Crossing to safety: Dispersal, colonization and mate choice in evolutionarily distinct populations of Steller sea lions, Eumetopias jubatus. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.g6h52

Keywords

Theme Keywords

Thesaurus Keyword
UNCONTROLLED
None colonization
None density dependence
None Eumetopias jubatus
None microsatellites
None mixed-stock
None Steller sea lion

Spatial Keywords

Thesaurus Keyword
UNCONTROLLED
None Alaska
None Aleutian Islands
None Bering Sea
None Gulf of Alaska
None Southeast Alaska

Physical Location

Organization: Alaska Fisheries Science Center
City: Seattle
State/Province: WA
Country: USA

Data Set Information

Data Set Scope Code: Data Set
Data Set Type: Files (Word, Excel, PDF, etc.)
Maintenance Frequency: None Planned
Data Presentation Form: Table (digital)
Entity Attribute Overview:

Data deposited at Dryad include MS Excel spreadsheets of genetic data for Steller sea lions; genotypes at 16 microsatellite loci and haplotypes at mtDNA, spatial data, and allelic and haplotypic frequencies. Data archived at GenBank are text files that provide text sequences in FASTA format of all 130 unique Steller sea lion mtDNA haplotypes and lists their GenBank accession numbers.

Entity Attribute Detail URL: http://datadryad.org/handle/10255/dryad.71270
Distribution Liability:

Applications or inferences derived from the data should be carefully considered for accuracy. While every effort has been made to ensure that these data are accurate and reliable within the limits of the current state of the art, NOAA cannot assume liability for any damages caused by any errors or omissions in the data, nor as a result of the failure of the data to function on a particular system. NOAA makes no warranty, expressed or implied, nor does the fact of distribution constitute such a warranty.

Data Set Credit: When using these data, cite the original publication: O’Corry-Crowe G, Gelatt T, Rea L, Bonin C, Rehberg M (2014) Crossing to safety: Dispersal, colonization and mate choice in evolutionarily distinct populations of Steller sea lions, Eumetopias jubatus. Molecular Ecology 23(22): 5415-5434. http://dx.doi.org/10.1111/mec.12944. Also cite the Dryad data package: O’Corry-Crowe G, Gelatt T, Rea L, Bonin C, Rehberg M (2014) Data from: Crossing to safety: Dispersal, colonization and mate choice in evolutionarily distinct populations of Steller sea lions, Eumetopias jubatus. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.g6h52

Support Roles

Data Steward

CC ID: 264939
Date Effective From: 2015
Date Effective To:
Contact (Person): Gelatt, Tom
Email Address: tom.gelatt@noaa.gov

Distributor

CC ID: 264451
Date Effective From: 2014-10-03
Date Effective To:
Contact (Organization): Alaska Fisheries Science Center (AFSC)
Address: 7600 Sand Point Way N.E., Building 4
Seattle, WA 98115
USA
Email Address: afsc.webmaster@noaa.gov
Phone: (206) 526-4000
Fax: (206) 526-4004
URL: https://www.fisheries.noaa.gov/about/alaska-fisheries-science-center
Business Hours: 0700-1700 Pacific Time
Contact Instructions:

Data are available at Dryad and GenBank. See Download section for instructions on how to obtain the data.

Metadata Contact

CC ID: 264452
Date Effective From: 2015-12-15
Date Effective To:
Contact (Person): Fadely, Brian
Address: SEATTLE, WA
USA
Email Address: brian.fadely@noaa.gov
Phone: 206-526-6173
Fax: 206-526-6615

Point of Contact

CC ID: 264457
Date Effective From: 2015-12-15
Date Effective To:
Contact (Person): Gelatt, Tom
Email Address: tom.gelatt@noaa.gov

Extents

Currentness Reference: Publication Date

Extent Group 1

Extent Group 1 / Geographic Area 1

CC ID: 264475
W° Bound: 173.355
E° Bound: -133.527
N° Bound: 60.163
S° Bound: 51.48

Extent Group 1 / Time Frame 1

CC ID: 264940
Time Frame Type: Discrete
Start: 2014-10-03
Description:

Data sets publication date.

Access Information

Security Class: Unclassified
Security Classification System:

None

Security Handling Description:

None

Data Access Policy:

Communication and collaboration with data set authors is strongly encouraged prior to use.

Data Access Procedure:

All 130 unique Steller sea lion mtDNA haplotype sequences have been archived on GenBank with accession numbers KM463123–KM463252. These sequences as well as all microsatellite genotype and mtDNA haplotype frequency data have been archived on the Dryad Digital Repository as data package 10.5061/dryad.g6 h52.

Data Access Constraints:

User must read and fully comprehend the metadata prior to use. Applications or inferences derived from the data should be carefully considered for accuracy.

Data Use Constraints:

User must read and fully comprehend the metadata prior to use. Applications or inferences derived from the data should be carefully considered for accuracy. While every effort has been made to ensure that these data are accurate and reliable within the limits of the current state of the art, NOAA cannot assume liability for any damages caused by any errors or omissions in the data, nor as a result of the failure of the data to function on a particular system. NOAA makes no warranty, expressed or implied, nor does the fact of distribution constitute such a warranty. Communication and collaboration with data set authors is strongly encouraged.

When using this data, please cite the original publication:

O’Corry-Crowe G, Gelatt T, Rea L, Bonin C, Rehberg M (2014) Crossing to safety: Dispersal, colonization and mate choice in evolutionarily distinct populations of Steller sea lions, Eumetopias jubatus. Molecular Ecology 23(22): 5415-5434. http://dx.doi.org/10.1111/mec.12944

Additionally, please cite the Dryad data package:

O’Corry-Crowe G, Gelatt T, Rea L, Bonin C, Rehberg M (2014) Data from: Crossing to safety: Dispersal, colonization and mate choice in evolutionarily distinct populations of Steller sea lions, Eumetopias jubatus. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.g6h52

Metadata Access Constraints:

None.

Metadata Use Constraints:

Metadata are subject to revision at any time and information within the metadata record should not be cited without author consent. While every effort has been made to ensure that these data are accurate and reliable within the limits of the current state of the art, NOAA cannot assume liability for any damages caused by any errors or omissions in the data, nor as a result of the failure of the data to function on a particular system. NOAA makes no warranty, expressed or implied, nor does the fact of distribution constitute such a warranty.

Distribution Information

Distribution 1

CC ID: 264880
Download URL: http://datadryad.org/bitstream/handle/10255/dryad.71271/GOCC%20-%20Steller%20sea%20lion%20data.xlsx?sequence=1
Distributor:
File Name: GOCC - Steller sea lion data.xlsx
Description:

Genetic data for Steller sea lions; genotypes at 16 microsatellite loci and haplotypes at mtDNA, spatial data, and allelic and haplotypic frequencies.

File Date/Time: 2014-10-03 00:00:00
File Type (Deprecated): MS Excel Spreadsheet
Distribution Format: XLS - Microsoft Excel
File Size: 130.1 Kb

Distribution 2

CC ID: 264881
Download URL: http://datadryad.org/bitstream/handle/10255/dryad.71870/GOCC%20-%20stellers%20130%20uni%20haps%20-%20FASTA.txt?sequence=1
Distributor:
File Name: GOCC - stellers 130 uni haps - FASTA.txt
Description:

Provides text sequences in FASTA format of all 130 unique Steller sea lion mtDNA haplotypes and lists their GenBank accession numbers.

File Date/Time: 2014-10-03 00:00:00
File Size: 80.62 Kb

URLs

URL 1

CC ID: 264876
URL: http://onlinelibrary.wiley.com/doi/10.1111/mec.12944/full
URL Type:
Online Resource
File Resource Format: HTML
Description:

Online edition of: O’Corry-Crowe G, Gelatt T, Rea L, Bonin C, Rehberg M (2014) Crossing to safety: Dispersal, colonization and mate choice in evolutionarily distinct populations of Steller sea lions, Eumetopias jubatus. Molecular Ecology 23(22): 5415-5434. http://dx.doi.org/10.1111/mec.12944

URL 2

CC ID: 264878
URL: http://datadryad.org/handle/10255/dryad.71270
URL Type:
Online Resource
File Resource Format: HTML
Description:

Data files location on Dryad. Data can be downloaded from links on this site.

URL 3

CC ID: 837862
URL: https://noaa-fisheries-afsc.data.socrata.com/dataset/Alaska-Steller-sea-lion-genetic-data-of-pups-on-na/x7cd-6ax5
Name: Alaska Steller sea lion genetic data of pups on natal rookeries
URL Type:
Online Resource
Description:

NOAA Fisheries Open Data Portal record.

Technical Environment

Description:

Data are stored in MS Excel spreadsheets and text formats.

Data Quality

Representativeness:

See O'Corry-Crowe et al. 2014.

Accuracy:

See O'Corry-Crowe et al. 2014.

Analytical Accuracy:

See O'Corry-Crowe et al. 2014.

Quantitation Limits:

See O'Corry-Crowe et al. 2014.

Bias:

See O'Corry-Crowe et al. 2014.

Comparability:

See O'Corry-Crowe et al. 2014.

Completeness Measure:

See O'Corry-Crowe et al. 2014.

Precision:

See O'Corry-Crowe et al. 2014.

Analytical Precision:

See O'Corry-Crowe et al. 2014.

Field Precision:

See O'Corry-Crowe et al. 2014.

Sensitivity:

See O'Corry-Crowe et al. 2014.

Detection Limit:

See O'Corry-Crowe et al. 2014.

Completeness Report:

See O'Corry-Crowe et al. 2014.

Conceptual Consistency:

See O'Corry-Crowe et al. 2014.

Quality Control Procedures Employed:

See O'Corry-Crowe et al. 2014.

Data Management

Have Resources for Management of these Data Been Identified?: No
Approximate Percentage of Budget for these Data Devoted to Data Management: 0
Do these Data Comply with the Data Access Directive?: No
Is Access to the Data Limited Based on an Approved Waiver?: No
If Distributor (Data Hosting Service) is Needed, Please Indicate: Yes
Approximate Delay Between Data Collection and Dissemination: Unknown
If Delay is Longer than Latency of Automated Processing, Indicate Under What Authority Data Access is Delayed:

Data are not automatically processed.

Actual or Planned Long-Term Data Archive Location: Other
If World Data Center or Other, Specify: Dryad
Approximate Delay Between Data Collection and Archiving: Unknown
How Will the Data Be Protected from Accidental or Malicious Modification or Deletion Prior to Receipt by the Archive?:

IT Security and Contingency Plan for the system establishes procedures and applies to the functions, operations, and resources necessary to recover and restore data as hosted in the Western Regional Support Center in Seattle, Washington, following a disruption.

Lineage

Lineage Statement:

See information and lineage descriptions at:

O’Corry-Crowe G, Gelatt T, Rea L, Bonin C, Rehberg M (2014) Crossing to safety: Dispersal, colonization and mate choice in evolutionarily distinct populations of Steller sea lions, Eumetopias jubatus. Molecular Ecology 23(22): 5415-5434. http://dx.doi.org/10.1111/mec.12944

and at:

O’Corry-Crowe G, Gelatt T, Rea L, Bonin C, Rehberg M (2014) Data from: Crossing to safety: Dispersal, colonization and mate choice in evolutionarily distinct populations of Steller sea lions, Eumetopias jubatus. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.g6h52

Sources

O’Corry-Crowe G, Gelatt T, Rea L, Bonin C, Rehberg M (2014) Crossing to safety: Dispersal, colonization and mate choice in evolutionarily distinct populations of Steller sea lions, Eumetopias jubatus. Molecular Ecology 23(22): 5415-5434. http://dx.doi.org/10.1111/mec.12944

CC ID: 264941
Contact Name: Molecular Ecology
Publish Date: 2014-10-16
Citation URL: http://onlinelibrary.wiley.com/doi/10.1111/mec.12944/full

O’Corry-Crowe G, Gelatt T, Rea L, Bonin C, Rehberg M (2014) Data from: Crossing to safety: Dispersal, colonization and mate choice in evolutionarily distinct populations of Steller sea lions, Eumetopias jubatus. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.g6h52

CC ID: 264942
Contact Name: Dryad
Publish Date: 2014-10-03
Citation URL: http://datadryad.org/resource/doi:10.5061/dryad.g6h52/2

Catalog Details

Catalog Item ID: 29818
GUID: gov.noaa.nmfs.inport:29818
Metadata Record Created By: Brian Fadely
Metadata Record Created: 2015-12-15 18:08+0000
Metadata Record Last Modified By: SysAdmin InPortAdmin
Metadata Record Last Modified: 2024-01-15 12:08+0000
Metadata Record Published: 2018-11-27
Owner Org: AFSC
Metadata Publication Status: Published Externally
Do Not Publish?: N
Metadata Last Review Date: 2018-11-27
Metadata Review Frequency: 1 Year
Metadata Next Review Date: 2019-11-27