Slide Menu
Search Help Show/Hide Menu
Short Citation:
Northwest Fisheries Science Center, 2022: In-stream PIT detection, estuary wetlands - Columbia River Estuary Tidal Habitats, https://www.fisheries.noaa.gov/inport/item/17979.

Item Identification

Title: In-stream PIT detection, estuary wetlands - Columbia River Estuary Tidal Habitats
Short Name: In-stream PIT detection, estuary wetlands (Columbia River Estuary Tidal Habitats)
Status: Completed
Creation Date: 2006-04-04
Publication Date: 2017-02-16
Abstract:

The goal of the tidal-fluvial estuary study is to determine the estuary's contribution to the spatial structure and life history diversity of Columbia River salmon stocks and the implications for estuary restoration. The study targets salmon use of tidal-fresh habitats in the estuary from Rkm 75 to Bonneville Dam, and addresses four primary objectives:

1. Characterize the temporal and spatial distribution of Chinook salmon genetic stock groups throughout the estuary (March 2010 - March 2012).

2. Determine stock-specific habitat use, life histories, and performance of juvenile salmon in key habitat complexes to fill data gaps in the tidal fluvial reaches of the estuary (2012-2016).

3. Monitor juvenile salmon life histories and their contributions to adult returns in selected estuary tributaries, including tributary examples where tidal habitats have been restored (2012-2018).

4. Evaluate estuary restoration needs for recovery of all salmon ESUs and account for projected effects of climate change through application of a salmon life-cycle model (2011-1015).

The study, funded by the U.S. Army Corps of Engineers, involves a large team of researchers organized by NOAA Fisheries, including researchers from the Oregon Health and Sciences University, University of Washington, and Washington Department of Fish and Wildlife. The study addresses critical uncertainties identified in the research, monitoring, and evaluation (RME) program for the Federal Columbia River Estuary Program (FCREP). The Estuary Program is intended to conserve and restore the estuary ecosystem to improve the performance of listed salmonid populations. Products from the tidal-fluvial study will include:

1. Descriptions of stock-specific temporal and spatial distributions of Chinook salmon throughout the estuary.

2. Estimates of variations in Chinook salmon stock composition and stock-specific growth, food habits, consumption rates, and bioenergetic efficiencies within selected tidal-fluvial habitats.

3. Estimated contributions of estuarine life histories among returning adult Chinook salmon from selected populations throughout the Columbia River Basin.

4. A hydrological model quantifying the dynamics of rearing habitat opportunities for juvenile salmon at estuary reach and habitat scales.

5. Improved life-cycle models to account for the estuarine life histories of juvenile salmon and estimating the potential effectiveness of estuary restoration actions on the recovery and viability of selected salmon stocks. These results will directly address information needs to support estuary actions specified in the Federal Columbia River Power System (FCRPS) Biological Opinion for the Columbia River. The tidal-fluvial estuary study is part of an ongoing estuary research program initiated in 2002. The current study expands upon earlier research conducted in the lower 100 km of the estuary from 2002 to 2008. Although all objectives will be addressed by 2018 to correspond with a review of progress implementing the FCRPS Biological Opinion, some sampling activities may extend beyond this date to allow brood-year reconstruction of estuary contributions to adult returns in selected streams (Objective 3).

PIT detection data (residence time, travel time) in estuary wetland channels from juvenile salmon tagged by this project and other projects.

Purpose:

Addresses Legal Mandate

Raw/field data, Monitoring or sensor data, Time series (of types 1-3)

Notes:

Loaded by batch 4266, 01-30-2013 18:25

Supplemental Information:

Subject to Public Access to Research Results (PARR): Yes

Database: Genetic stock distribution. Genetic stock group ID for juvenile Chinook Salmon collected from 3 habitats each from 6 tidal-fluvial estuary reaches

Journal Publication: Genetic Identification of Chinook Salmon in the Columbia River Estuary: Stock-specific Distributions of Juveniles in Shallow Tidal Freshwater Habitats. David J. Teel, Daniel L. Bottom, Susan A. Hinton, David R. Kuligowski,

George T. McCabe, Regan McNatt, G. Curtis Roegner, Lia A. Stamatiou & Charles A. Simenstad

(2014) Genetic Identification of Chinook Salmon in the Columbia River Estuary: Stock-Specific

Distributions of Juveniles in Shallow Tidal Freshwater Habitats, North American Journal of

Fisheries Management, 34:3, 621-641, DOI: 10.1080/02755947.2014.901258

Journal Publication: Residency and movement of juvenile Chinook salmon at multiple scales in a tidal marsh of the Columbia River Estuary. Regan A McNatt, Susan, A Hinton, Daniel L. Bottom

Keywords

Theme Keywords

Thesaurus Keyword
UNCONTROLLED
None Chinook salmon
None Columbia River
None habitat
None juvenile salmonid
None life history

Spatial Keywords

Thesaurus Keyword
UNCONTROLLED
None Point Adams Field Station

Instrument Keywords

Thesaurus Keyword
UNCONTROLLED
None Balance
None Depth-Temperature Sensor
None Instrument Not Applicable - Instrument Not Applicable
None Length Board

Platform Keywords

Thesaurus Keyword
UNCONTROLLED
None Animal and Plant Collection Device

Physical Location

Organization: Northwest Fisheries Science Center
City: Seattle
State/Province: WA
Country: USA

Data Set Information

Data Set Scope Code: Data Set
Data Set Type: Access Database
Data Presentation Form: Table (digital)

Support Roles

Data Steward

CC ID: 851674
Date Effective From: 2015-10-01
Date Effective To:
Contact (Person): McNatt, Regan A
Email Address: Regan.McNatt@noaa.gov
Phone: 503-861-1818 x25

Distributor

CC ID: 851675
Date Effective From: 2015-10-01
Date Effective To:
Contact (Organization): Northwest Fisheries Science Center (NWFSC)
Address: 2725 Montlake Boulevard East
Seattle, WA 98112
USA
Email Address: nmfs.nwfsc.metadata@noaa.gov
Phone: 206-860-3200
URL: NWFSC Home

Metadata Contact

CC ID: 851673
Date Effective From: 2015-10-01
Date Effective To:
Contact (Organization): Northwest Fisheries Science Center (NWFSC)
Address: 2725 Montlake Boulevard East
Seattle, WA 98112
USA
Email Address: nmfs.nwfsc.metadata@noaa.gov
Phone: 206-860-3200
URL: NWFSC Home

Originator

CC ID: 851677
Date Effective From: 2015-10-01
Date Effective To:
Contact (Person): McNatt, Regan A
Email Address: Regan.McNatt@noaa.gov
Phone: 503-861-1818 x25

Point of Contact

CC ID: 851676
Date Effective From: 2015-10-01
Date Effective To:
Contact (Person): McNatt, Regan A
Email Address: Regan.McNatt@noaa.gov
Phone: 503-861-1818 x25

Extents

Extent Group 1

Extent Group 1 / Geographic Area 1

CC ID: 851685
W° Bound: -123.9474
E° Bound: -123.9474
N° Bound: 46.1995
S° Bound: 46.1995
Description

Point Adams Field Station

Extent Group 1 / Time Frame 1

CC ID: 851684
Time Frame Type: Range
Start: 2010-03-31
End: 2018-09-30

Access Information

Security Class: Unclassified
Data Access Procedure:

Majority of these data are already available via the regional database, PTAGIS.org

Data Access Constraints:

N/A

Distribution Information

Distribution 1

CC ID: 851679
Start Date: 2017-02-16
End Date: Present
Download URL: https://www.webapps.nwfsc.noaa.gov/apex/parr/pit_tag_details/data/page/
Distributor: Northwest Fisheries Science Center (NWFSC) (2015-10-01 - Present)
File Name: PIT Tag Details (RESTful)
Description:

Tag details for PIT tagged fish detected in estuary wetland channels from juvenile salmon.

Distribution 2

CC ID: 851681
Start Date: 2017-02-16
End Date: Present
Download URL: https://www.webapps.nwfsc.noaa.gov/apex/parr/pit_tag_downloaded_data/data/page/
Distributor: Northwest Fisheries Science Center (NWFSC) (2015-10-01 - Present)
File Name: PIT Tag Downloaded Data (RESTful)
Description:

Downloaded data for PIT tagged fish detected in estuary wetland channels from juvenile salmon.

Distribution 3

CC ID: 851678
Start Date: 2017-02-16
End Date: Present
Download URL: https://www.webapps.nwfsc.noaa.gov/apex/parrdata/inventory/tables/table/pit_tag_details
Distributor: Northwest Fisheries Science Center (NWFSC) (2015-10-01 - Present)
File Name: PIT Tag Details
Description:

Tag details for PIT tagged fish detected in estuary wetland channels from juvenile salmon.

Distribution 4

CC ID: 851680
Start Date: 2017-02-16
End Date: Present
Download URL: https://www.webapps.nwfsc.noaa.gov/apex/parrdata/inventory/tables/table/pit_tag_downloaded_data
Distributor: Northwest Fisheries Science Center (NWFSC) (2015-10-01 - Present)
File Name: PIT Tag Downloaded Data
Description:

Downloaded data for PIT tagged fish detected in estuary wetland channels from juvenile salmon.

URLs

URL 1

CC ID: 851682
URL: https://www.webapps.nwfsc.noaa.gov/apex/parrdata/inventory/datasets/dataset/7955
Name: In-stream PIT detection, estuary wetlands
URL Type:
Online Resource
File Resource Format: Web site
Description:

NWFSC Dataset Information page. PIT detection data (residence time, travel time) in estuary wetland channels from juvenile salmon tagged by this project and other projects.

Technical Environment

Description:

Access Database

Data Quality

Accuracy:

High

Quality Control Procedures Employed:

Access database has some quality control measures. Data uploaded to PTAGIS undergo quality control measures maintained by the database manager. These data were collected and processed in accordance with established protocols and best practices under the direction of the project’s Principal Investigator. Contact the dataset Data Manager for full QA/QC methodology.

Data Management

Have Resources for Management of these Data Been Identified?: No
Approximate Percentage of Budget for these Data Devoted to Data Management: 5
Do these Data Comply with the Data Access Directive?: Yes
Is Access to the Data Limited Based on an Approved Waiver?: No
If Distributor (Data Hosting Service) is Needed, Please Indicate: No
Approximate Delay Between Data Collection and Dissemination: 0 days
If Delay is Longer than Latency of Automated Processing, Indicate Under What Authority Data Access is Delayed:

No Delay

Actual or Planned Long-Term Data Archive Location: Other
If World Data Center or Other, Specify: Pacific States Marine Fisheries Commission
Approximate Delay Between Data Collection and Archiving: 60
How Will the Data Be Protected from Accidental or Malicious Modification or Deletion Prior to Receipt by the Archive?:

Ptagis.org has protection and back up measures in place.

Lineage

Lineage Statement:

Some field collected data are manually entered to software at time of observation. Other data are imported into Access and then uploaded to regional database called PTAGIS.

Child Items

Rubric scores updated every 15m

Rubric Score Type Title
Entity PIT Tag Details
Entity PIT Tag Downloaded Data

Catalog Details

Catalog Item ID: 17979
GUID: gov.noaa.nmfs.inport:17979
Metadata Record Created By: Jeffrey W Cowen
Metadata Record Created: 2013-01-30 18:25+0000
Metadata Record Last Modified By: SysAdmin InPortAdmin
Metadata Record Last Modified: 2022-08-09 17:11+0000
Metadata Record Published: 2019-06-04
Owner Org: NWFSC
Metadata Publication Status: Published Externally
Do Not Publish?: N
Metadata Last Review Date: 2019-06-04
Metadata Review Frequency: 1 Year
Metadata Next Review Date: 2020-06-04