NPRB1019_Fish_Histopath2
Entity (ENT) | National Centers for Coastal Ocean Science (NCCOS)GUID: gov.noaa.nmfs.inport:40991 | Updated: August 9, 2022 | Published / External
Item Identification
| Title: | NPRB1019_Fish_Histopath2 |
|---|---|
| Short Name: | NPRB1019_Fish_Histopath2 |
| Status: | Completed |
| Abstract: |
tab in NPRB-1019_Data Excel spreadsheet; represents fish sampling data | Description Source: Author |
| Notes: |
Converted from FGDC using 'fgdc_to_inport_xml_entity.pl' script. |
Data Attributes
Attribute Summary
|
|
Name | Type | Description |
|---|---|---|---|---|
|
100
|
Collection Date | NUMBER | Collection Date | Description Source: Author | |
|
100
|
Site | VARCHAR | Sampling site | Description Source: Author | |
|
100
|
Site Code | VARCHAR | Unique site Code | Description Source: Author | |
|
100
|
LatDeg | NUMBER | Latitude of a sampling site | Description Source: Author | |
|
100
|
LonDeg | NUMBER | Longitude of sampling site | Description Source: Author | |
|
100
|
Species | VARCHAR | Species of fish | Description Source: Author | |
|
100
|
Sex | VARCHAR | Sex of a specie | Description Source: Author | |
|
100
|
Number of fish analyzed | Unknown | Number of fish analyzed | Description Source: Author | |
|
100
|
Fish Length mm | NUMBER | Fish Length mm | Description Source: Author | |
|
100
|
Weight in Grams | NUMBER | Weight in Grams | Description Source: Author | |
|
100
|
Time Necropsis | NUMBER | Time Necropsis | Description Source: Author | |
|
100
|
Gross Lesions | VARCHAR | abnormalities noted by visual examination at gross necropsy in the external or internal appearance | Description Source: Author | |
|
100
|
Tissue type | VARCHAR | Fish tissue analyzed | Description Source: Author | |
|
100
|
Parameter | VARCHAR | Histopathology parameter (parasite, disease) measured | Description Source: Author | |
|
100
|
Data | VARCHAR | Presence or non-occurrence of histopathology parameters | Description Source: Author |
Attribute Details
Collection Date
CC ID: 528931
| Seq. Order: | 1 |
|---|---|
| Data Storage Type: | NUMBER |
| Required: | No |
| Primary Key: | No |
| Status: | Active |
| Description: |
Collection Date | Description Source: Author |
| Allowed Values: | 7/19/10 - 7/21/10 |
Site
CC ID: 528932
| Seq. Order: | 2 |
|---|---|
| Data Storage Type: | VARCHAR |
| Required: | No |
| Primary Key: | No |
| Status: | Active |
| Description: |
Sampling site | Description Source: Author |
| Allowed Values: | Nanwalek: Nanwalek | Port Graham: Port Graham | Seldovia: Seldovia | |
Site Code
CC ID: 528933
| Seq. Order: | 3 |
|---|---|
| Data Storage Type: | VARCHAR |
| Required: | No |
| Primary Key: | No |
| Status: | Active |
| Description: |
Unique site Code | Description Source: Author |
| Allowed Values: | NHA: Nanwalek | PHGA: Port Graham | SHA: Seldovia | |
LatDeg
CC ID: 528934
| Seq. Order: | 4 |
|---|---|
| Data Storage Type: | NUMBER |
| Required: | No |
| Primary Key: | No |
| Status: | Active |
| Description: |
Latitude of a sampling site | Description Source: Author |
| Allowed Values: | 59.351492 - 59.4532 |
LonDeg
CC ID: 528935
| Seq. Order: | 5 |
|---|---|
| Data Storage Type: | NUMBER |
| Required: | No |
| Primary Key: | No |
| Status: | Active |
| Description: |
Longitude of sampling site | Description Source: Author |
| Allowed Values: | -151.92089 - -151.5209 |
Species
CC ID: 528936
| Seq. Order: | 6 |
|---|---|
| Data Storage Type: | VARCHAR |
| Required: | No |
| Primary Key: | No |
| Status: | Active |
| Description: |
Species of fish | Description Source: Author |
| Allowed Values: | sockeye: sockeye | chum: chum | |
Sex
CC ID: 528937
| Seq. Order: | 7 |
|---|---|
| Data Storage Type: | VARCHAR |
| Required: | No |
| Primary Key: | No |
| Status: | Active |
| Description: |
Sex of a specie | Description Source: Author |
| Allowed Values: | male: male | female: female | |
Number of fish analyzed
CC ID: 528938
| Seq. Order: | 8 |
|---|---|
| Data Storage Type: | Unknown |
| Required: | No |
| Primary Key: | No |
| Status: | Active |
| Description: |
Number of fish analyzed | Description Source: Author |
| Allowed Values: | Comments of a sampler |
Fish Length mm
CC ID: 528939
| Seq. Order: | 9 |
|---|---|
| Data Storage Type: | NUMBER |
| Required: | No |
| Primary Key: | No |
| Status: | Active |
| Description: |
Fish Length mm | Description Source: Author |
| Allowed Values: | 495 - 695 |
Weight in Grams
CC ID: 528940
| Seq. Order: | 10 |
|---|---|
| Data Storage Type: | NUMBER |
| Required: | No |
| Primary Key: | No |
| Status: | Active |
| Description: |
Weight in Grams | Description Source: Author |
| Allowed Values: | 1320 - 4510 |
Time Necropsis
CC ID: 528941
| Seq. Order: | 11 |
|---|---|
| Data Storage Type: | NUMBER |
| Required: | No |
| Primary Key: | No |
| Status: | Active |
| Description: |
Time Necropsis | Description Source: Author |
| Allowed Values: | 12:16 AM - 11:45 PM |
Gross Lesions
CC ID: 528942
| Seq. Order: | 12 |
|---|---|
| Data Storage Type: | VARCHAR |
| Required: | No |
| Primary Key: | No |
| Status: | Active |
| Description: |
abnormalities noted by visual examination at gross necropsy in the external or internal appearance | Description Source: Author |
| Allowed Values: | no adipose fin clip: Indication of wild fish | paler flesh, small fish: relatively smaller flesh that was pale pink in color | num. peritoneal: numerous peritoneal nematodes | many perit. nematodes: many nematode worms | |
Tissue type
CC ID: 528943
| Seq. Order: | 13 |
|---|---|
| Data Storage Type: | VARCHAR |
| Required: | No |
| Primary Key: | No |
| Status: | Active |
| Description: |
Fish tissue analyzed | Description Source: Author |
| Allowed Values: | Gill: Fish gill | Kidney: Fish kidney | Liver: Fish liver | |
Parameter
CC ID: 528944
| Seq. Order: | 14 |
|---|---|
| Data Storage Type: | VARCHAR |
| Required: | No |
| Primary Key: | No |
| Status: | Active |
| Description: |
Histopathology parameter (parasite, disease) measured | Description Source: Author |
| Allowed Values: | Gill Loma salmonis (microsporidan): Gill Loma salmonis (microsporidan) | Gill Microaneurysms: Gill Microaneurysms | Gill monogenetic trematodes: Gill monogenetic trematodes | Gill no significant lesions: no significant lesions in the gill | Kidney tubular Myxosporidans: Kidney tubular Myxosporidans | Kidney no significant lesions: No significant lesions in the kidney | Liver no significant lesions: No significant lesions in the liver | Liver Peritoneal Nematodes: Liver Peritoneal Nematodes | |
Data
CC ID: 528945
| Seq. Order: | 15 |
|---|---|
| Data Storage Type: | VARCHAR |
| Required: | No |
| Primary Key: | No |
| Status: | Active |
| Description: |
Presence or non-occurrence of histopathology parameters | Description Source: Author |
| Allowed Values: | 1: Parameter observed positively | 0: Parameter observed | |
Catalog Details
| Catalog Item ID: | 40991 |
|---|---|
| GUID: | gov.noaa.nmfs.inport:40991 |
| Metadata Record Created By: | Tyler Christensen |
| Metadata Record Created: | 2017-04-06 10:31+0000 |
| Metadata Record Last Modified By: | SysAdmin InPortAdmin |
| Metadata Record Last Modified: | 2022-08-09 17:11+0000 |
| Metadata Record Published: | 2017-04-07 |
| Owner Org: | NCCOS |
| Metadata Publication Status: | Published Externally |
| Do Not Publish?: | N |
| Metadata Last Review Date: | 2017-04-07 |
| Metadata Review Frequency: | 1 Year |
| Metadata Next Review Date: | 2018-04-07 |