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Item Identification

Title: Genetic Analysis Database
Status: In Work
Abstract:

Samples of skin and other tissues are collected from marine mammals along the U.S. east coast by a variety of researchers. Samples may be collected from live animals through remote biopsy or live-capture, stranded animals, or animals captured incidentally during fishery operations. DNA is extracted from these samples, sequenced, and analyzed using a variety of methods to support phylogenetic studies, stock delineation studies, and a variety of other analyses related to cetacean genetics in U.S. waters. These data sets include the sequence and other genetic data collected from these samples along with analytical results. These data contribute to delineation of stocks described in annual Marine Mammal Protection Act stock assessment reports.

Purpose:

To study genetic relationships and phylogeny of ceteceans.

Notes:

Databases of genetic data collected from marine mammal tissue samples including sexes, genetic sequence data, microsattellite markers, sNPs, etc. Collected data are in a variety of formats with variable levels of QA/QC depending upon the project status. Some data records may be confidential as the database includes information collected by students and guest researchers working in the lab.

Keywords

Theme Keywords

Thesaurus Keyword
UNCONTROLLED
None genetic data
None marine mammal
None microsattellite markers
None sNPs
None tissue samples

Temporal Keywords

Thesaurus Keyword
UNCONTROLLED
None 1999-present

Spatial Keywords

Thesaurus Keyword
UNCONTROLLED
None atlantic ocean
None caribbean
None gulf of mexico

Support Roles

Data Steward

CC ID: 210254
Date Effective From: 1999
Date Effective To:
Contact (Person): Garrison, Lance
Address: 75 Virginia Beach Dr
Miami, FL 33149
Email Address: Lance.Garrison@noaa.gov
Phone: 305-361-4488
Fax: 305-361-4478
Business Hours: 8:00 AM - 4:30 PM EST/EDT

Point of Contact

CC ID: 210263
Date Effective From: 2004
Date Effective To:
Contact (Person): Rosel, Patricia
Address: 646 Cajundome Blvd
Lafayette, LA 70506-4291
Email Address: patricia.rosel@noaa.gov
Phone: 337-291-2123
Fax: 337-291-2106

Extents

Currentness Reference: Ground Condition

Extent Group 1

Extent Group 1 / Geographic Area 1

CC ID: 210253
W° Bound: -98.1
E° Bound: -65.5
N° Bound: 44.7
S° Bound: 17.5

Extent Group 1 / Time Frame 1

CC ID: 210252
Time Frame Type: Continuing
Start: 1999

Child Items

Rubric scores updated every 15m

Rubric Score Type Title
57
Data Set Genetic Analysis Database

Catalog Details

Catalog Item ID: 25883
GUID: gov.noaa.nmfs.inport:25883
Metadata Record Created By: Lee M Weinberger
Metadata Record Created: 2015-07-10 06:31+0000
Metadata Record Last Modified By: SysAdmin InPortAdmin
Metadata Record Last Modified: 2022-08-09 17:11+0000
Metadata Record Published: 2021-04-29
Owner Org: SEFSC
Metadata Publication Status: Published Externally
Do Not Publish?: N
Metadata Last Review Date: 2021-04-29
Metadata Review Frequency: 1 Year
Metadata Next Review Date: 2022-04-29