Data_Table_OfavGenotypes
Entity (ENT) | Southeast Fisheries Science Center (SEFSC)GUID: gov.noaa.nmfs.inport:36575 | Updated: October 3, 2024 | Published / External
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Summary
This data set includes experiments on fertilization compatibility among spawning corals, Acropora palmata and Orbicella faveolata, in the upper Florida Keys along with supporting information
DescriptionThis data set includes experiments on fertilization compatibility among spawning corals, Acropora palmata and Orbicella faveolata, in the upper Florida Keys. Also includes the multi-locus genotypes identifying individuals in the the parental population for O.faveolata as determined by microsatellite markers described in:
Severance et al. (2004) Mol Ecol Notes 4:74-76
Foster et al. (2007) J Anim Ecol 76:384-391
Entity Information
Entity Type
Spreadsheet
Data Attribute / Type | Description |
---|---|
Site
Character |
Reef Name |
Tag
Character |
Tag number applied to colony in the field |
GenetID
Character |
Unique multilocus genotype designation as assigned by Penn State University (Dr. Iliana Baums) |
MapGenet
Character |
Site-scale genotype designation used by divers in the field; Arbitrary colors are assigned to colonies which are clones of the same genotype (within sites) while 'singleton' designates a unique genotype (i.e. genotype represented by that single colony) |
Lat
Number |
Latitude of colony |
Lon
Number |
Longitude of colony |
11_1
Character |
First allele for locus 11 |
11_2
Character |
Second allele of locus 11 |
28_1
Character |
First allele for locus 28 |
28_2
Character |
second allele of locus 28 |
4_1
Character |
First allele for locus 4 |
4_2
Character |
second allele of locus 4 |
5_1
Character |
First allele for locus 5 |
5_2
Character |
second allele of locus 5 |
8_1
Character |
First allele for locus 8 |
8_2
Character |
second allele of locus 8 |
Distribution Information
-
CSV - Comma Separated Values (Text)
Child Items
No Child Items for this record.
Contact Information
Distributor
NOAA National Centers for Environmental Information (NCEI)
ncei.info@noaa.gov
NCEI Contact Information
Item Identification
Title: | Data_Table_OfavGenotypes |
---|---|
Short Name: | OfavGenotypes Data Table |
Status: | Completed |
Abstract: |
This data set includes experiments on fertilization compatibility among spawning corals, Acropora palmata and Orbicella faveolata, in the upper Florida Keys along with supporting information |
Entity Information
Entity Type: | Spreadsheet |
---|---|
Description: |
This data set includes experiments on fertilization compatibility among spawning corals, Acropora palmata and Orbicella faveolata, in the upper Florida Keys. Also includes the multi-locus genotypes identifying individuals in the the parental population for O.faveolata as determined by microsatellite markers described in: Severance et al. (2004) Mol Ecol Notes 4:74-76 Foster et al. (2007) J Anim Ecol 76:384-391
|
Data Attributes
Attribute Summary
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Name | Type | Description |
---|---|---|---|---|
100
|
Site | Character | Reef Name | |
100
|
Tag | Character | Tag number applied to colony in the field | |
100
|
GenetID | Character | Unique multilocus genotype designation as assigned by Penn State University (Dr. Iliana Baums) | |
100
|
MapGenet | Character | Site-scale genotype designation used by divers in the field; Arbitrary colors are assigned to colonies which are clones of the same genotype (within sites) while 'singleton' designates a unique genotype (i.e. genotype represented by that single colony) | |
100
|
Lat | Number | Latitude of colony | |
100
|
Lon | Number | Longitude of colony | |
100
|
11_1 | Character | First allele for locus 11 | |
100
|
11_2 | Character | Second allele of locus 11 | |
100
|
28_1 | Character | First allele for locus 28 | |
100
|
28_2 | Character | second allele of locus 28 | |
100
|
4_1 | Character | First allele for locus 4 | |
100
|
4_2 | Character | second allele of locus 4 | |
100
|
5_1 | Character | First allele for locus 5 | |
100
|
5_2 | Character | second allele of locus 5 | |
100
|
8_1 | Character | First allele for locus 8 | |
100
|
8_2 | Character | second allele of locus 8 |
Attribute Details
Site
Seq. Order: | 1 |
---|---|
Data Storage Type: | Character |
Max Length: | 13 |
Required: | No |
Primary Key: | No |
Status: | Active |
Description: |
Reef Name |
Tag
Seq. Order: | 2 |
---|---|
Data Storage Type: | Character |
Max Length: | 4 |
Required: | No |
Primary Key: | No |
Status: | Active |
Description: |
Tag number applied to colony in the field |
GenetID
Seq. Order: | 3 |
---|---|
Data Storage Type: | Character |
Max Length: | 7 |
Required: | No |
Primary Key: | No |
Status: | Active |
Description: |
Unique multilocus genotype designation as assigned by Penn State University (Dr. Iliana Baums) |
MapGenet
Seq. Order: | 4 |
---|---|
Data Storage Type: | Character |
Max Length: | 9 |
Required: | No |
Primary Key: | No |
Status: | Active |
Description: |
Site-scale genotype designation used by divers in the field; Arbitrary colors are assigned to colonies which are clones of the same genotype (within sites) while 'singleton' designates a unique genotype (i.e. genotype represented by that single colony) |
Lat
Seq. Order: | 5 |
---|---|
Data Storage Type: | Number |
Max Length: | 10 |
Required: | No |
Primary Key: | No |
Status: | Active |
Description: |
Latitude of colony |
Lon
Seq. Order: | 6 |
---|---|
Data Storage Type: | Number |
Max Length: | 10 |
Required: | No |
Primary Key: | No |
Status: | Active |
Description: |
Longitude of colony |
11_1
Seq. Order: | 7 |
---|---|
Data Storage Type: | Character |
Max Length: | 3 |
Required: | No |
Primary Key: | No |
Status: | Active |
Description: |
First allele for locus 11 |
11_2
Seq. Order: | 8 |
---|---|
Data Storage Type: | Character |
Max Length: | 3 |
Required: | No |
Primary Key: | No |
Status: | Active |
Description: |
Second allele of locus 11 |
28_1
Seq. Order: | 9 |
---|---|
Data Storage Type: | Character |
Max Length: | 3 |
Required: | No |
Primary Key: | No |
Status: | Active |
Description: |
First allele for locus 28 |
28_2
Seq. Order: | 10 |
---|---|
Data Storage Type: | Character |
Max Length: | 3 |
Required: | No |
Primary Key: | No |
Status: | Active |
Description: |
second allele of locus 28 |
4_1
Seq. Order: | 11 |
---|---|
Data Storage Type: | Character |
Max Length: | 3 |
Required: | No |
Primary Key: | No |
Status: | Active |
Description: |
First allele for locus 4 |
4_2
Seq. Order: | 12 |
---|---|
Data Storage Type: | Character |
Max Length: | 3 |
Required: | No |
Primary Key: | No |
Status: | Active |
Description: |
second allele of locus 4 |
5_1
Seq. Order: | 13 |
---|---|
Data Storage Type: | Character |
Max Length: | 3 |
Required: | No |
Primary Key: | No |
Status: | Active |
Description: |
First allele for locus 5 |
5_2
Seq. Order: | 14 |
---|---|
Data Storage Type: | Character |
Max Length: | 3 |
Required: | No |
Primary Key: | No |
Status: | Active |
Description: |
second allele of locus 5 |
8_1
Seq. Order: | 15 |
---|---|
Data Storage Type: | Character |
Max Length: | 3 |
Required: | No |
Primary Key: | No |
Status: | Active |
Description: |
First allele for locus 8 |
8_2
Seq. Order: | 16 |
---|---|
Data Storage Type: | Character |
Max Length: | 3 |
Required: | No |
Primary Key: | No |
Status: | Active |
Description: |
second allele of locus 8 |
Support Roles
Distributor
Date Effective From: | 2017 |
---|---|
Date Effective To: | |
Contact (Organization): | NOAA National Centers for Environmental Information (NCEI) |
Email Address: | ncei.info@noaa.gov |
URL: | NCEI Contact Information |
Contact Instructions: |
Contact by email preferred. |
Distribution Information
Distribution 1
Start Date: | 2017 |
---|---|
End Date: | Present |
Download URL: | https://www.ncei.noaa.gov/archive/accession/0160349/1.1/data/0-data/30704/CSV/OfavGenotypes/Data_Table_OfavGenotypes.csv |
Distributor: | NOAA National Centers for Environmental Information (NCEI) (2017 - Present) |
File Name: | Data_Table_OfavGenotypes.csv |
File Type (Deprecated): | csv (comma-separated values) |
Distribution Format: | CSV - Comma Separated Values (Text) |
Compression: | Uncompressed |
Review Status: | Chked Viruses Inapp Content |
Catalog Details
Catalog Item ID: | 36575 |
---|---|
GUID: | gov.noaa.nmfs.inport:36575 |
Metadata Record Created By: | David Huddleston |
Metadata Record Created: | 2017-01-31 09:48+0000 |
Metadata Record Last Modified By: | SysAdmin InPortAdmin |
Metadata Record Last Modified: | 2024-10-03 18:16+0000 |
Metadata Record Published: | 2022-04-27 |
Owner Org: | SEFSC |
Metadata Publication Status: | Published Externally |
Do Not Publish?: | N |
Metadata Last Review Date: | 2022-04-27 |
Metadata Review Frequency: | 1 Year |
Metadata Next Review Date: | 2023-04-27 |