Genetic Analysis Database
Project (PRJ) | Southeast Fisheries Science Center (SEFSC)GUID: gov.noaa.nmfs.inport:25883 | Updated: August 9, 2022 | Published / External
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Summary
Samples of skin and other tissues are collected from marine mammals along the U.S. east coast by a variety of researchers. Samples may be collected from live animals through remote biopsy or live-capture, stranded animals, or animals captured incidentally during fishery operations. DNA is extracted from these samples, sequenced, and analyzed using a variety of methods to support phylogenetic studies, stock delineation studies, and a variety of other analyses related to cetacean genetics in U.S. waters. These data sets include the sequence and other genetic data collected from these samples along with analytical results. These data contribute to delineation of stocks described in annual Marine Mammal Protection Act stock assessment reports.
Child Items
Type | Title |
---|---|
Data Set | Genetic Analysis Database |
Contact Information
Point of Contact
Patricia Rosel
patricia.rosel@noaa.gov
337-291-2123
Extents
-98.1° W,
-65.5° E,
44.7° N,
17.5° S
1999 - Present
Item Identification
Title: | Genetic Analysis Database |
---|---|
Status: | In Work |
Abstract: |
Samples of skin and other tissues are collected from marine mammals along the U.S. east coast by a variety of researchers. Samples may be collected from live animals through remote biopsy or live-capture, stranded animals, or animals captured incidentally during fishery operations. DNA is extracted from these samples, sequenced, and analyzed using a variety of methods to support phylogenetic studies, stock delineation studies, and a variety of other analyses related to cetacean genetics in U.S. waters. These data sets include the sequence and other genetic data collected from these samples along with analytical results. These data contribute to delineation of stocks described in annual Marine Mammal Protection Act stock assessment reports. |
Purpose: |
To study genetic relationships and phylogeny of ceteceans. |
Notes: |
Databases of genetic data collected from marine mammal tissue samples including sexes, genetic sequence data, microsattellite markers, sNPs, etc. Collected data are in a variety of formats with variable levels of QA/QC depending upon the project status. Some data records may be confidential as the database includes information collected by students and guest researchers working in the lab. |
Keywords
Theme Keywords
Thesaurus | Keyword |
---|---|
UNCONTROLLED | |
None | genetic data |
None | marine mammal |
None | microsattellite markers |
None | sNPs |
None | tissue samples |
Temporal Keywords
Thesaurus | Keyword |
---|---|
UNCONTROLLED | |
None | 1999-present |
Spatial Keywords
Thesaurus | Keyword |
---|---|
UNCONTROLLED | |
None | atlantic ocean |
None | caribbean |
None | gulf of mexico |
Support Roles
Data Steward
Date Effective From: | 1999 |
---|---|
Date Effective To: | |
Contact (Person): | Garrison, Lance |
Address: |
75 Virginia Beach Dr Miami, FL 33149 |
Email Address: | Lance.Garrison@noaa.gov |
Phone: | 305-361-4488 |
Fax: | 305-361-4478 |
Business Hours: | 8:00 AM - 4:30 PM EST/EDT |
Point of Contact
Date Effective From: | 2004 |
---|---|
Date Effective To: | |
Contact (Person): | Rosel, Patricia |
Address: |
646 Cajundome Blvd Lafayette, LA 70506-4291 |
Email Address: | patricia.rosel@noaa.gov |
Phone: | 337-291-2123 |
Fax: | 337-291-2106 |
Extents
Currentness Reference: | Ground Condition |
---|
Extent Group 1
Extent Group 1 / Geographic Area 1
W° Bound: | -98.1 | |
---|---|---|
E° Bound: | -65.5 | |
N° Bound: | 44.7 | |
S° Bound: | 17.5 |
Extent Group 1 / Time Frame 1
Time Frame Type: | Continuing |
---|---|
Start: | 1999 |
Child Items
Rubric scores updated every 15m
Type | Title | |
---|---|---|
Data Set | Genetic Analysis Database |
Catalog Details
Catalog Item ID: | 25883 |
---|---|
GUID: | gov.noaa.nmfs.inport:25883 |
Metadata Record Created By: | Lee M Weinberger |
Metadata Record Created: | 2015-07-10 06:31+0000 |
Metadata Record Last Modified By: | SysAdmin InPortAdmin |
Metadata Record Last Modified: | 2022-08-09 17:11+0000 |
Metadata Record Published: | 2021-04-29 |
Owner Org: | SEFSC |
Metadata Publication Status: | Published Externally |
Do Not Publish?: | N |
Metadata Last Review Date: | 2021-04-29 |
Metadata Review Frequency: | 1 Year |
Metadata Next Review Date: | 2022-04-29 |