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SEFSC Metadata Library > POPULATION & ECOSYSTEMS MONITORING DIV > Other Protected Resources Projects > Acropora demographic monitoring > CRCP-Acropora palmata fragment outplants: evalu... >

Data_Table_msat_genotypes

Entity (ENT)  |  Southeast Fisheries Science Center (SEFSC)
GUID: gov.noaa.nmfs.inport:36887  |  Updated: August 9, 2022  |  Published / External 
Summary
Item Identification
Entity Info
Data Attributes
Catalog Details

Summary

Abstract

Dataset contains condition and size of outplanted, cultured fragments of elkhorn coral, Acropora palmata, observed in two separate experiments

Description

Genotypes identified by 5 microsatellite markers according to: Baums IB, Hughes CR, and Hellberg M. 2005. Mendelian microsatellite loci for the Caribbean hard coral Acropora palmata. Mar Ecol Prog Ser 288:115-127

Entity Information

Entity Type
Spreadsheet

Data Attribute / Type Description
Full_Genet_Name
Character 		working name of the elkhorn coral genotype, generally taken from the location of origin
166_1
Number 		First allele for locus 166 (Baums et al. 2005)
166_2
Number 		Second allele for locus 166 (Baums et al. 2005)
181_1
Number 		First allele for locus 181 (Baums et al. 2005)
181_2
Number 		Second allele for locus 181 (Baums et al. 2005)
182_1
Number 		First allele for locus 182 (Baums et al. 2005)
182_2
Number 		Second allele for locus 182 (Baums et al. 2005)
192_1
Number 		First allele for locus 192 (Baums et al. 2005)
192_2
Number 		Second allele for locus 192 (Baums et al. 2005)
207_1
Number 		First allele for locus 207 (Baums et al. 2005)
207_2
Number 		Second allele for locus 207 (Baums et al. 2005)
Clonal_ID
Character 		Standard identification for the multilocus genotype assigned by Baums, Penn State Univ.

Child Items

No Child Items for this record.

Contact Information

No contact information is available for this record.

Please contact the owner organization (SEFSC) for inquiries on this record.

Item Identification

Title: Data_Table_msat_genotypes
Abstract:

Dataset contains condition and size of outplanted, cultured fragments of elkhorn coral, Acropora palmata, observed in two separate experiments
Purpose:

To evaluate the performance of restocked, nursery-raised elkhorn coral fragments (Acropora palmata) in various conditions

Entity Information

Entity Type: Spreadsheet
Description:

Genotypes identified by 5 microsatellite markers according to: Baums IB, Hughes CR, and Hellberg M. 2005. Mendelian microsatellite loci for the Caribbean hard coral Acropora palmata. Mar Ecol Prog Ser 288:115-127

Data Attributes

Attribute Summary

Rubric Score Primary Key? Name Type Description
100
 Full_Genet_Name Character working name of the elkhorn coral genotype, generally taken from the location of origin
100
 166_1 Number First allele for locus 166 (Baums et al. 2005)
100
 166_2 Number Second allele for locus 166 (Baums et al. 2005)
100
 181_1 Number First allele for locus 181 (Baums et al. 2005)
100
 181_2 Number Second allele for locus 181 (Baums et al. 2005)
100
 182_1 Number First allele for locus 182 (Baums et al. 2005)
100
 182_2 Number Second allele for locus 182 (Baums et al. 2005)
100
 192_1 Number First allele for locus 192 (Baums et al. 2005)
100
 192_2 Number Second allele for locus 192 (Baums et al. 2005)
100
 207_1 Number First allele for locus 207 (Baums et al. 2005)
100
 207_2 Number Second allele for locus 207 (Baums et al. 2005)
100
 Clonal_ID Character Standard identification for the multilocus genotype assigned by Baums, Penn State Univ.

Attribute Details

Full_Genet_Name

CC ID: 383546
Seq. Order: 1
Data Storage Type: Character
Max Length: 30
Required: No
Primary Key: No
Status: Active
Description:

working name of the elkhorn coral genotype, generally taken from the location of origin

166_1

CC ID: 383547
Seq. Order: 2
Data Storage Type: Number
Max Length: 3
Required: No
Primary Key: No
Status: Active
Description:

First allele for locus 166 (Baums et al. 2005)

166_2

CC ID: 383548
Seq. Order: 3
Data Storage Type: Number
Max Length: 3
Required: No
Primary Key: No
Status: Active
Description:

Second allele for locus 166 (Baums et al. 2005)

181_1

CC ID: 383549
Seq. Order: 4
Data Storage Type: Number
Max Length: 3
Required: No
Primary Key: No
Status: Active
Description:

First allele for locus 181 (Baums et al. 2005)

181_2

CC ID: 383550
Seq. Order: 5
Data Storage Type: Number
Max Length: 3
Required: No
Primary Key: No
Status: Active
Description:

Second allele for locus 181 (Baums et al. 2005)

182_1

CC ID: 383551
Seq. Order: 6
Data Storage Type: Number
Max Length: 3
Required: No
Primary Key: No
Status: Active
Description:

First allele for locus 182 (Baums et al. 2005)

182_2

CC ID: 383552
Seq. Order: 7
Data Storage Type: Number
Max Length: 3
Required: No
Primary Key: No
Status: Active
Description:

Second allele for locus 182 (Baums et al. 2005)

192_1

CC ID: 383553
Seq. Order: 8
Data Storage Type: Number
Max Length: 3
Required: No
Primary Key: No
Status: Active
Description:

First allele for locus 192 (Baums et al. 2005)

192_2

CC ID: 383555
Seq. Order: 9
Data Storage Type: Number
Max Length: 3
Required: No
Primary Key: No
Status: Active
Description:

Second allele for locus 192 (Baums et al. 2005)

207_1

CC ID: 383557
Seq. Order: 10
Data Storage Type: Number
Max Length: 3
Required: No
Primary Key: No
Status: Active
Description:

First allele for locus 207 (Baums et al. 2005)

207_2

CC ID: 383558
Seq. Order: 11
Data Storage Type: Number
Max Length: 3
Required: No
Primary Key: No
Status: Active
Description:

Second allele for locus 207 (Baums et al. 2005)

Clonal_ID

CC ID: 383559
Seq. Order: 12
Data Storage Type: Character
Max Length: 5
Required: No
Primary Key: No
Status: Active
Description:

Standard identification for the multilocus genotype assigned by Baums, Penn State Univ.

Catalog Details

Catalog Item ID: 36887
GUID: gov.noaa.nmfs.inport:36887
Metadata Record Created By: David Huddleston
Metadata Record Created: 2017-02-23 15:29+0000
Metadata Record Last Modified By: SysAdmin InPortAdmin
Metadata Record Last Modified: 2022-08-09 17:11+0000
Metadata Record Published: 2022-04-27
Owner Org: SEFSC
Metadata Publication Status: Published Externally
Do Not Publish?: N
Metadata Last Review Date: 2022-04-27
Metadata Review Frequency: 1 Year
Metadata Next Review Date: 2023-04-27