Search Help Show/Hide Menu
Summary
Item Identification
Keywords
Data Set Info
Support Roles
Extents
Access Info
Distribution Info
URLs
Data Quality
Data Management
Child Items
Catalog Details

Summary

Short Citation
Southeast Fisheries Science Center, 2024: Density of Cetaceans and Turtles in the Gulf of Mexico, https://www.fisheries.noaa.gov/inport/item/70316.
Full Citation Examples

Abstract

The goal of this research was to develop Gulf-wide cetacean and sea turtle spatial density models (SDMs) based on line-transect surveys conducted in the U.S. waters of the Gulf of Mexico. Surveys used to develop the SDMs for species occupying continental shelf and oceanic waters of the Gulf of Mexico were conducted during the Gulf of Mexico Marine Assessment Program for Protected Species (GoMMAPPS) project and comparable-prior-year surveys. Aerial survey data from seasonal surveys conducted during 2011/2012 and 2017/2018 (GoMMAPPS Surveys) were used to develop SDMs for cetacean and sea turtle species over the continental shelf. Data collected from vessel surveys, including the two-team surveys conducted during summer 2017, winter 2018, and summer/fall 2018 (GoMMAPPS Surveys) and 2003, 2004, and 2009 (that included only one survey team), were used to develop SDMs for cetaceans in oceanic waters. In addition, for Rice's whale, surveys conducted in 2018 and 2019 were also used in developing the SDMs specific for this species.

Habitat-based SDMs were developed using a generalized additive modeling (GAM) framework to determine the relationship between cetacean and sea turtle abundance and environmental variables. Samples for modeling were created by summarizing survey effort and environmental variables with a hexagon grid developed by the Environmental Protection Agency expanded to fit the entire Gulf of Mexico. The grid was created in a Lambert azimuthal equal area projection and the area of each hexagon is 40 km2. For all hexagons that contained survey effort segments, cetacean and sea turtle density was calculated using total number of animals observed, segment effort length and average sighting condition covariates in the hexagon, and the parameters estimated in distance sampling abundance models. A total of 19 SDMs were developed for individual or groups of species. For each modeled taxon, predictions were made for the period 2015-2019 on the hexagon grid, summarized into mean monthly densities for the 5-year period, and then resampled into traditional raster grids. Models were extrapolated beyond the U.S. waters of the Gulf of Mexico to provide insight into potential high density areas throughout the Gulf. However, extrapolations of this type should be interpreted with caution. This website contains the predictions as raster grids. The hexagon predictions are available as shapefiles in NCEI Accession 0256800. These models can be used by managers and federal agencies to assist with population assessments, environmental impact analyses, and conservation of these species.

As of October 2022, these are the latest available models for the Gulf of Mexico produced from NOAA Southeast Fisheries Science Center (SEFSC) surveys. The prior series of Gulf of Mexico models, produced by a collaboration between the Duke Marine Geospatial Ecology Lab (MGEL) and SEFSC and published as Roberts et al. 2016, are archived here. As of October 2022, SEFSC and MGEL consider the Roberts et al. 2016 models obsolete and recommend the GoMMAPPS models available here be used instead.

Distribution Information

Access Constraints:

None

Use Constraints:

The files that accompany this document were developed by the National Oceanic

and Atmospheric Administration and are therefore a work of the United States

government that is in the public domain. As such this work may be freely

distributed and copied however, it is requested that in any subsequent uses

of this work, NOAA be given appropriate acknowledgement.

Controlled Theme Keywords

Balaenoptera ricei, Caretta caretta, CETACEANS, Chelonia mydas, Dermochelys coriacea, DOC/NOAA/NESDIS/NCEI, DOC/NOAA/NESDIS/NODC, DOC/NOAA/NMFS/SEFSC, DOLPHINS, Feresa attenuata, Globicephala, Grampus griseus, Kogia, Lepidochelys kempii, MARINE MAMMALS, Mesoplodon, Orcinus orca, Peponocephala electra, Physeter macrocephalus, Pseudorca crassidens, SEA TURTLES, Stenella attenuata, Stenella clymene, Stenella coeruleoalba, Stenella frontalis, Stenella longirostris, Tursiops truncatus, Ziphius

Contact Information

Metadata Contact
Laura A Dias
laura.dias@noaa.gov
(305) 361-4269

Extents

Geographic Area 1

-97.65° W, -80.366° E, 30.983° N, 17.766° S

Time Frame 1
2003 - 2019

Item Identification

Title: Density of Cetaceans and Turtles in the Gulf of Mexico
Status: Completed
Creation Date: 2022
Publication Date: 2023
Abstract:

The goal of this research was to develop Gulf-wide cetacean and sea turtle spatial density models (SDMs) based on line-transect surveys conducted in the U.S. waters of the Gulf of Mexico. Surveys used to develop the SDMs for species occupying continental shelf and oceanic waters of the Gulf of Mexico were conducted during the Gulf of Mexico Marine Assessment Program for Protected Species (GoMMAPPS) project and comparable-prior-year surveys. Aerial survey data from seasonal surveys conducted during 2011/2012 and 2017/2018 (GoMMAPPS Surveys) were used to develop SDMs for cetacean and sea turtle species over the continental shelf. Data collected from vessel surveys, including the two-team surveys conducted during summer 2017, winter 2018, and summer/fall 2018 (GoMMAPPS Surveys) and 2003, 2004, and 2009 (that included only one survey team), were used to develop SDMs for cetaceans in oceanic waters. In addition, for Rice's whale, surveys conducted in 2018 and 2019 were also used in developing the SDMs specific for this species.

Habitat-based SDMs were developed using a generalized additive modeling (GAM) framework to determine the relationship between cetacean and sea turtle abundance and environmental variables. Samples for modeling were created by summarizing survey effort and environmental variables with a hexagon grid developed by the Environmental Protection Agency expanded to fit the entire Gulf of Mexico. The grid was created in a Lambert azimuthal equal area projection and the area of each hexagon is 40 km2. For all hexagons that contained survey effort segments, cetacean and sea turtle density was calculated using total number of animals observed, segment effort length and average sighting condition covariates in the hexagon, and the parameters estimated in distance sampling abundance models. A total of 19 SDMs were developed for individual or groups of species. For each modeled taxon, predictions were made for the period 2015-2019 on the hexagon grid, summarized into mean monthly densities for the 5-year period, and then resampled into traditional raster grids. Models were extrapolated beyond the U.S. waters of the Gulf of Mexico to provide insight into potential high density areas throughout the Gulf. However, extrapolations of this type should be interpreted with caution. This website contains the predictions as raster grids. The hexagon predictions are available as shapefiles in NCEI Accession 0256800. These models can be used by managers and federal agencies to assist with population assessments, environmental impact analyses, and conservation of these species.

As of October 2022, these are the latest available models for the Gulf of Mexico produced from NOAA Southeast Fisheries Science Center (SEFSC) surveys. The prior series of Gulf of Mexico models, produced by a collaboration between the Duke Marine Geospatial Ecology Lab (MGEL) and SEFSC and published as Roberts et al. 2016, are archived here. As of October 2022, SEFSC and MGEL consider the Roberts et al. 2016 models obsolete and recommend the GoMMAPPS models available here be used instead.

Purpose:

To provide a Gulf-wide cetacean and sea turtle spatial density models (SDMs) based on line-transect surveys conducted in the U.S. waters of the Gulf of Mexico presented as raster grids.

Keywords

Theme Keywords

Thesaurus Keyword
Global Change Master Directory (GCMD) Data Center Keywords
DOC/NOAA/NESDIS/NCEI > National Centers for Environmental Information, NESDIS, NOAA, U.S. Department of Commerce
Global Change Master Directory (GCMD) Data Center Keywords
DOC/NOAA/NESDIS/NODC > National Oceanographic Data Center, NESDIS, NOAA, U.S. Department of Commerce
Global Change Master Directory (GCMD) Data Center Keywords
DOC/NOAA/NMFS/SEFSC > Southeast Fisheries Science Center, National Marine Fisheries Service, NOAA, U.S. Department of Commerce
Global Change Master Directory (GCMD) Science Keywords
EARTH SCIENCE > BIOLOGICAL CLASSIFICATION > ANIMALS/VERTEBRATES > MAMMALS > CETACEANS
Global Change Master Directory (GCMD) Science Keywords
EARTH SCIENCE > BIOLOGICAL CLASSIFICATION > ANIMALS/VERTEBRATES > MARINE MAMMALS
Global Change Master Directory (GCMD) Science Keywords
EARTH SCIENCE > BIOLOGICAL CLASSIFICATION > ANIMALS/VERTEBRATES > MARINE MAMMALS > DOLPHINS
Global Change Master Directory (GCMD) Science Keywords
EARTH SCIENCE > BIOLOGICAL CLASSIFICATION > ANIMALS/VERTEBRATES > REPTILES > TURTLES > SEA TURTLES
World Register of Marine Species (WoRMS)
Balaenoptera ricei View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Caretta caretta View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Chelonia mydas View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Dermochelys coriacea View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Feresa attenuata View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Globicephala View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Grampus griseus View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Kogia View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Lepidochelys kempii View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Mesoplodon View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Orcinus orca View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Peponocephala electra View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Physeter macrocephalus View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Pseudorca crassidens View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Stenella attenuata View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Stenella clymene View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Stenella coeruleoalba View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Stenella frontalis View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Stenella longirostris View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Tursiops truncatus View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Ziphius View WoRMS Aphia Record
UNCONTROLLED
ESA/MMPA Permit Number 14450
ESA/MMPA Permit Number 779-1633
NODC DATA TYPES THESAURUS cetacean
NODC DATA TYPES THESAURUS DOLPHINS
NODC DATA TYPES THESAURUS MARINE MAMMALS
NODC DATA TYPES THESAURUS SEA TURTLES
NODC DATA TYPES THESAURUS species abundance
NODC PROJECT NAMES THESAURUS Gulf of Mexico Marine Assessment Program for Protected Species (GOMMAPPS)

Temporal Keywords

Thesaurus Keyword
UNCONTROLLED
None 2003-2019

Spatial Keywords

Thesaurus Keyword
Global Change Master Directory (GCMD) Location Keywords
OCEAN > ATLANTIC OCEAN > NORTH ATLANTIC OCEAN > CARIBBEAN SEA
Global Change Master Directory (GCMD) Location Keywords
OCEAN > ATLANTIC OCEAN > NORTH ATLANTIC OCEAN > GULF OF MEXICO
UNCONTROLLED
NODC SEA AREA NAMES THESAURUS Caribbean Sea
NODC SEA AREA NAMES THESAURUS Gulf of Mexico

Instrument Keywords

Thesaurus Keyword
Global Change Master Directory (GCMD) Instrument Keywords
BINOCULAR > BINOCULAR
Global Change Master Directory (GCMD) Instrument Keywords
INCLINOMETERS > INCLINOMETERS
Global Change Master Directory (GCMD) Instrument Keywords
VISUAL OBSERVATIONS > VISUAL OBSERVATIONS
UNCONTROLLED
NODC INSTRUMENT TYPES THESAURUS BIG EYE BINOCULARS
NODC INSTRUMENT TYPES THESAURUS Distance Sampling
NODC INSTRUMENT TYPES THESAURUS inclinometer
NODC INSTRUMENT TYPES THESAURUS Line Transect Sampling
NODC INSTRUMENT TYPES THESAURUS visual estimate
NODC INSTRUMENT TYPES THESAURUS visual observation

Platform Keywords

Thesaurus Keyword
Global Change Master Directory (GCMD) Platform Keywords
DHC-6 > DeHavilland Twin Otter
Global Change Master Directory (GCMD) Platform Keywords
Ships
UNCONTROLLED
NODC PLATFORM NAMES THESAURUS NOAA Ship Gordon Gunter
NODC PLATFORM NAMES THESAURUS NOAA Ship Pisces

Data Set Information

Data Set Scope Code: Data Set
Data Set Type: GIS Files
Maintenance Frequency: As Needed
Data Set Credit: Rappucci G, Garrison LP, Soldevilla M, Ortega-Ortiz J, Reid J, Aichinger-Dias L, Mullin K, Litz J. 2022. Gulf of Mexico Marine Assessment Program for Protected Species: Marine Mammals. New Orleans (LA): U.S. Department of the Interior, Bureau of Ocean Energy Management (In Prep).

Support Roles

Author

CC ID: 1262158
Date Effective From: 2022
Date Effective To:
Contact (Person): Litz, Jenny
Address: 75 Virginia Beach Drive
Miami, FL 33139
Email Address: Jenny.Litz@noaa.gov
Phone: 305-361-4224
Fax: 305-365-4102

Author

CC ID: 1262159
Date Effective From: 2022
Date Effective To:
Contact (Person): Rappucci, Gina
Address: 75 Virginia Beach Drive
Miami, FL 33149
Email Address: gina.rappucci@noaa.gov
Phone: (305) 361-4283

Author

CC ID: 1262160
Date Effective From: 2022
Date Effective To:
Contact (Person): Dias, Laura A
Address: 75 Virginia Beach Drive
Miami, FL 33149
Email Address: laura.dias@noaa.gov
Phone: (305) 361-4269
URL: ORCID Page Laura Dias

Author

CC ID: 1262161
Date Effective From: 2022
Date Effective To:
Contact (Person): Martinez, Anthony
Address: 75 Virginia Beach Drive
Miami, FL 33149
USA
Email Address: anthony.martinez@noaa.gov
Phone: 305-361-4486
Fax: 305-361-4478

Author

CC ID: 1262162
Date Effective From: 2022
Date Effective To:
Contact (Person): Soldevilla, Melissa
Address: 75 Virginia Beach Drive
Miami, FL 33149
USA
Email Address: melissa.soldevilla@noaa.gov
Phone: 305-361-4238

Author

CC ID: 1262164
Date Effective From: 2022
Date Effective To:
Contact (Person): Mullin, Keith D
Address: 3209 Frederic St.
Pascagoula, MS 39568
Email Address: keith.d.mullin@noaa.gov
Phone: 228-549-1632
Fax: 228-769-9200

Data Steward

CC ID: 1262157
Date Effective From: 2022
Date Effective To:
Contact (Person): Garrison, Lance
Address: 75 Virginia Beach Dr
Miami, FL 33149
Email Address: Lance.Garrison@noaa.gov
Phone: 305-361-4488
Fax: 305-361-4478
Business Hours: 8:00 AM - 4:30 PM EST/EDT

Data Steward

CC ID: 1262165
Date Effective From: 2022
Date Effective To:
Contact (Person): Litz, Jenny
Address: 75 Virginia Beach Drive
Miami, FL 33139
Email Address: Jenny.Litz@noaa.gov
Phone: 305-361-4224
Fax: 305-365-4102

Distributor

CC ID: 1262166
Date Effective From: 2022
Date Effective To:
Contact (Organization): OBIS-SEAMAP (OBIS-SEAMAP)
Address: Marine Geospatial Ecology Lab A328 Levine Science Rsch Ctr at Duke
Durham, NC 27708
Email Address: seamap-contact@duke.edu
Phone: 919-613-8021
URL: OBIS-SEAMAP Home Page

Metadata Contact

CC ID: 1262167
Date Effective From: 2022
Date Effective To:
Contact (Person): Dias, Laura A
Address: 75 Virginia Beach Drive
Miami, FL 33149
Email Address: laura.dias@noaa.gov
Phone: (305) 361-4269
URL: ORCID Page Laura Dias

Originator

CC ID: 1262168
Date Effective From: 2022
Date Effective To:
Contact (Organization): Southeast Fisheries Science Center (SEFSC)
Address: 75 Virginia Beach Drive
Miami, FL 33149
USA
Phone: (305)361-5761
URL: https://www.fisheries.noaa.gov/about/southeast-fisheries-science-center
Business Hours: 8:00 a.m. - 4:30 p.m. EST
View Historical Support Roles

Extents

Currentness Reference: Ground Condition

Extent Group 1

Extent Group 1 / Geographic Area 1

CC ID: 1262172
W° Bound: -97.65
E° Bound: -80.366
N° Bound: 30.983
S° Bound: 17.766

Extent Group 1 / Time Frame 1

CC ID: 1262173
Time Frame Type: Range
Start: 2003
End: 2019

Access Information

Security Class: Unclassified
Data Access Procedure:

Download from provided links

Data Access Constraints:

None

Data Use Constraints:

The files that accompany this document were developed by the National Oceanic

and Atmospheric Administration and are therefore a work of the United States

government that is in the public domain. As such this work may be freely

distributed and copied however, it is requested that in any subsequent uses

of this work, NOAA be given appropriate acknowledgement.

Metadata Access Constraints:

None

Metadata Use Constraints:

The files that accompany this document were developed by the National Oceanic

and Atmospheric Administration and are therefore a work of the United States

government that is in the public domain. As such this work may be freely

distributed and copied however, it is requested that in any subsequent uses

of this work, NOAA be given appropriate acknowledgement.

Distribution Information

Distribution 1

CC ID: 1262169
Start Date: 2023
End Date: Present
Download URL: https://seamap.env.duke.edu/seamap-models-files/SEFSC/GOM_all_models_20221005.zip
Distributor: OBIS-SEAMAP (OBIS-SEAMAP) (2022 - Present)
File Name: GOM_all_models_20221005.zip
Description:

all models in a single zip file. All documentation is included in that zip

File Type (Deprecated): Zip
File Size: 59.747 MB
Compression: Zip
Review Status: Chked Viruses Inapp Content

URLs

URL 1

CC ID: 1262156
URL: https://seamap.env.duke.edu/models/SEFSC/GOM/
Name: Density of Cetaceans and Turtles in the Gulf of Mexico 2022/2023 Edition
URL Type:
Online Resource
Description:

Gulf-wide cetacean and sea turtle spatial density models (SDMs) based on line-transect surveys conducted in the US waters of the GOM. Surveys used to develop the SDMs for species occupying continental shelf and oceanic waters of the Gulf of Mexico were conducted during the Gulf of Mexico Marine Assessment Program for Protected Species (GoMMAPPS) project and comparable-prior-year surveys. Aerial survey data from seasonal surveys conducted during 2011/2012 and 2017/2018 (GoMMAPPS Surveys) were used to develop SDMs for cetacean and sea turtle species over the continental shelf. Data collected from vessel surveys, including the two-team surveys conducted during summer 2017, winter 2018, and summer/fall 2018 (GoMMAPPS Surveys) and 2003, 2004, and 2009 (that included only one survey team), were used to develop SDMs for cetaceans in oceanic waters. In addition, for Rice's whale, surveys conducted in 2018 and 2019 were also used in developing the SDMs specific for this species.

URL 2

CC ID: 1262979
URL: https://seamap.env.duke.edu/help/dsm/dsm_help
Name: OBIS_SEAMAP Model Mapper for Predicted Species Density / Occurrence Online Help
URL Type:
Online Resource
Description:

The Model Mapper has been developed by OBIS-SEAMAP hosted by Marine Geospatial Ecology Lab, Duke University with contributions from partners. As the Model Mapper is a platform for different projects, models or products, its implementation differs by project. Most of the features described in this help are commonly available to all the projects but the interface and details may be different. The descriptions and screen shots are based on the Cetacen Density project.

URL 3

CC ID: 1262980
URL: https://seamap.env.duke.edu/models/Duke-EC-GOM-2015/
Name: Habitat-based cetacean density models for the U.S. Atlantic and Gulf of Mexico (2015 Version)
URL Type:
Online Resource
Description:

This has been Referred to as Roberts et al. 2016,

Models were created by

Northeast Fisheries Science Center / NOAA Fisheries, Southeast Fisheries Science Center / NOAA Fisheries, Department of Biology and Marine Biology / UNC Wilmington, Virginia Aquarium & Marine Science Center

These models are now considered obsolete

Data Quality

Quantitation Limits:

Note that several taxa were modeled with only static covariates and therefore will have the same predictions for each month.

Data Management

Have Resources for Management of these Data Been Identified?: No
Approximate Percentage of Budget for these Data Devoted to Data Management: Unknown
Do these Data Comply with the Data Access Directive?: Yes
Is Access to the Data Limited Based on an Approved Waiver?: No
If Distributor (Data Hosting Service) is Needed, Please Indicate: Already Provided at OBIS-SEAMAP
Actual or Planned Long-Term Data Archive Location: World Data Center (WDC) Facility
If World Data Center or Other, Specify: OBIS-SEAMAP

Catalog Details

Catalog Item ID: 70316
GUID: gov.noaa.nmfs.inport:70316
Metadata Record Created By: Lee M Weinberger
Metadata Record Created: 2023-07-23 03:02+0000
Metadata Record Last Modified By: SysAdmin InPortAdmin
Metadata Record Last Modified: 2023-08-15 17:09+0000
Metadata Record Published: 2023-07-25
Owner Org: SEFSC
Metadata Publication Status: Published Externally
Do Not Publish?: N
Metadata Last Review Date: 2023-07-23
Metadata Review Frequency: 1 Year
Metadata Next Review Date: 2024-07-23