Short Citation
National Centers for Coastal Ocean Science, 2024: RESTORE Sponsored Research Project: Population Connectivity of Deepwater Corals in the Northern Gulf of Mexico, https://www.fisheries.noaa.gov/inport/item/65516.
Full Citation Examples

Abstract

This project will determine where the corals in different mesophotic (50-150 m) and deepwater (150-2400 m) populations in the Gulf of Mexico originated from, which is critical information for conserving and restoring these important habitats that were damaged by the Deepwater Horizon (DWH) Oil Spill.

NCEI Accession 0243646

Herrera, S. 2021. NOAA RESTORE Science Program: population connectivity of deepwater corals in the Northern Gulf of Mexico: conductivity-temperature-depth (CTD) cast data from 2017-07-20 to 2018-09-22 (NCEI Accession 0243646). NOAA National Centers for Environmental Information. Dataset. https://doi.org/10.25921/t7n4-tt77
Model Data on Dropbox

Bracco, A. 2021. Coral Paper. Georgia Institute of Technology Dropbox. https://www.dropbox.com/sh/1qrtj8qq9r68ixy/AACacahcanK7mwTX1rTT4laka?dl=0
Genetic Data

Herrera, S. 2021. Swiftia exserta isolate OP_17_95 mismatch repair protein (MutS) gene, partial cds; mitochondrial. National Center for Biotechnology Information, Accession: MW357889. https://www.ncbi.nlm.nih.gov/nuccore/MW357889

Date: 09-28-2021

Herrera, S. 2021. Swiftia exserta isolate OP_17_096 mismatch repair protein (MutS) gene, partial cds; mitochondrial. National Center for Biotechnology Information, Accession: MW357890. https://www.ncbi.nlm.nih.gov/nuccore/MW357890

Date: 09-28-2021

Herrera, S. 2021. Swiftia exserta isolate OP_17_322 mismatch repair protein (MutS) gene, partial cds; mitochondrial. National Center for Biotechnology Information, Accession: MW357887. https://www.ncbi.nlm.nih.gov/nuccore/MW357887

Date: 09-28-2021

Herrera, S. 2021. Swiftia exserta isolate OP_17_324 mismatch repair protein (MutS) gene, partial cds; mitochondrial. National Center for Biotechnology Information, Accession: MW357888. https://www.ncbi.nlm.nih.gov/nuccore/MW357888

Date: 09-28-2021

Herrera, S. 2021. Swiftia exserta isolate OP_17_351 mismatch repair protein (MutS) gene, partial cds; mitochondrial. National Center for Biotechnology Information, Accession: MW357891. https://www.ncbi.nlm.nih.gov/nuccore/MW357891

Date: 09-28-2021

Herrera, S. 2021. mismatch repair protein, partial (mitochondrion) [Swiftia exserta]. National Center for Biotechnology Information, Accession: UBI51323. https://www.ncbi.nlm.nih.gov/protein/UBI51323

Date: 09-28-2021

Herrera, S. 2021. mismatch repair protein, partial (mitochondrion) [Swiftia exserta]. National Center for Biotechnology Information, Accession: UBI51324. https://www.ncbi.nlm.nih.gov/protein/UBI51324

Date: 09-28-2021

Herrera, S. 2021. mismatch repair protein, partial (mitochondrion) [Swiftia exserta]. National Center for Biotechnology Information, Accession: UBI51321. https://www.ncbi.nlm.nih.gov/protein/UBI51321

Date: 09-28-2021

Herrera, S. 2021. mismatch repair protein, partial (mitochondrion) [Swiftia exserta]. National Center for Biotechnology Information, Accession: UBI51322. https://www.ncbi.nlm.nih.gov/protein/UBI51322

Date: 09-28-2021

Herrera, S. 2021. mismatch repair protein, partial (mitochondrion) [Swiftia exserta]. National Center for Biotechnology Information, Accession: UBI51325. https://www.ncbi.nlm.nih.gov/protein/UBI51325

Date: 09-28-2021
RESTORE Deepwater Corals Videos

Herrera, S. 2021. RESTORE Deepwater Corals. YouTube. https://www.youtube.com/channel/UC-lb30l-7e5QWcFbxVClE4Q/videos
Model Data on figshare

Herrera, S. 2021. Datasets of "Population connectivity and seascape genomics of Paramuricea biscaya in the northern Gulf of Mexico". figshare. https://doi.org/10.6084/m9.figshare.16692229.v4
Genetic Data

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Genetic Data

Herrera, S. 2020. Muricea pendula isolate OP17-300 cytochrome oxidase subunit 1 (COI) gene, partial cds; mitochondrial. National Center for Biotechnology Information, Accession: MN862696. https://www.ncbi.nlm.nih.gov/nuccore/MN862696

Herrera, S. 2020. cytochrome oxidase subunit 1, partial (mitochondrion) [Muricea pendula]. National Center for Biotechnology Information, Accession: QNC69440. https://www.ncbi.nlm.nih.gov/protein/QNC69440

Herrera, S. 2020. Swiftia exserta isolate OP17-343 cytochrome oxidase subunit 1 (COI) gene, partial cds; mitochondrial. National Center for Biotechnology Information, Accession: MN862697. https://www.ncbi.nlm.nih.gov/nuccore/MN862697

Herrera, S. 2020. cytochrome oxidase subunit 1, partial (mitochondrion) [Swiftia exserta]. National Center for Biotechnology Information, Accession: QNC69441. https://www.ncbi.nlm.nih.gov/protein/QNC69441

Access Constraints:

None

Use Constraints:

None

DYNAMIC VEGETATION/ECOSYSTEM MODELS, EARTH SCIENCE, REEF

No Child Items for this record.

Point of Contact
NCCOS Scientific Data Coordinator
NCCOS.data@noaa.gov

Metadata Contact
NCCOS Scientific Data Coordinator
NCCOS.data@noaa.gov

Geographic Area 1

-98° W, -82° E, 31° N, 18° S

RESTORE Program

Time Frame 1
2017-06 - 2022-05

Project

Title:	RESTORE Sponsored Research Project: Population Connectivity of Deepwater Corals in the Northern Gulf of Mexico
Short Name:	Project: Herrera, Deepwater Corals
Status:	In Work
Creation Date:	2017
Publication Date:	2021
Abstract:	This project will determine where the corals in different mesophotic (50-150 m) and deepwater (150-2400 m) populations in the Gulf of Mexico originated from, which is critical information for conserving and restoring these important habitats that were damaged by the Deepwater Horizon (DWH) Oil Spill.
Purpose:	Deepwater corals provide habitat for diverse and abundant invertebrate and fish communities, including refuge and prey for commercially valuable fisheries. These extremely slow-growing communities are becoming increasingly vulnerable to anthropogenic threats from increased ocean temperatures, fishing activities, and oil and gas exploration. Understanding how deepwater corals are genetically connected is critical to their conservation and restoration. This collaborative effort will enhance the understanding of Gulf of Mexico coral ecosystems with concrete restoration and conservation initiatives to ensure recovery of degraded deepwater coral communities. The information gained from this project will aid in decision-making regarding establishment of Marine Protected Areas (MPAs) by the Gulf of Mexico Fishery Management Council. This project is led by the Lehigh University in partnership with Harvey Mudd College, the Georgia Institute of Technology, and NOAA. This project is funded by the NOAA RESTORE Science Program under award NA17NOS4510096 to Lehigh University.

Theme Keywords

Thesaurus

Keyword

Global Change Master Directory (GCMD) Science Keywords

EARTH SCIENCE

Global Change Master Directory (GCMD) Science Keywords

EARTH SCIENCE > BIOSPHERE > ECOSYSTEMS > MARINE ECOSYSTEMS > REEF

Global Change Master Directory (GCMD) Service Keywords

EARTH SCIENCE SERVICES > MODELS > DYNAMIC VEGETATION/ECOSYSTEM MODELS

UNCONTROLLED

NCCOS Keywords

NCCOS Research Data Type > Field Observation

NCCOS Keywords

NCCOS Research Data Type > Model

NCCOS Keywords

NCCOS Sponsored Research > RESTORE Science Program

Spatial Keywords

Thesaurus

Keyword

Global Change Master Directory (GCMD) Location Keywords

OCEAN > ATLANTIC OCEAN > NORTH ATLANTIC OCEAN > GULF OF MEXICO

UNCONTROLLED

NCCOS Keywords

NCCOS Research Location > Region > Gulf of Mexico

Organization:	National Centers for Coastal Ocean Science
City:	Silver Spring
State/Province:	MD

Data Set Scope Code:	Data Set
Data Presentation Form:	Table (digital)

Data Steward

CC ID: 1086616

Date Effective From:	2021
Date Effective To:
Contact (Position):	NCCOS Scientific Data Coordinator
Email Address:	NCCOS.data@noaa.gov

Distributor

CC ID: 1086620

Date Effective From:	2021
Date Effective To:
Contact (Organization):	National Centers for Environmental Information - Silver Spring, Maryland (NCEI-MD)
Address:	NOAA/NESDIS E/OC SSMC3, 4th Floor, 1351 East-West Highway Silver Spring, MD 20910-3282
Phone:	(301) 713-3277

Distributor

CC ID: 1086634

Date Effective From:	2020
Date Effective To:
Contact (Organization):	National Institutes of Health, National Center for Biotechnology Information, Gene Expression Omnibus (NIH NCBI GEO)
Email Address:	geo@ncbi.nlm.nih.gov
URL:	Website Home Page

Metadata Contact

CC ID: 1086617

Date Effective From:	2021
Date Effective To:
Contact (Position):	NCCOS Scientific Data Coordinator
Email Address:	NCCOS.data@noaa.gov

Point of Contact

CC ID: 1086618

Date Effective From:	2017
Date Effective To:
Contact (Position):	NCCOS Scientific Data Coordinator
Email Address:	NCCOS.data@noaa.gov
Contact Instructions:	Frank Parker, NOAA RESTORE Science Program, frank.parker@noaa.gov

View Historical Support Roles

Extent Group 1

Extent Group 1 / Geographic Area 1

CC ID: 1086628

W° Bound:	-98
E° Bound:	-82
N° Bound:	31
S° Bound:	18
Description	RESTORE Program

Extent Group 1 / Time Frame 1

CC ID: 1086627

Time Frame Type:	Range
Start:	2017-06
End:	2022-05
Description:	Project

Security Class:	Unclassified
Data Access Procedure:	Download from website
Data Access Constraints:	None
Data Use Constraints:	None

Distribution 1

CC ID: 1183078

Start Date:	2021-12-14
End Date:	Present
Download URL:	https://doi.org/10.25921/t7n4-tt77
Distributor:	National Centers for Environmental Information - Silver Spring, Maryland (NCEI-MD) (2021 - Present)
File Name:	NCEI Accession 0243646
Description:	Herrera, S. 2021. NOAA RESTORE Science Program: population connectivity of deepwater corals in the Northern Gulf of Mexico: conductivity-temperature-depth (CTD) cast data from 2017-07-20 to 2018-09-22 (NCEI Accession 0243646). NOAA National Centers for Environmental Information. Dataset. https://doi.org/10.25921/t7n4-tt77
File Type (Deprecated):	NCEI Archived Data Accession

Distribution 2

CC ID: 1183075

Start Date:	2021-11-05
End Date:	Present
Download URL:	https://www.dropbox.com/sh/1qrtj8qq9r68ixy/AACacahcanK7mwTX1rTT4laka?dl=0
Distributor:
File Name:	Model Data on Dropbox
Description:	Bracco, A. 2021. Coral Paper. Georgia Institute of Technology Dropbox. https://www.dropbox.com/sh/1qrtj8qq9r68ixy/AACacahcanK7mwTX1rTT4laka?dl=0

Distribution 3

CC ID: 1089020

Start Date:	2021-09-28
End Date:	Present
Download URL:	https://www.ncbi.nlm.nih.gov/
Distributor:	National Institutes of Health, National Center for Biotechnology Information, Gene Expression Omnibus (NIH NCBI GEO) (2020 - Present)
File Name:	Genetic Data
Description:	Herrera, S. 2021. Swiftia exserta isolate OP_17_95 mismatch repair protein (MutS) gene, partial cds; mitochondrial. National Center for Biotechnology Information, Accession: MW357889. https://www.ncbi.nlm.nih.gov/nuccore/MW357889 Date: 09-28-2021 Herrera, S. 2021. Swiftia exserta isolate OP_17_096 mismatch repair protein (MutS) gene, partial cds; mitochondrial. National Center for Biotechnology Information, Accession: MW357890. https://www.ncbi.nlm.nih.gov/nuccore/MW357890 Date: 09-28-2021 Herrera, S. 2021. Swiftia exserta isolate OP_17_322 mismatch repair protein (MutS) gene, partial cds; mitochondrial. National Center for Biotechnology Information, Accession: MW357887. https://www.ncbi.nlm.nih.gov/nuccore/MW357887 Date: 09-28-2021 Herrera, S. 2021. Swiftia exserta isolate OP_17_324 mismatch repair protein (MutS) gene, partial cds; mitochondrial. National Center for Biotechnology Information, Accession: MW357888. https://www.ncbi.nlm.nih.gov/nuccore/MW357888 Date: 09-28-2021 Herrera, S. 2021. Swiftia exserta isolate OP_17_351 mismatch repair protein (MutS) gene, partial cds; mitochondrial. National Center for Biotechnology Information, Accession: MW357891. https://www.ncbi.nlm.nih.gov/nuccore/MW357891 Date: 09-28-2021 Herrera, S. 2021. mismatch repair protein, partial (mitochondrion) [Swiftia exserta]. National Center for Biotechnology Information, Accession: UBI51323. https://www.ncbi.nlm.nih.gov/protein/UBI51323 Date: 09-28-2021 Herrera, S. 2021. mismatch repair protein, partial (mitochondrion) [Swiftia exserta]. National Center for Biotechnology Information, Accession: UBI51324. https://www.ncbi.nlm.nih.gov/protein/UBI51324 Date: 09-28-2021 Herrera, S. 2021. mismatch repair protein, partial (mitochondrion) [Swiftia exserta]. National Center for Biotechnology Information, Accession: UBI51321. https://www.ncbi.nlm.nih.gov/protein/UBI51321 Date: 09-28-2021 Herrera, S. 2021. mismatch repair protein, partial (mitochondrion) [Swiftia exserta]. National Center for Biotechnology Information, Accession: UBI51322. https://www.ncbi.nlm.nih.gov/protein/UBI51322 Date: 09-28-2021 Herrera, S. 2021. mismatch repair protein, partial (mitochondrion) [Swiftia exserta]. National Center for Biotechnology Information, Accession: UBI51325. https://www.ncbi.nlm.nih.gov/protein/UBI51325 Date: 09-28-2021

Distribution 4

CC ID: 1183077

Start Date:	2021-07-01
End Date:	Present
Download URL:	https://www.youtube.com/channel/UC-lb30l-7e5QWcFbxVClE4Q/videos
Distributor:
File Name:	RESTORE Deepwater Corals Videos
Description:	Herrera, S. 2021. RESTORE Deepwater Corals. YouTube. https://www.youtube.com/channel/UC-lb30l-7e5QWcFbxVClE4Q/videos

Distribution 5

CC ID: 1183076

Start Date:	2021-06-11
End Date:	Present
Download URL:	https://doi.org/10.6084/m9.figshare.16692229.v4
Distributor:
File Name:	Model Data on figshare
Description:	Herrera, S. 2021. Datasets of "Population connectivity and seascape genomics of Paramuricea biscaya in the northern Gulf of Mexico". figshare. https://doi.org/10.6084/m9.figshare.16692229.v4

Distribution 6

CC ID: 1086636

Start Date:	2021-05-09
End Date:	Present
Download URL:	https://www.ncbi.nlm.nih.gov/
Distributor:	National Institutes of Health, National Center for Biotechnology Information, Gene Expression Omnibus (NIH NCBI GEO) (2020 - Present)
File Name:	Genetic Data
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Distribution 7

CC ID: 1086635

Start Date:	2020-08-11
End Date:	Present
Download URL:	https://www.ncbi.nlm.nih.gov/
Distributor:	National Institutes of Health, National Center for Biotechnology Information, Gene Expression Omnibus (NIH NCBI GEO) (2020 - Present)
File Name:	Genetic Data
Description:	Herrera, S. 2020. Muricea pendula isolate OP17-300 cytochrome oxidase subunit 1 (COI) gene, partial cds; mitochondrial. National Center for Biotechnology Information, Accession: MN862696. https://www.ncbi.nlm.nih.gov/nuccore/MN862696 Herrera, S. 2020. cytochrome oxidase subunit 1, partial (mitochondrion) [Muricea pendula]. National Center for Biotechnology Information, Accession: QNC69440. https://www.ncbi.nlm.nih.gov/protein/QNC69440 Herrera, S. 2020. Swiftia exserta isolate OP17-343 cytochrome oxidase subunit 1 (COI) gene, partial cds; mitochondrial. National Center for Biotechnology Information, Accession: MN862697. https://www.ncbi.nlm.nih.gov/nuccore/MN862697 Herrera, S. 2020. cytochrome oxidase subunit 1, partial (mitochondrion) [Swiftia exserta]. National Center for Biotechnology Information, Accession: QNC69441. https://www.ncbi.nlm.nih.gov/protein/QNC69441

URL 1

CC ID: 1086621

URL:	https://cdn.coastalscience.noaa.gov/restore/restore_tagbottom.png
Name:	RESTORE Science Program
URL Type:	Browse Graphic
Description:	RESTORE Science Program Logo

URL 2

CC ID: 1086622

URL:	https://restoreactscienceprogram.noaa.gov/projects/deepwater-corals
Name:	Deepwater Corals
URL Type:	Online Resource
Description:	RESTORE Research Project Webpage: Population Connectivity of Deepwater Corals in the Northern Gulf of Mexico

Activity Log 1

CC ID: 1089021

Activity Date/Time:	2021-09-30
Activity Type:	Distribution update
Responsible Party:	Jessica Morgan
Description:	Added 10 NCBI accessions

Completeness Report:	For details, see Distribution Information.
Quality Control Procedures Employed:	For details of data quality control methods, see Lineage Sources. All users should independently analyze the datasets according to their own needs and standards to determine data usability.

Have Resources for Management of these Data Been Identified?:	No
Approximate Percentage of Budget for these Data Devoted to Data Management:	Unknown
Do these Data Comply with the Data Access Directive?:	Yes
Is Access to the Data Limited Based on an Approved Waiver?:	No
Approximate Delay Between Data Collection and Dissemination:	2 years
Actual or Planned Long-Term Data Archive Location:	Other
Approximate Delay Between Data Collection and Archiving:	2 years
How Will the Data Be Protected from Accidental or Malicious Modification or Deletion Prior to Receipt by the Archive?:	NCCOS IT Policy

Lineage Statement:

This project will focus on four species of mesophotic and deepwater corals that were directly impacted by the DWH Oil Spill. The project aims to help guide management decisions by addressing crucial gaps in the understanding of the processes that influence population connectivity patterns of habitat-forming deepwater and mesophotic corals. The team will achieve this by combining field sampling, population genomic analyses, and physical oceanographic modeling to 1) define spatial scales of coral populations, 2) infer directionality and relative rate of genetic exchange among the coral populations, and 3) integrate predictive models of larval dispersal with genetic data to estimate dispersal distances and connectivity patterns.

Instruments

Instrument Unavailable Reason:	Not Applicable

Platforms

Platform Unavailable Reason:	Not Applicable

Catalog Item ID:	65516
GUID:	gov.noaa.nmfs.inport:65516
Metadata Record Created By:	Jessica Morgan
Metadata Record Created:	2021-09-20 14:05+0000
Metadata Record Last Modified By:	Jessica Morgan
Metadata Record Last Modified:	2022-09-01 14:36+0000
Metadata Record Published:	2021-09-20
Owner Org:	NCCOS
Metadata Publication Status:	Published Externally
Do Not Publish?:	N
Metadata Last Review Date:	2021-09-20
Metadata Review Frequency:	1 Year
Metadata Next Review Date:	2022-09-20

Summary

Distribution Information

Controlled Theme Keywords

Child Items

Contact Information

Extents

Item Identification

Keywords

Theme Keywords

Spatial Keywords

Physical Location

Data Set Information

Support Roles

Data Steward

Distributor

Distributor

Metadata Contact

Point of Contact

Extents

Extent Group 1

Extent Group 1 / Geographic Area 1

Extent Group 1 / Time Frame 1

Access Information

Distribution Information

Distribution 1

Distribution 2

Distribution 3

Distribution 4

Distribution 5

Distribution 6

Distribution 7

URLs

URL 1

URL 2

Activity Log

Activity Log 1

Data Quality

Data Management

Lineage

Acquisition Information

Instruments

Platforms

Catalog Details