2019-2021 MHI SfM Coral Observations: Data Dictionary
Entity (ENT) | Pacific Islands Fisheries Science Center (PIFSC)GUID: gov.noaa.nmfs.inport:65773 | Updated: October 4, 2023 | Published / External
Item Identification
Title: | 2019-2021 MHI SfM Coral Observations: Data Dictionary |
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Short Name: | Data Dictionary |
Entity Information
Entity Type: | Spreadsheet |
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Active Version?: | Yes |
Description: |
Observation data entities compiled for 2023 SfM colony level annotations conducted by NOAA Ecosystem Sciences Division. |
Change Summary: |
This data dictionary was updated to include new columns in the 2023 generated dataset for 2019 - 2021 SfM bleaching fixed site annotations ; originally it held metrics that were collected during the initial phase of data collection for only the 2019 SfM models. |
Data Attributes
Attribute Summary
Name | Type | Description | ||
---|---|---|---|---|
100
|
PatchID | NUMBER | Unique ID number per site for coral patch outlined | |
100
|
Site | TEXT | Fixed site at which SfM imagery was collected | |
100
|
Quadrat | NUMBER | ID number of randomly placed 0.7 x 0.7m quadrat. Blank values values signify a colony was opportunistically surveyed outside of a quadrat. Quadrat 0 implies that the observations were conducted irregardless of quadrats (described further in Notes) | |
100
|
Date | DATE | Date of SfM survey in MM/DD/YYYY format. | |
100
|
Spec_Code | TEXT | 4-letter code assigned to adult coral species identified in annotations, defined in list of coral species codes provided | |
100
|
Morph_Code | TEXT | 2-letter code for coral morphology type ('BR' = branching, 'EM' = encrusting (mounding), 'MD' = mounding, 'KN' = knobby, 'PL' = plating) | |
100
|
BLE_EXT | NUMBER | Extent of bleaching as expressed by percent of patch exhibiting paling from 0-100%. Blank values denote no bleaching observations were conducted (survey years 2020 and 2021). | |
100
|
BLE_SEV | NUMBER | The severity of bleaching from 1 (being slightly pale) to 3 (stark white). Blank values signify no bleaching observations were conducted (survey years 2020 and 2021). Values of 0 mean that the bleaching extent was 0%. | |
100
|
LinkTP_Back | VARCHAR2 | List of unique Patch IDs that this patch transitioned from in previous timepoint. Blank values mean that no prior timepoint of data exists for this patch. | |
100
|
LinkTP_For | VARCHAR2 | List of unique Patch IDs that this patch transitioned to in the next available timepoint. -99.2 and -99.3 mean that the patch underwent mortality in the subsequent timepoint. Blank values mean that no future timepoint of data exists for this patch. | |
100
|
TimePt | NUMBER | Timepoint ID for this survey year | |
100
|
Perimeter_m | NUMBER | The perimeter (meters) of the patch. | |
100
|
PlanarArea_m_sq | NUMBER | The planar area (squared meters) of the patch. | |
100
|
Year | DATE | The year this survey was conducted | |
100
|
Max_Diameter_m | NUMBER | The maximum diameter (meters) of the patch. | |
100
|
Genet_ID | NUMBER | The unique identification number of the overall 'genet' that this coral patch is a part of. See Lineage Statement for definition and more information regarding 'genet'. | |
100
|
Notes | TEXT | Any notes from annotations; explains blank values for specific columns. Blanks indicate no notes were recorded. |
Attribute Details
PatchID
Seq. Order: | 1 |
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Data Storage Type: | NUMBER |
Required: | No |
Primary Key: | No |
Status: | Active |
Description: |
Unique ID number per site for coral patch outlined |
Site
Seq. Order: | 2 |
---|---|
Data Storage Type: | TEXT |
Required: | No |
Primary Key: | No |
Status: | Active |
Description: |
Fixed site at which SfM imagery was collected |
Quadrat
Seq. Order: | 3 |
---|---|
Data Storage Type: | NUMBER |
Required: | No |
Primary Key: | No |
Status: | Active |
Description: |
ID number of randomly placed 0.7 x 0.7m quadrat. Blank values values signify a colony was opportunistically surveyed outside of a quadrat. Quadrat 0 implies that the observations were conducted irregardless of quadrats (described further in Notes) |
Date
Seq. Order: | 4 |
---|---|
Data Storage Type: | DATE |
Required: | No |
Primary Key: | No |
Status: | Active |
Description: |
Date of SfM survey in MM/DD/YYYY format. |
Spec_Code
Seq. Order: | 5 |
---|---|
Data Storage Type: | TEXT |
Required: | No |
Primary Key: | No |
Status: | Active |
Description: |
4-letter code assigned to adult coral species identified in annotations, defined in list of coral species codes provided |
Morph_Code
Seq. Order: | 6 |
---|---|
Data Storage Type: | TEXT |
Required: | No |
Primary Key: | No |
Status: | Active |
Description: |
2-letter code for coral morphology type ('BR' = branching, 'EM' = encrusting (mounding), 'MD' = mounding, 'KN' = knobby, 'PL' = plating) |
BLE_EXT
Seq. Order: | 7 |
---|---|
Data Storage Type: | NUMBER |
Required: | No |
Primary Key: | No |
Status: | Active |
Description: |
Extent of bleaching as expressed by percent of patch exhibiting paling from 0-100%. Blank values denote no bleaching observations were conducted (survey years 2020 and 2021). |
BLE_SEV
Seq. Order: | 8 |
---|---|
Data Storage Type: | NUMBER |
Required: | No |
Primary Key: | No |
Status: | Active |
Description: |
The severity of bleaching from 1 (being slightly pale) to 3 (stark white). Blank values signify no bleaching observations were conducted (survey years 2020 and 2021). Values of 0 mean that the bleaching extent was 0%. |
LinkTP_Back
Seq. Order: | 9 |
---|---|
Data Storage Type: | VARCHAR2 |
Required: | No |
Primary Key: | No |
Status: | Active |
Description: |
List of unique Patch IDs that this patch transitioned from in previous timepoint. Blank values mean that no prior timepoint of data exists for this patch. |
LinkTP_For
Seq. Order: | 10 |
---|---|
Data Storage Type: | VARCHAR2 |
Required: | No |
Primary Key: | No |
Status: | Active |
Description: |
List of unique Patch IDs that this patch transitioned to in the next available timepoint. -99.2 and -99.3 mean that the patch underwent mortality in the subsequent timepoint. Blank values mean that no future timepoint of data exists for this patch. |
TimePt
Seq. Order: | 11 |
---|---|
Data Storage Type: | NUMBER |
Required: | No |
Primary Key: | No |
Status: | Active |
Description: |
Timepoint ID for this survey year |
Perimeter_m
Seq. Order: | 12 |
---|---|
Data Storage Type: | NUMBER |
Required: | No |
Primary Key: | No |
Status: | Active |
Description: |
The perimeter (meters) of the patch. |
PlanarArea_m_sq
Seq. Order: | 13 |
---|---|
Data Storage Type: | NUMBER |
Required: | No |
Primary Key: | No |
Status: | Active |
Description: |
The planar area (squared meters) of the patch. |
Year
Seq. Order: | 14 |
---|---|
Data Storage Type: | DATE |
Required: | No |
Primary Key: | No |
Status: | Active |
Description: |
The year this survey was conducted |
Max_Diameter_m
Seq. Order: | 15 |
---|---|
Data Storage Type: | NUMBER |
Required: | No |
Primary Key: | No |
Status: | Active |
Description: |
The maximum diameter (meters) of the patch. |
Genet_ID
Seq. Order: | 16 |
---|---|
Data Storage Type: | NUMBER |
Required: | No |
Primary Key: | No |
Status: | Active |
Description: |
The unique identification number of the overall 'genet' that this coral patch is a part of. See Lineage Statement for definition and more information regarding 'genet'. |
Notes
Seq. Order: | 17 |
---|---|
Data Storage Type: | TEXT |
Required: | No |
Primary Key: | No |
Status: | Active |
Description: |
Any notes from annotations; explains blank values for specific columns. Blanks indicate no notes were recorded. |
Catalog Details
Catalog Item ID: | 65773 |
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GUID: | gov.noaa.nmfs.inport:65773 |
Metadata Record Created By: | Brooke Olenski |
Metadata Record Created: | 2021-11-06 00:43+0000 |
Metadata Record Last Modified By: | Lori H Luers |
Metadata Record Last Modified: | 2023-10-04 21:29+0000 |
Metadata Record Published: | 2023-10-04 |
Owner Org: | PIFSC |
Metadata Publication Status: | Published Externally |
Do Not Publish?: | N |
Metadata Last Review Date: | 2021-12-14 |
Metadata Review Frequency: | 1 Year |
Metadata Next Review Date: | 2022-12-14 |