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NEFSC Metadata Library > Ecosystems & Aquaculture Division (EAD) > Fisheries Ecology Branch (FEB) > Experimental tests of the effects of OA on earl... >

SumFL Larval size_DATA

Entity (ENT)  |  Northeast Fisheries Science Center (NEFSC)
GUID: gov.noaa.nmfs.inport:47399  |  Updated: August 9, 2022  |  Published / External 

Item Identification

Title: SumFL Larval size_DATA
Short Name: SumFL Larval size_DATA
Status: Completed
Abstract:

Summer flounder larval size and shape

Entity Information

Entity Type: Spreadsheet
Active Version?: Yes
Description:

Summer flounder larval size and shape

Data Attributes

Attribute Summary

Rubric Score Primary Key? Name Type Description
100
 Primary Key Data row NUMBER integer count of data rows
100
 Spec CHARACTER species (summer flounder, SF)
100
 Age NUMBER age at sample, days post-hatch
100
 pH NUMBER H+ ion concentration (-log10)
100
 pCO2 NUMBER partial pressure of carbon dioxide
100
 Rep NUMBER replicate number of experimental treatment
100
 Fish num NUMBER fish number within treatment x replicate x age for photographs
100
 BL NUMBER body length, mm (see Chambers et al. 2014. Biogeoscience 11 1613-1626, Figure 1)
100
 FL NUMBER flexion length, mm, applies only to advanced larvae (see Chambers et al. 2014, Figure 1)
100
 SNL NUMBER standard or notocord length, mm (see Chambers et al. 2014, Figure 1)
100
 TL NUMBER total length, mm (see Chambers et al. 2014, Figure 1)
100
 SNL_run NUMBER standard or notocord length based on sum of line segments for larvae that are curled, mm
100
 TL_run NUMBER total length based on sum of line segments for larvae that are curled, mm
100
 SNL_ seg NUMBER number of line segments summed for SNL_run
100
 TL_ seg NUMBER number of line segments summed for TL_run
100
 JL NUMBER jaw length, mm, applies only to advanced larvae (see Chambers et al. 2014, Figure 1)
100
 FDV NUMBER body depth at vent including finfold, mm (see Chambers et al. 2014, Figure 1)
100
 MDV NUMBER body depth at vent, musculature (excluding finfold) mm (see Chambers et al. 2014, Figure 1)
100
 FA_deg NUMBER flexion angle based on deviation from midline, deg, applies only to advanced larvae (see Chambers et al. 2014, Figure 1)
100
 YL NUMBER yolk length, mm, applies only to Day 0 larvae (see Chambers et al. 2014, Figure 1)
100
 YD NUMBER yolk depth, mm, applies only to Day 0 larvae (see Chambers et al. 2014, Figure 1)
100
 OG1 NUMBER oil globule diameter, mm, applies only to Day 0 larvae (see Chambers et al. 2014, Figure 1)
100
 OG2 NUMBER oil globule diameter perpendicular to OG1, mm, applies only to Day 0 larvae (see Chambers et al. 2014, Figure 1)
100
 OGD NUMBER oil globule diameter derived from average of OG1, OG2 assuming spheriocity, mm, applies only to Day 0 larvae
100
 BL_code NUMBER quality code of image for this metric (1=no issues, 2=blurring/other sources of variance, 3=poor
100
 FL_code NUMBER quality code of image for this metric (1=no issues, 2=blurring/other sources of variance, 3=poor
100
 SNL_code NUMBER quality code of image for this metric (1=no issues, 2=blurring/other sources of variance, 3=poor
100
 TL_code NUMBER quality code of image for this metric (1=no issues, 2=blurring/other sources of variance, 3=poor
100
 SNL-run_code NUMBER quality code of image for this metric (1=no issues, 2=blurring/other sources of variance, 3=poor
100
 TL-run_code NUMBER quality code of image for this metric (1=no issues, 2=blurring/other sources of variance, 3=poor
100
 JL_code NUMBER quality code of image for this metric (1=no issues, 2=blurring/other sources of variance, 3=poor
100
 FDV_code NUMBER quality code of image for this metric (1=no issues, 2=blurring/other sources of variance, 3=poor
100
 MDV_code NUMBER quality code of image for this metric (1=no issues, 2=blurring/other sources of variance, 3=poor
100
 FA_code NUMBER quality code of image for this metric (1=no issues, 2=blurring/other sources of variance, 3=poor
100
 YL_code NUMBER quality code of image for this metric (1=no issues, 2=blurring/other sources of variance, 3=poor
100
 YD_code NUMBER quality code of image for this metric (1=no issues, 2=blurring/other sources of variance, 3=poor
100
 OG 1 _code NUMBER quality code of image for this metric (1=no issues, 2=blurring/other sources of variance, 3=poor
100
 OG 2 _code NUMBER quality code of image for this metric (1=no issues, 2=blurring/other sources of variance, 3=poor
100
 OGD_code NUMBER quality code of image for this metric (1=no issues, 2=blurring/other sources of variance, 3=poor
100
 Impair NUMBER larva was impaired, curled, etc., making use problematic
100
 Imp_Dam NUMBER larva appeard to be impaired due to handling damage

Attribute Details

Data row

CC ID: 590275
Seq. Order: 1
Data Storage Type: NUMBER
Max Length: 3
Required: Yes
Primary Key: Yes
Precision: 3
Scale: 0
Status: Active
Description:

integer count of data rows
General Data Type: NUMBER

Spec

CC ID: 590276
Seq. Order: 2
Data Storage Type: CHARACTER
Max Length: 2
Required: Yes
Primary Key: No
Status: Active
Description:

species (summer flounder, SF)
General Data Type: CHARACTER

Age

CC ID: 590277
Seq. Order: 3
Data Storage Type: NUMBER
Max Length: 2
Required: Yes
Primary Key: No
Precision: 2
Scale: 0
Status: Active
Description:

age at sample, days post-hatch
General Data Type: NUMBER

pH

CC ID: 590278
Seq. Order: 4
Data Storage Type: NUMBER
Max Length: 4
Required: Yes
Primary Key: No
Precision: 3
Scale: 2
Status: Active
Description:

H+ ion concentration (-log10)
General Data Type: NUMBER

pCO2

CC ID: 590279
Seq. Order: 5
Data Storage Type: NUMBER
Max Length: 4
Required: Yes
Primary Key: No
Precision: 4
Scale: 0
Status: Active
Description:

partial pressure of carbon dioxide
General Data Type: NUMBER

Rep

CC ID: 590280
Seq. Order: 6
Data Storage Type: NUMBER
Max Length: 1
Required: Yes
Primary Key: No
Precision: 1
Scale: 0
Status: Active
Description:

replicate number of experimental treatment
General Data Type: NUMBER

Fish num

CC ID: 590281
Seq. Order: 7
Data Storage Type: NUMBER
Max Length: 1
Required: No
Primary Key: No
Precision: 1
Scale: 0
Status: Active
Description:

fish number within treatment x replicate x age for photographs
General Data Type: NUMBER

BL

CC ID: 590282
Seq. Order: 8
Data Storage Type: NUMBER
Max Length: 5
Required: No
Primary Key: No
Precision: 4
Scale: 3
Status: Active
Description:

body length, mm (see Chambers et al. 2014. Biogeoscience 11 1613-1626, Figure 1)
General Data Type: NUMBER

FL

CC ID: 590283
Seq. Order: 9
Data Storage Type: NUMBER
Max Length: 5
Required: No
Primary Key: No
Precision: 4
Scale: 3
Status: Active
Description:

flexion length, mm, applies only to advanced larvae (see Chambers et al. 2014, Figure 1)
General Data Type: NUMBER

SNL

CC ID: 590284
Seq. Order: 10
Data Storage Type: NUMBER
Max Length: 5
Required: No
Primary Key: No
Precision: 4
Scale: 3
Status: Active
Description:

standard or notocord length, mm (see Chambers et al. 2014, Figure 1)
General Data Type: NUMBER

TL

CC ID: 590285
Seq. Order: 11
Data Storage Type: NUMBER
Max Length: 5
Required: No
Primary Key: No
Precision: 4
Scale: 3
Status: Active
Description:

total length, mm (see Chambers et al. 2014, Figure 1)
General Data Type: NUMBER

SNL_run

CC ID: 590286
Seq. Order: 12
Data Storage Type: NUMBER
Max Length: 4
Required: No
Primary Key: No
Precision: 3
Scale: 2
Status: Active
Description:

standard or notocord length based on sum of line segments for larvae that are curled, mm
General Data Type: NUMBER

TL_run

CC ID: 590287
Seq. Order: 13
Data Storage Type: NUMBER
Max Length: 4
Required: No
Primary Key: No
Precision: 3
Scale: 2
Status: Active
Description:

total length based on sum of line segments for larvae that are curled, mm
General Data Type: NUMBER

SNL_ seg

CC ID: 590288
Seq. Order: 14
Data Storage Type: NUMBER
Max Length: 1
Required: No
Primary Key: No
Precision: 1
Scale: 0
Status: Active
Description:

number of line segments summed for SNL_run
General Data Type: NUMBER

TL_ seg

CC ID: 590289
Seq. Order: 15
Data Storage Type: NUMBER
Max Length: 1
Required: No
Primary Key: No
Precision: 1
Scale: 0
Status: Active
Description:

number of line segments summed for TL_run
General Data Type: NUMBER

JL

CC ID: 590290
Seq. Order: 16
Data Storage Type: NUMBER
Max Length: 5
Required: No
Primary Key: No
Precision: 4
Scale: 3
Status: Active
Description:

jaw length, mm, applies only to advanced larvae (see Chambers et al. 2014, Figure 1)
General Data Type: NUMBER

FDV

CC ID: 590291
Seq. Order: 17
Data Storage Type: NUMBER
Max Length: 5
Required: No
Primary Key: No
Precision: 4
Scale: 3
Status: Active
Description:

body depth at vent including finfold, mm (see Chambers et al. 2014, Figure 1)
General Data Type: NUMBER

MDV

CC ID: 590292
Seq. Order: 18
Data Storage Type: NUMBER
Max Length: 5
Required: No
Primary Key: No
Precision: 4
Scale: 3
Status: Active
Description:

body depth at vent, musculature (excluding finfold) mm (see Chambers et al. 2014, Figure 1)
General Data Type: NUMBER

FA_deg

CC ID: 590293
Seq. Order: 19
Data Storage Type: NUMBER
Max Length: 6
Required: No
Primary Key: No
Precision: 5
Scale: 2
Status: Active
Description:

flexion angle based on deviation from midline, deg, applies only to advanced larvae (see Chambers et al. 2014, Figure 1)
General Data Type: NUMBER

YL

CC ID: 590294
Seq. Order: 20
Data Storage Type: NUMBER
Max Length: 5
Required: No
Primary Key: No
Precision: 4
Scale: 3
Status: Active
Description:

yolk length, mm, applies only to Day 0 larvae (see Chambers et al. 2014, Figure 1)
General Data Type: NUMBER

YD

CC ID: 590295
Seq. Order: 21
Data Storage Type: NUMBER
Max Length: 5
Required: No
Primary Key: No
Precision: 4
Scale: 3
Status: Active
Description:

yolk depth, mm, applies only to Day 0 larvae (see Chambers et al. 2014, Figure 1)
General Data Type: NUMBER

OG1

CC ID: 590296
Seq. Order: 22
Data Storage Type: NUMBER
Max Length: 5
Required: No
Primary Key: No
Precision: 4
Scale: 3
Status: Active
Description:

oil globule diameter, mm, applies only to Day 0 larvae (see Chambers et al. 2014, Figure 1)
General Data Type: NUMBER

OG2

CC ID: 590297
Seq. Order: 23
Data Storage Type: NUMBER
Max Length: 5
Required: No
Primary Key: No
Precision: 4
Scale: 3
Status: Active
Description:

oil globule diameter perpendicular to OG1, mm, applies only to Day 0 larvae (see Chambers et al. 2014, Figure 1)
General Data Type: NUMBER

OGD

CC ID: 590298
Seq. Order: 24
Data Storage Type: NUMBER
Max Length: 6
Required: No
Primary Key: No
Precision: 5
Scale: 4
Status: Active
Description:

oil globule diameter derived from average of OG1, OG2 assuming spheriocity, mm, applies only to Day 0 larvae
General Data Type: NUMBER

BL_code

CC ID: 590299
Seq. Order: 25
Data Storage Type: NUMBER
Max Length: 1
Required: No
Primary Key: No
Precision: 1
Scale: 0
Status: Active
Description:

quality code of image for this metric (1=no issues, 2=blurring/other sources of variance, 3=poor
General Data Type: NUMBER

FL_code

CC ID: 590300
Seq. Order: 26
Data Storage Type: NUMBER
Max Length: 1
Required: No
Primary Key: No
Precision: 1
Scale: 0
Status: Active
Description:

quality code of image for this metric (1=no issues, 2=blurring/other sources of variance, 3=poor
General Data Type: NUMBER

SNL_code

CC ID: 590301
Seq. Order: 27
Data Storage Type: NUMBER
Max Length: 1
Required: No
Primary Key: No
Precision: 1
Scale: 0
Status: Active
Description:

quality code of image for this metric (1=no issues, 2=blurring/other sources of variance, 3=poor
General Data Type: NUMBER

TL_code

CC ID: 590302
Seq. Order: 28
Data Storage Type: NUMBER
Max Length: 1
Required: No
Primary Key: No
Precision: 1
Scale: 0
Status: Active
Description:

quality code of image for this metric (1=no issues, 2=blurring/other sources of variance, 3=poor
General Data Type: NUMBER

SNL-run_code

CC ID: 590303
Seq. Order: 29
Data Storage Type: NUMBER
Max Length: 1
Required: No
Primary Key: No
Precision: 1
Scale: 0
Status: Active
Description:

quality code of image for this metric (1=no issues, 2=blurring/other sources of variance, 3=poor
General Data Type: NUMBER

TL-run_code

CC ID: 590304
Seq. Order: 30
Data Storage Type: NUMBER
Max Length: 1
Required: No
Primary Key: No
Precision: 1
Scale: 0
Status: Active
Description:

quality code of image for this metric (1=no issues, 2=blurring/other sources of variance, 3=poor
General Data Type: NUMBER

JL_code

CC ID: 590305
Seq. Order: 31
Data Storage Type: NUMBER
Max Length: 1
Required: No
Primary Key: No
Precision: 1
Scale: 0
Status: Active
Description:

quality code of image for this metric (1=no issues, 2=blurring/other sources of variance, 3=poor
General Data Type: NUMBER

FDV_code

CC ID: 590306
Seq. Order: 32
Data Storage Type: NUMBER
Max Length: 1
Required: No
Primary Key: No
Precision: 1
Scale: 0
Status: Active
Description:

quality code of image for this metric (1=no issues, 2=blurring/other sources of variance, 3=poor
General Data Type: NUMBER

MDV_code

CC ID: 590307
Seq. Order: 33
Data Storage Type: NUMBER
Max Length: 1
Required: No
Primary Key: No
Precision: 1
Scale: 0
Status: Active
Description:

quality code of image for this metric (1=no issues, 2=blurring/other sources of variance, 3=poor
General Data Type: NUMBER

FA_code

CC ID: 590308
Seq. Order: 34
Data Storage Type: NUMBER
Max Length: 1
Required: No
Primary Key: No
Precision: 1
Scale: 0
Status: Active
Description:

quality code of image for this metric (1=no issues, 2=blurring/other sources of variance, 3=poor
General Data Type: NUMBER

YL_code

CC ID: 590309
Seq. Order: 35
Data Storage Type: NUMBER
Max Length: 1
Required: No
Primary Key: No
Precision: 1
Scale: 0
Status: Active
Description:

quality code of image for this metric (1=no issues, 2=blurring/other sources of variance, 3=poor
General Data Type: NUMBER

YD_code

CC ID: 590310
Seq. Order: 36
Data Storage Type: NUMBER
Max Length: 1
Required: No
Primary Key: No
Precision: 1
Scale: 0
Status: Active
Description:

quality code of image for this metric (1=no issues, 2=blurring/other sources of variance, 3=poor
General Data Type: NUMBER

OG 1 _code

CC ID: 590311
Seq. Order: 37
Data Storage Type: NUMBER
Max Length: 1
Required: No
Primary Key: No
Precision: 1
Scale: 0
Status: Active
Description:

quality code of image for this metric (1=no issues, 2=blurring/other sources of variance, 3=poor
General Data Type: NUMBER

OG 2 _code

CC ID: 590312
Seq. Order: 38
Data Storage Type: NUMBER
Max Length: 1
Required: No
Primary Key: No
Precision: 1
Scale: 0
Status: Active
Description:

quality code of image for this metric (1=no issues, 2=blurring/other sources of variance, 3=poor
General Data Type: NUMBER

OGD_code

CC ID: 590313
Seq. Order: 39
Data Storage Type: NUMBER
Max Length: 1
Required: No
Primary Key: No
Precision: 1
Scale: 0
Status: Active
Description:

quality code of image for this metric (1=no issues, 2=blurring/other sources of variance, 3=poor
General Data Type: NUMBER

Impair

CC ID: 590314
Seq. Order: 40
Data Storage Type: NUMBER
Max Length: 1
Required: No
Primary Key: No
Precision: 1
Scale: 0
Status: Active
Description:

larva was impaired, curled, etc., making use problematic
General Data Type: NUMBER

Imp_Dam

CC ID: 590315
Seq. Order: 41
Data Storage Type: NUMBER
Max Length: 1
Required: No
Primary Key: No
Precision: 1
Scale: 0
Status: Active
Description:

larva appeard to be impaired due to handling damage
General Data Type: NUMBER

Catalog Details

Catalog Item ID: 47399
GUID: gov.noaa.nmfs.inport:47399
Metadata Record Created By: Patricia L Jones
Metadata Record Created: 2017-09-19 16:14+0000
Metadata Record Last Modified By: SysAdmin InPortAdmin
Metadata Record Last Modified: 2022-08-09 17:11+0000
Metadata Record Published: 2017-09-19
Owner Org: NEFSC
Metadata Publication Status: Published Externally
Do Not Publish?: N
Metadata Last Review Date: 2017-09-19
Metadata Review Frequency: 1 Year
Metadata Next Review Date: 2018-09-19