Data_Table_OfavGenotypes
Entity (ENT) | Southeast Fisheries Science Center (SEFSC)GUID: gov.noaa.nmfs.inport:36575 | Updated: March 4, 2026 | Published / External
Entity Information
| Entity Type: | Spreadsheet |
|---|---|
| Description: |
This data set includes experiments on fertilization compatibility among spawning corals, Acropora palmata and Orbicella faveolata, in the upper Florida Keys. Also includes the multi-locus genotypes identifying individuals in the the parental population for O.faveolata as determined by microsatellite markers described in: Severance et al. (2004) Mol Ecol Notes 4:74-76 Foster et al. (2007) J Anim Ecol 76:384-391
|
Data Attributes
Attribute Summary
|
|
Name | Type | Description |
|---|---|---|---|---|
|
100
|
Site | Character | Reef Name | |
|
100
|
Tag | Character | Tag number applied to colony in the field | |
|
100
|
GenetID | Character | Unique multilocus genotype designation as assigned by Penn State University (Dr. Iliana Baums) | |
|
100
|
MapGenet | Character | Site-scale genotype designation used by divers in the field; Arbitrary colors are assigned to colonies which are clones of the same genotype (within sites) while 'singleton' designates a unique genotype (i.e. genotype represented by that single colony) | |
|
100
|
Lat | Number | Latitude of colony | |
|
100
|
Lon | Number | Longitude of colony | |
|
100
|
11_1 | Character | First allele for locus 11 | |
|
100
|
11_2 | Character | Second allele of locus 11 | |
|
100
|
28_1 | Character | First allele for locus 28 | |
|
100
|
28_2 | Character | second allele of locus 28 | |
|
100
|
4_1 | Character | First allele for locus 4 | |
|
100
|
4_2 | Character | second allele of locus 4 | |
|
100
|
5_1 | Character | First allele for locus 5 | |
|
100
|
5_2 | Character | second allele of locus 5 | |
|
100
|
8_1 | Character | First allele for locus 8 | |
|
100
|
8_2 | Character | second allele of locus 8 |
Attribute Details
Site
CC ID: 379088
| Seq. Order: | 1 |
|---|---|
| Data Storage Type: | Character |
| Max Length: | 13 |
| Required: | No |
| Primary Key: | No |
| Status: | Active |
| Description: |
Reef Name |
Tag
CC ID: 379089
| Seq. Order: | 2 |
|---|---|
| Data Storage Type: | Character |
| Max Length: | 4 |
| Required: | No |
| Primary Key: | No |
| Status: | Active |
| Description: |
Tag number applied to colony in the field |
GenetID
CC ID: 379090
| Seq. Order: | 3 |
|---|---|
| Data Storage Type: | Character |
| Max Length: | 7 |
| Required: | No |
| Primary Key: | No |
| Status: | Active |
| Description: |
Unique multilocus genotype designation as assigned by Penn State University (Dr. Iliana Baums) |
MapGenet
CC ID: 379091
| Seq. Order: | 4 |
|---|---|
| Data Storage Type: | Character |
| Max Length: | 9 |
| Required: | No |
| Primary Key: | No |
| Status: | Active |
| Description: |
Site-scale genotype designation used by divers in the field; Arbitrary colors are assigned to colonies which are clones of the same genotype (within sites) while 'singleton' designates a unique genotype (i.e. genotype represented by that single colony) |
Lat
CC ID: 379092
| Seq. Order: | 5 |
|---|---|
| Data Storage Type: | Number |
| Max Length: | 10 |
| Required: | No |
| Primary Key: | No |
| Status: | Active |
| Description: |
Latitude of colony |
Lon
CC ID: 379093
| Seq. Order: | 6 |
|---|---|
| Data Storage Type: | Number |
| Max Length: | 10 |
| Required: | No |
| Primary Key: | No |
| Status: | Active |
| Description: |
Longitude of colony |
11_1
CC ID: 379094
| Seq. Order: | 7 |
|---|---|
| Data Storage Type: | Character |
| Max Length: | 3 |
| Required: | No |
| Primary Key: | No |
| Status: | Active |
| Description: |
First allele for locus 11 |
11_2
CC ID: 379095
| Seq. Order: | 8 |
|---|---|
| Data Storage Type: | Character |
| Max Length: | 3 |
| Required: | No |
| Primary Key: | No |
| Status: | Active |
| Description: |
Second allele of locus 11 |
28_1
CC ID: 379096
| Seq. Order: | 9 |
|---|---|
| Data Storage Type: | Character |
| Max Length: | 3 |
| Required: | No |
| Primary Key: | No |
| Status: | Active |
| Description: |
First allele for locus 28 |
28_2
CC ID: 379097
| Seq. Order: | 10 |
|---|---|
| Data Storage Type: | Character |
| Max Length: | 3 |
| Required: | No |
| Primary Key: | No |
| Status: | Active |
| Description: |
second allele of locus 28 |
4_1
CC ID: 379098
| Seq. Order: | 11 |
|---|---|
| Data Storage Type: | Character |
| Max Length: | 3 |
| Required: | No |
| Primary Key: | No |
| Status: | Active |
| Description: |
First allele for locus 4 |
4_2
CC ID: 379099
| Seq. Order: | 12 |
|---|---|
| Data Storage Type: | Character |
| Max Length: | 3 |
| Required: | No |
| Primary Key: | No |
| Status: | Active |
| Description: |
second allele of locus 4 |
5_1
CC ID: 379100
| Seq. Order: | 13 |
|---|---|
| Data Storage Type: | Character |
| Max Length: | 3 |
| Required: | No |
| Primary Key: | No |
| Status: | Active |
| Description: |
First allele for locus 5 |
5_2
CC ID: 379101
| Seq. Order: | 14 |
|---|---|
| Data Storage Type: | Character |
| Max Length: | 3 |
| Required: | No |
| Primary Key: | No |
| Status: | Active |
| Description: |
second allele of locus 5 |
8_1
CC ID: 379102
| Seq. Order: | 15 |
|---|---|
| Data Storage Type: | Character |
| Max Length: | 3 |
| Required: | No |
| Primary Key: | No |
| Status: | Active |
| Description: |
First allele for locus 8 |
8_2
CC ID: 379103
| Seq. Order: | 16 |
|---|---|
| Data Storage Type: | Character |
| Max Length: | 3 |
| Required: | No |
| Primary Key: | No |
| Status: | Active |
| Description: |
second allele of locus 8 |
Support Roles
Distributor
CC ID: 767804
| Date Effective From: | 2017 |
|---|---|
| Date Effective To: | |
| Contact (Organization): | NOAA National Centers for Environmental Information (NCEI) |
| Address: | |
| ROR: | https://ror.org/04r0wrp59 |
| Email Address: | ncei.info@noaa.gov |
| URL: | NCEI Contact Information |
| Contact Instructions: |
Contact by email preferred. |
Distribution Information
Distribution 1
CC ID: 767802
| Download URL: | https://www.ncei.noaa.gov/archive/accession/0160349/1.1/data/0-data/30704/CSV/OfavGenotypes/Data_Table_OfavGenotypes.csv |
|---|---|
| Distributor: | NOAA National Centers for Environmental Information (NCEI) (2017 - Present) |
| File Name: | Data_Table_OfavGenotypes.csv |
| File Type (Deprecated): | csv (comma-separated values) |
| Distribution Format: | CSV - Comma Separated Values (Text) |
| Compression: | Uncompressed |
| Review Status: | Chked Viruses Inapp Content |
Catalog Details
| Catalog Item ID: | 36575 |
|---|---|
| GUID: | gov.noaa.nmfs.inport:36575 |
| Metadata Record Created By: | David Huddleston |
| Metadata Record Created: | 2017-01-31 09:48+0000 |
| Metadata Record Last Modified By: | SysAdmin InPortAdmin |
| Metadata Record Last Modified: | 2026-03-04 19:17+0000 |
| Metadata Record Published: | 2022-04-27 |
| Owner Org: | SEFSC |
| Metadata Publication Status: | Published Externally |
| Do Not Publish?: | N |
| Metadata Last Review Date: | 2022-04-27 |
| Metadata Review Frequency: | 1 Year |
| Metadata Next Review Date: | 2023-04-27 |