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Summary

Short Citation
Pacific Islands Fisheries Science Center, 2025: National Coral Reef Monitoring Program: Benthic Cover Derived from Analysis of Benthic Images Collected for Climate Stations across American Samoa since 2015, https://www.fisheries.noaa.gov/inport/item/25383.
Full Citation Examples

DOI: https://doi.org/10.7289/v5z31wzh

Abstract

The coral reef benthic community data described here result from the annotation (classification) of benthic images collected during photoquadrat surveys conducted by the NOAA Pacific Islands Fisheries Science Center (PIFSC), Ecosystem Sciences Division (ESD, formerly the Coral Reef Ecosystem Division) as part of NOAA's ongoing National Coral Reef Monitoring Program (NCRMP). The photoquadrat surveys were conducted at coral reef sites according to protocols established by ESD and NCRMP during ESD-led NCRMP missions to American Samoa in 2015, 2018, and 2023.

SCUBA divers conducted benthic photoquadrat surveys at permanent sites established in coral reef habitats by ESD. A select number of these sites were chosen in hard-bottom habitat at ~15-m depths, and a subset of the permanent sites (climate stations) were established at north, south, east, and west points around each of the islands and atolls. The divers estimated and delineated each sites rectangular perimeter by temporarily placing measuring tapes with 1-m markers starting from a permanently installed reference stake on the reef. Along the nearshore 10-m side of the survey site and the downslope 5-m side, the measuring tapes marked every meter of the L-shaped 15-m transect used for photoquadrat documentation. The divers photographed the reef at 1-m intervals on both sides of the 15-m tape, generating 30 photographs per survey site.

The benthic habitat images were quantitatively analyzed using Coral Point Count with Excel extensions (CPCe; Kohler and Gill, 2006) software from 2010-2014 and the web-based annotation tool, CoralNet (Beijbom et al. 2015), from 2015 to present. Ten points were randomly overlaid on each image and human analysts identified the organism or type of substrate beneath, with 300 annotations (points) generated per site. Benthic elements falling under each point were identified to genus/morphology for hard corals, and to genus/functional group for algae, invertebrates, and other taxa following Lozada-Misa et al. (2017). In general, the analysis resulted in three levels of benthic community data, including taxa group Tier 1 (e.g., coral, soft coral, macroalgae, turf algae, etc.), Tier 2 (e.g., Coral = massive hard coral, branching hard coral, foliose hard coral, encrusting hard coral, etc.; Macroalga = upright macroalgae), and Tier 3 (e.g., Coral = Astreopora sp, Favia sp, Pocillopora, etc.; Macroalgae = Caulerpa sp, Dictyosphaeria sp, Padina sp, etc.). If Tier 3 resolution is not possible, the next finest resolution is used.. These benthic data can ultimately be used to produce estimates of relative abundance (percentage of benthic cover), frequency of occurrence, benthic community taxonomic composition, and relative generic richness.

Climate stations are 3-4 sites per island that were selected in a stratified random fashion to be roughly equally spaced around the island, along the 15 m contour, on hard bottom, and at least 1 km away from a river mouth or embayment. Once selected we assess multiple features of the coral reef environment including in-situ temperature (STR), seawater carbonate, net carbonate accretion (CAU), bioerosion (BMU), and cryptobiota diversity (ARMS).

These data can be accessed online via the NOAA National Centers for Environmental Information (NCEI) Ocean Archive.

Distribution Information

  • CSV - Comma Separated Values (Text)

    Image analysis data derived from photoquadrat benthic images at NCRMP climate stations and permanent sites across American Samoa in 2023 by the NOAA Ecosystem Science Division (ESD)

  • CSV - Comma Separated Values (Text), 19.49MB

    Image analysis data derived from photoquadrat benthic images at NCRMP climate stations and permanent sites across American Samoa in 2018 by the NOAA Ecosystem Science Division (ESD)

  • CSV - Comma Separated Values (Text), 28.59Mb

    Image analysis data derived from photoquadrat benthic images at NCRMP climate stations and permanent sites across American Samoa in 2015 by the NOAA Coral Reef Ecosystem Program (CREP)

Access Constraints:

None

Use Constraints:

Please cite NOAA Ecosystem Science Division (ESD) when using the data.

Example:

Ecosystem Science Division (ESD); Pacific Islands Fisheries Science Center (2016). National Coral Reef Monitoring Program: Benthic Percent Cover Derived from Analysis of Benthic Images Collected for Climate Stations across American Samoa in 2015, 2018, and 2023. NOAA's National Center for Environmental Information, https://www.fisheries.noaa.gov/inport/item/25383

Controlled Theme Keywords

BENTHIC, biota, COMMUNITY DYNAMICS, CORAL REEF, DOC/NOAA/NMFS/PIFSC/ESD

Contact Information

Point of Contact
Thomas Oliver
thomas.oliver@noaa.gov
(808)725-5444

Metadata Contact
Lori H Luers
lori.luers@noaa.gov

Extents

Geographic Area 1

-171.09222° W, -168.13792° E, -11.0457° N, -14.559317° S

Time Frame 1
2015-02-15 - 2015-03-26

ASRAMP 2015

Time Frame 2
2023-06-30 - 2023-08-08

RA2301

Time Frame 3
2018-06-19 - 2018-07-16

ASRAMP 2018