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Item Identification

Title: NOAA_SEFSC_GoMMAPPS_GU1703_BiopsySamples_20211115.csv
Short Name: Biopsy Samples
Status: Completed
Abstract:

Biopsy samples with sample ID and location:

Purpose:

Main goal is to provide biopsySampleID with sighting number, species, and location where samples were collected

Entity Information

Entity Type: Data Table
Active Version?: Yes
Description:

Behavioral Observations Table

Data Attributes

Attribute Summary

Rubric Score Primary Key? Name Type Description
100
surveyEventID Character Unique identifier to a survey (vessel or aircraft based) event. For vessel survey: composed of the vessel's acronym followed by a 2-digit survey year and a 2-digit consecutive mission-number on that vessel (a.k.a cruise code). Cruise name / Cruise Number
100
eventdate time Local date-time during data recording.
100
sightingNumber numeric The unique identifier for the marine mammal sighting
100
Primary Key biopsySampleID character Unique Id Associated with the sample
100
scientificName character The scientific name of the marine mammal sighted.
100
vernacularName character The vernacular name of the marine mammal sighted.
100
platformLatitude Numeric The latitude of the platform at the moment of data recording.
100
platformLongitude Numeric The latitude of the platform at the moment of data recording
100
biopsySamplingDevice Character Device Used To Collect Sample
100
biopsyPunchSize character Size Of Sample Taken
100
platformVLTS character One-character string to flag survey platform type for visual line transect surveys. For aerial surveys: All records flagged “A” For boat-based surveys: All records flagged “B”.
100
geodeticDatum character The ellipsoid, geodetic datum, or spatial reference system (SRS) upon which the geographic coordinates given in decimal Latitude and decimal Longitude as based.
100
higherInstitutionCode Character Institution codes, in the form of abbreviated institution names, separated by semicolons, that define the hierarchy of institutions within which the data originator operates. Includes the originating institution as the lowest level (rightmost) code.
100
permitnumber character Research permit number issued by the National Marine Fisheries Service (NMFS) to the Southeast Fisheries Science Center (SEFSC) for research activities on marine mammals.
100
platformAttributes character Model, name and/or other proper characteristics of the platform where the survey was conducted. For vessel: e.g. NOAA Ship Gordon Gunter, NOAA Ship Pisces. For aerial survey: e.g. NOAA De Havilland DHC-6-300 Twin Otter.
100
relatedProjectProgram character Official project and/or program under which the survey was conducted (e.g. AMAPPS, GoMMAPPS). If applicable.
100
samplingProtocol character The names of, references to, or descriptions of the methods or protocols used during an Event. Public URL to survey and/or cruise reports if available.

Attribute Details

surveyEventID

CC ID: 1112230
Seq. Order: 10
Data Storage Type: Character
Max Length: 6
Min Length: 6
Required: Yes
Primary Key: No
Status: Active
Description:

Unique identifier to a survey (vessel or aircraft based) event. For vessel survey: composed of the vessel's acronym followed by a 2-digit survey year and a 2-digit consecutive mission-number on that vessel (a.k.a cruise code).

Cruise name / Cruise Number

Derivation:

Made up of a combination of

a two character Boat Abbreviation : GU = Gordon Gunther

a two digit year: 18 for 2018

a two digit cruise number: 01 for first cruise of the year

eventdate

CC ID: 1112205
Seq. Order: 40
Data Storage Type: time
Required: Yes
Primary Key: No
Status: Active
Description:

Local date-time during data recording.

Format Mask: YYYY-MM-DDHH24:MN:SS

sightingNumber

CC ID: 1112228
Seq. Order: 50
Data Storage Type: numeric
Max Length: 4
Required: Yes
Primary Key: No
Status: Active
Description:

The unique identifier for the marine mammal sighting

biopsySampleID

CC ID: 1112223
Seq. Order: 53
Data Storage Type: character
Max Length: 11
Required: Yes
Primary Key: Yes
Status: Active
Description:

Unique Id Associated with the sample

scientificName

CC ID: 1112227
Seq. Order: 60
Data Storage Type: character
Max Length: 80
Required: Yes
Primary Key: No
Status: Active
Description:

The scientific name of the marine mammal sighted.

vernacularName

CC ID: 1112234
Seq. Order: 65
Data Storage Type: character
Required: Yes
Primary Key: No
Status: Active
Description:

The vernacular name of the marine mammal sighted.

platformLatitude

CC ID: 1112220
Seq. Order: 70
Data Storage Type: Numeric
Required: Yes
Primary Key: No
Status: Active
Description:

The latitude of the platform at the moment of data recording.

Unit of Measure: degrees latitude

platformLongitude

CC ID: 1112221
Seq. Order: 71
Data Storage Type: Numeric
Required: Yes
Primary Key: No
Status: Active
Description:

The latitude of the platform at the moment of data recording

Unit of Measure: Degrees Longitude

biopsySamplingDevice

CC ID: 1112218
Seq. Order: 72
Data Storage Type: Character
Max Length: 20
Required: Yes
Primary Key: No
Status: Active
Description:

Device Used To Collect Sample

biopsyPunchSize

CC ID: 1112237
Seq. Order: 74
Data Storage Type: character
Max Length: 20
Required: Yes
Primary Key: No
Status: Active
Description:

Size Of Sample Taken

platformVLTS

CC ID: 1112222
Seq. Order: 210
Data Storage Type: character
Max Length: 1
Min Length: 1
Required: Yes
Primary Key: No
Status: Active
Description:

One-character string to flag survey platform type for visual line transect surveys. For aerial surveys: All records flagged “A” For boat-based surveys: All records flagged “B”.

geodeticDatum

CC ID: 1112209
Seq. Order: 220
Data Storage Type: character
Required: Yes
Primary Key: No
Status: Active
Description:

The ellipsoid, geodetic datum, or spatial reference system (SRS) upon which the geographic coordinates given in decimal Latitude and decimal Longitude as based.

higherInstitutionCode

CC ID: 1112210
Seq. Order: 230
Data Storage Type: Character
Required: Yes
Primary Key: No
Status: Active
Description:

Institution codes, in the form of abbreviated institution names, separated by semicolons, that define the hierarchy of institutions within which the data originator operates. Includes the originating institution as the lowest level (rightmost) code.

permitnumber

CC ID: 1112217
Seq. Order: 235
Data Storage Type: character
Max Length: 120
Required: Yes
Primary Key: No
Status: Active
Description:

Research permit number issued by the National Marine Fisheries Service (NMFS) to the Southeast Fisheries Science Center (SEFSC) for research activities on marine mammals.

platformAttributes

CC ID: 1112219
Seq. Order: 240
Data Storage Type: character
Required: Yes
Primary Key: No
Status: Active
Description:

Model, name and/or other proper characteristics of the platform where the survey was conducted. For vessel: e.g. NOAA Ship Gordon Gunter, NOAA Ship Pisces. For aerial survey: e.g. NOAA De Havilland DHC-6-300 Twin Otter.

relatedProjectProgram

CC ID: 1112224
Seq. Order: 250
Data Storage Type: character
Max Length: 100
Required: Yes
Primary Key: No
Status: Active
Description:

Official project and/or program under which the survey was conducted (e.g. AMAPPS, GoMMAPPS). If applicable.

samplingProtocol

CC ID: 1112226
Seq. Order: 270
Data Storage Type: character
Required: Yes
Primary Key: No
Status: Active
Description:

The names of, references to, or descriptions of the methods or protocols used during an Event. Public URL to survey and/or cruise reports if available.

Support Roles

Distributor

CC ID: 1112238
Date Effective From: 2021
Date Effective To:
Contact (Organization): National Centers for Environmental Information - Silver Spring, Maryland (NCEI-MD)
Address: NOAA/NESDIS E/OC SSMC3, 4th Floor, 1351 East-West Highway
Silver Spring, MD 20910-3282
Phone: (301) 713-3277

Distribution Information

Distribution 1

CC ID: 1112239
Start Date: 2021
End Date: Present
Download URL: https://www.nodc.noaa.gov/archive/arc0191/0243654/1.1/data/0-data/NOAA_SEFSC_GoMMAPPS_GU1703_VisualSightingData/NOAA_SEFSC_GoMMAPPS_GU1703_VisualSightingData/NOAA_SEFSC_GoMMAPPS_GU1703_BiopsySamples_20211115.csv
Distributor: National Centers for Environmental Information - Silver Spring, Maryland (NCEI-MD) (2021 - Present)
File Name: NOAA_SEFSC_GoMMAPPS_GU1703_BiopsySamples_20211115.csv
Description:

Behavioral observations table

File Date/Time: 2021-11-15 13:43:00
File Type: .csv
File Size: 844
Compression: Uncompressed
Review Status: Chked Viruses Inapp Content

Catalog Details

Catalog Item ID: 65979
GUID: gov.noaa.nmfs.inport:65979
Metadata Record Created By: Lee M Weinberger
Metadata Record Created: 2021-12-17 19:59+0000
Metadata Record Last Modified By: Lee M Weinberger
Metadata Record Last Modified: 2022-09-23 10:52+0000
Metadata Record Published: 2022-09-23
Owner Org: SEFSC
Metadata Publication Status: Published Externally
Do Not Publish?: N
Metadata Last Review Date: 2021-12-19
Metadata Review Frequency: 1 Year
Metadata Next Review Date: 2022-12-19