Deep Sea Corals PARR 02.21.18
Entity (ENT) | Northwest Fisheries Science Center (NWFSC)GUID: gov.noaa.nmfs.inport:51593 | Updated: August 9, 2022 | Published / External
Item Identification
| Title: | Deep Sea Corals PARR 02.21.18 |
|---|---|
| Short Name: | Deep Sea Corals PARR 02.21.18 |
| Status: | Planned |
| Abstract: |
This is a table referencing DNA sequences generated from deep sea corals collected by a number of agencies. All sequences are published in one of two databases, and those accession numbers are included here. The Genbank Database can be accessed here: https://www.ncbi.nlm.nih.gov/genbank/. The National Coral Database can be accessed here: https://deepseacoraldata.noaa.gov/. |
Entity Information
| Entity Type: | Spreadsheet |
|---|---|
| Active Version?: | Yes |
| Schema Name: | PARR |
| Description: |
This is a table referencing DNA sequences generated from deep sea corals collected by a number of agencies. All sequences are published in one of two databases, and those accession numbers are included here. The Genbank Database can be accessed here: https://www.ncbi.nlm.nih.gov/genbank/. The National Coral Database can be accessed here: https://deepseacoraldata.noaa.gov/. |
Data Attributes
Attribute Summary
|
|
Name | Type | Description |
|---|---|---|---|---|
|
100
|
Barcode or Agency ID | text | Barcode or other identifier given to the specimen from the original agency doing the collection. Units for values are N/A. | |
|
100
|
Agency of Specimen Origin | text | Agency responsible for the original specimen collection. Units for values are N/A. | |
|
100
|
Verified Species ID by Morphology | text | Species identification determined by a taxonomic expert, based on morphology of the specimen. Units for values are N/A. | |
|
100
|
Morphologist of ID Designation | text | Taxonomic expert responsible for the morphological identification. Units for values are N/A. | |
|
100
|
Genetic Species ID by DNA Sequence | text | Species identification based on DNA sequence information. Units for values are N/A. | |
|
100
|
Database for Sequences | text | Database(s) containing DNA sequence information from these specimens. Units for values are N/A. | |
|
100
|
Genbank Accession Number | text | Accession number(s) for DNA sequences published in Genbank. Units for values are N/A. | |
|
100
|
National Coral Database Accession Number | text | Accession number for DNA sequences included in the National Coral Database. Units for values are N/A. |
Attribute Details
Barcode or Agency ID
| Seq. Order: | 1 |
|---|---|
| Data Storage Type: | text |
| Required: | No |
| Primary Key: | No |
| Status: | Active |
| Description: |
Barcode or other identifier given to the specimen from the original agency doing the collection. Units for values are N/A. |
| General Data Type: | text |
| Unit of Measure: | N/A |
| Allowed Values: | N/A |
Agency of Specimen Origin
| Seq. Order: | 2 |
|---|---|
| Data Storage Type: | text |
| Required: | No |
| Primary Key: | No |
| Status: | Active |
| Description: |
Agency responsible for the original specimen collection. Units for values are N/A. |
| General Data Type: | text |
| Unit of Measure: | N/A |
| Allowed Values: | N/A |
Verified Species ID by Morphology
| Seq. Order: | 3 |
|---|---|
| Data Storage Type: | text |
| Required: | No |
| Primary Key: | No |
| Status: | Active |
| Description: |
Species identification determined by a taxonomic expert, based on morphology of the specimen. Units for values are N/A. |
| General Data Type: | text |
| Unit of Measure: | N/A |
| Allowed Values: | N/A |
Morphologist of ID Designation
| Seq. Order: | 4 |
|---|---|
| Data Storage Type: | text |
| Required: | No |
| Primary Key: | No |
| Status: | Active |
| Description: |
Taxonomic expert responsible for the morphological identification. Units for values are N/A. |
| General Data Type: | text |
| Unit of Measure: | N/A |
| Allowed Values: | N/A |
Genetic Species ID by DNA Sequence
| Seq. Order: | 5 |
|---|---|
| Data Storage Type: | text |
| Required: | No |
| Primary Key: | No |
| Status: | Active |
| Description: |
Species identification based on DNA sequence information. Units for values are N/A. |
| General Data Type: | text |
| Unit of Measure: | N/A |
| Allowed Values: | N/A |
Database for Sequences
| Seq. Order: | 6 |
|---|---|
| Data Storage Type: | text |
| Required: | No |
| Primary Key: | No |
| Status: | Active |
| Description: |
Database(s) containing DNA sequence information from these specimens. Units for values are N/A. |
| General Data Type: | text |
| Unit of Measure: | N/A |
| Allowed Values: | N/A |
Genbank Accession Number
| Seq. Order: | 7 |
|---|---|
| Data Storage Type: | text |
| Required: | No |
| Primary Key: | No |
| Status: | Active |
| Description: |
Accession number(s) for DNA sequences published in Genbank. Units for values are N/A. |
| General Data Type: | text |
| Unit of Measure: | N/A |
| Allowed Values: | N/A |
National Coral Database Accession Number
| Seq. Order: | 8 |
|---|---|
| Data Storage Type: | text |
| Required: | No |
| Primary Key: | No |
| Status: | Active |
| Description: |
Accession number for DNA sequences included in the National Coral Database. Units for values are N/A. |
| General Data Type: | text |
| Unit of Measure: | N/A |
| Allowed Values: | N/A |
Catalog Details
| Catalog Item ID: | 51593 |
|---|---|
| GUID: | gov.noaa.nmfs.inport:51593 |
| Metadata Record Created By: | Jeffrey W Cowen |
| Metadata Record Created: | 2018-02-22 19:00+0000 |
| Metadata Record Last Modified By: | SysAdmin InPortAdmin |
| Metadata Record Last Modified: | 2022-08-09 17:11+0000 |
| Metadata Record Published: | 2018-02-27 |
| Owner Org: | NWFSC |
| Metadata Publication Status: | Published Externally |
| Do Not Publish?: | N |
| Metadata Last Review Date: | 2018-02-27 |
| Metadata Review Frequency: | 1 Year |
| Metadata Next Review Date: | 2019-02-27 |