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Item Identification

Title: Data_Table_OfavGenotypes
Short Name: OfavGenotypes Data Table
Status: Completed
Abstract:

This data set includes experiments on fertilization compatibility among spawning corals, Acropora palmata and Orbicella faveolata, in the upper Florida Keys along with supporting information

Entity Information

Entity Type: Spreadsheet
Description:

This data set includes experiments on fertilization compatibility among spawning corals, Acropora palmata and Orbicella faveolata, in the upper Florida Keys. Also includes the multi-locus genotypes identifying individuals in the the parental population for O.faveolata as determined by microsatellite markers described in:

Severance et al. (2004) Mol Ecol Notes 4:74-76

Foster et al. (2007) J Anim Ecol 76:384-391

Data Attributes

Attribute Summary

Rubric Score Primary Key? Name Type Description
100
Site Character Reef Name
100
Tag Character Tag number applied to colony in the field
100
GenetID Character Unique multilocus genotype designation as assigned by Penn State University (Dr. Iliana Baums)
100
MapGenet Character Site-scale genotype designation used by divers in the field; Arbitrary colors are assigned to colonies which are clones of the same genotype (within sites) while 'singleton' designates a unique genotype (i.e. genotype represented by that single colony)
100
Lat Number Latitude of colony
100
Lon Number Longitude of colony
100
11_1 Character First allele for locus 11
100
11_2 Character Second allele of locus 11
100
28_1 Character First allele for locus 28
100
28_2 Character second allele of locus 28
100
4_1 Character First allele for locus 4
100
4_2 Character second allele of locus 4
100
5_1 Character First allele for locus 5
100
5_2 Character second allele of locus 5
100
8_1 Character First allele for locus 8
100
8_2 Character second allele of locus 8

Attribute Details

Site

CC ID: 379088
Seq. Order: 1
Data Storage Type: Character
Max Length: 13
Required: No
Primary Key: No
Status: Active
Description:

Reef Name

Tag

CC ID: 379089
Seq. Order: 2
Data Storage Type: Character
Max Length: 4
Required: No
Primary Key: No
Status: Active
Description:

Tag number applied to colony in the field

GenetID

CC ID: 379090
Seq. Order: 3
Data Storage Type: Character
Max Length: 7
Required: No
Primary Key: No
Status: Active
Description:

Unique multilocus genotype designation as assigned by Penn State University (Dr. Iliana Baums)

MapGenet

CC ID: 379091
Seq. Order: 4
Data Storage Type: Character
Max Length: 9
Required: No
Primary Key: No
Status: Active
Description:

Site-scale genotype designation used by divers in the field; Arbitrary colors are assigned to colonies which are clones of the same genotype (within sites) while 'singleton' designates a unique genotype (i.e. genotype represented by that single colony)

Lat

CC ID: 379092
Seq. Order: 5
Data Storage Type: Number
Max Length: 10
Required: No
Primary Key: No
Status: Active
Description:

Latitude of colony

Lon

CC ID: 379093
Seq. Order: 6
Data Storage Type: Number
Max Length: 10
Required: No
Primary Key: No
Status: Active
Description:

Longitude of colony

11_1

CC ID: 379094
Seq. Order: 7
Data Storage Type: Character
Max Length: 3
Required: No
Primary Key: No
Status: Active
Description:

First allele for locus 11

11_2

CC ID: 379095
Seq. Order: 8
Data Storage Type: Character
Max Length: 3
Required: No
Primary Key: No
Status: Active
Description:

Second allele of locus 11

28_1

CC ID: 379096
Seq. Order: 9
Data Storage Type: Character
Max Length: 3
Required: No
Primary Key: No
Status: Active
Description:

First allele for locus 28

28_2

CC ID: 379097
Seq. Order: 10
Data Storage Type: Character
Max Length: 3
Required: No
Primary Key: No
Status: Active
Description:

second allele of locus 28

4_1

CC ID: 379098
Seq. Order: 11
Data Storage Type: Character
Max Length: 3
Required: No
Primary Key: No
Status: Active
Description:

First allele for locus 4

4_2

CC ID: 379099
Seq. Order: 12
Data Storage Type: Character
Max Length: 3
Required: No
Primary Key: No
Status: Active
Description:

second allele of locus 4

5_1

CC ID: 379100
Seq. Order: 13
Data Storage Type: Character
Max Length: 3
Required: No
Primary Key: No
Status: Active
Description:

First allele for locus 5

5_2

CC ID: 379101
Seq. Order: 14
Data Storage Type: Character
Max Length: 3
Required: No
Primary Key: No
Status: Active
Description:

second allele of locus 5

8_1

CC ID: 379102
Seq. Order: 15
Data Storage Type: Character
Max Length: 3
Required: No
Primary Key: No
Status: Active
Description:

First allele for locus 8

8_2

CC ID: 379103
Seq. Order: 16
Data Storage Type: Character
Max Length: 3
Required: No
Primary Key: No
Status: Active
Description:

second allele of locus 8

Support Roles

Distributor

CC ID: 767804
Date Effective From: 2017
Date Effective To:
Contact (Organization): National Centers for Environmental Information - Silver Spring, Maryland (NCEI-MD)
Address: NOAA/NESDIS E/OC SSMC3, 4th Floor, 1351 East-West Highway
Silver Spring, MD 20910-3282
Phone: (301) 713-3277
Contact Instructions:

Contact by email preferred.

View Historical Support Roles

Distribution Information

Distribution 1

CC ID: 767802
Start Date: 2017
End Date: Present
Download URL: https://www.ncei.noaa.gov/archive/accession/0160349/1.1/data/0-data/30704/CSV/OfavGenotypes/Data_Table_OfavGenotypes.csv
Distributor: National Centers for Environmental Information - Silver Spring, Maryland (NCEI-MD) (2017 - Present)
File Name: Data_Table_OfavGenotypes.csv
File Type: csv (comma-separated values)
Compression: no compression applied
Review Status: Chked Viruses Inapp Content

Catalog Details

Catalog Item ID: 36575
GUID: gov.noaa.nmfs.inport:36575
Metadata Record Created By: David Huddleston
Metadata Record Created: 2017-01-31 09:48+0000
Metadata Record Last Modified By: SysAdmin InPortAdmin
Metadata Record Last Modified: 2022-08-09 17:11+0000
Metadata Record Published: 2022-04-27
Owner Org: SEFSC
Metadata Publication Status: Published Externally
Do Not Publish?: N
Metadata Last Review Date: 2022-04-27
Metadata Review Frequency: 1 Year
Metadata Next Review Date: 2023-04-27